Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10]
8,188 sequences; 553,845,420 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq3 304 2e-80
seq1290 300 3e-79
seq5 300 3e-79
seq9 291 1e-76
seq7 291 1e-76
seq4 291 1e-76
seq432 286 6e-75
seq3493 257 3e-66
seq733 179 6e-43
seq5309 114 2e-23
seq1 84.2 3e-14
>seq3
Length=64463019
Score = 304 bits (336), Expect = 2e-80
Identities = 225/260 (87%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19327997 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 19327938
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 19327937 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 19327878
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| || || | || |||| |||||||| | ||||||||||||||| ||||||
Sbjct 19327877 TGCGAAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAAT 19327818
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 19327817 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 19327758
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 19327757 GAAAGAGCTCTCAGTCTGTC 19327738
>seq1290
Length=6132
Score = 300 bits (332), Expect = 3e-79
Identities = 224/260 (86%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5463 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 5404
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||||| | || | | | ||||||| |||||||||| |||
Sbjct 5403 ACCTGTTATTGCCTCAAACTTCCATGGCCTAAACGGCCATAGTCCGTCTAAGAAGCTAGC 5344
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| ||||||
Sbjct 5343 TGCGGAGGGATGGCTCCGCACAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAAT 5284
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5283 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 5224
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 5223 GAAAGAGCTCTCAGTCTGTC 5204
>seq5
Length=59822759
Score = 300 bits (332), Expect = 3e-79
Identities = 224/260 (86%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47012160 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 47012101
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 47012100 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 47012041
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| ||||||
Sbjct 47012040 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAAT 47011981
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47011980 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 47011921
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 47011920 GAAAGAGCTCTCAGTCTGTC 47011901
Score = 295 bits (326), Expect = 1e-77
Identities = 223/260 (86%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47003680 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 47003621
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|||| |||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 47003620 ACCTATTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 47003561
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||||||||||
Sbjct 47003560 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTATCGGAAT 47003501
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 47003500 TAACCAGACAAATCGCTCCACCAACTAAGTACGGCCATGCACCACCACCCATAGAATCAA 47003441
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 47003440 GAAAGAGCTCTCAGTCTGTC 47003421
Score = 291 bits (322), Expect = 1e-76
Identities = 222/260 (85%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46945052 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 46944993
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|| |||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 46944992 ACATGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 46944933
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| |||||
Sbjct 46944932 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAATGGAAT 46944873
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 46944872 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 46944813
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 46944812 GAAAGAGCTCTCAGTCTGTC 46944793
Score = 136 bits (150), Expect = 6e-30
Identities = 123/152 (81%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 54 ATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGA 113
|||||||||||||||||||||||||||||| | | || | | | |||||||||||||||
Sbjct 46931703 ATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGA 46931644
Query 114 AGCCAGCCACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTA 171
||| ||| | | || | || |||| |||||||| | |||||||||||||||
Sbjct 46931643 AGCTAGCTGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTA 46931584
Query 172 TCGGAATTAACCAGACAAATCACTCCACCAAC 203
|||||||||||||||||||| ||||||||||
Sbjct 46931583 ACGGAATTAACCAGACAAATCGCTCCACCAAC 46931552
>seq9
Length=72259479
Score = 291 bits (322), Expect = 1e-76
Identities = 222/260 (85%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 24699157 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCATAG 24699216
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 24699217 ACCTGTTATTGCCTCAAACTTCTGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 24699276
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| ||||||
Sbjct 24699277 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTCAGGTCTCGTTCGTTAACGGAAT 24699336
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 24699337 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 24699396
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 24699397 GAAAGAGCTCTCAGTCTGTC 24699416
>seq7
Length=46770411
Score = 291 bits (322), Expect = 1e-76
Identities = 222/260 (85%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | ||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct 4652617 TACTCGTTGAATACATCAGTGTAGTGCGCATGCGGCCCAGAACATCTAAGGGCATCACAG 4652558
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 4652557 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 4652498
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| ||||||
Sbjct 4652497 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAAT 4652438
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4652437 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 4652378
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 4652377 GAAAGAGCTCTCAGTCTGTC 4652358
Score = 286 bits (316), Expect = 6e-75
Identities = 221/260 (85%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1067206 TACTCGTTGAATACATCAGTGTAGCGCGCATGCGGCCCAGAACATCTAAGGGCATCACAG 1067265
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 1067266 ACCTGTTATTGCCTCAAACTTCTGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 1067325
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| |||||
Sbjct 1067326 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAATGGAAT 1067385
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1067386 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 1067445
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 1067446 GAAAGAGCTCTCAGTCTGTC 1067465
Score = 282 bits (312), Expect = 7e-74
Identities = 220/260 (85%), Gaps = 2/260 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4691885 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 4691944
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | ||| | |||||||||||| |||
Sbjct 4691945 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGTCTATATTTCCTCTAAGAAGCTAGC 4692004
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||| ||| | ||||||||||||||| ||||||
Sbjct 4692005 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGTAGGCTGAGGTCTCGTTCGTTAGCGGAAT 4692064
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 4692065 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCATCACCACCCATAGAATCAA 4692124
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 4692125 GAAAGAGCTCTCAGTCTGTC 4692144
Score = 277 bits (306), Expect = 3e-72
Identities = 210/245 (86%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4596015 TCAGTGTAGCGCGTGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTATTATTGCCTC 4595956
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-T 133
||||||| | | || | | | |||||||||||||||||| ||| | | || | |
Sbjct 4595955 AAACTTCTGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGCTGCGGAGGGATGGCT 4595896
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| |||| |||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 4595895 CCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCG 4595836
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
Sbjct 4595835 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTTAGT 4595776
Query 254 CTGTC 258
|||||
Sbjct 4595775 CTGTC 4595771
Score = 273 bits (302), Expect = 3e-71
Identities = 218/260 (84%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | ||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 25850689 TACTCGTTGAATACATCAATGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCACCACAG 25850630
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 25850629 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAATGGCCATAGTCCCTCTAAGAAGCTAGC 25850570
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||| ||||| |||||||||| | || || |||
Sbjct 25850569 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGTAGGTTGAGGTCTCGTTTGGTAACGAAAT 25850510
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 25850509 TAACTAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 25850450
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 25850449 GAAAGAGCTCTCAGTCTGTC 25850430
Score = 271 bits (300), Expect = 1e-70
Identities = 217/259 (84%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2919327 ACTCGTTGAATACATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 2919386
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 2919387 CCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGCT 2919446
Query 122 ACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| | || | || |||| |||||||| | |||||| |||| ||| |||||||
Sbjct 2919447 GCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTTGTTCATTAACGGAATT 2919506
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2919507 AACCAGATAAATCGCTCCAGCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 2919566
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||| ||| ||
Sbjct 2919567 AAAGAGCTCTCAGTCTATC 2919585
Score = 257 bits (284), Expect = 3e-66
Identities = 193/224 (86%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 37 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC 96
||||||||||||||||||||||||||||||||||||||||||||||| | | || | |
Sbjct 1917332 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGG 1917391
Query 97 CAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGT 154
| |||||||||||||||||| ||| | | || | || |||| ||||||||
Sbjct 1917392 CCATAGTCCCTCTAAGAAGCTAGCTGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGC 1917451
Query 155 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCC 214
| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 1917452 TGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCC 1917511
Query 215 ATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1917512 ATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 1917555
Score = 174 bits (192), Expect = 3e-41
Identities = 150/183 (82%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016521 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1016580
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 1016581 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 1016640
Query 121 CAC-CAACCATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||||| | ||||||||||||||| ||||||
Sbjct 1016641 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAAT 1016700
Query 179 TAA 181
|||
Sbjct 1016701 TAA 1016703
Score = 170 bits (188), Expect = 3e-40
Identities = 197/262 (75%), Gaps = 10/262 (4%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1043205 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1043264
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| ||
Sbjct 1043265 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAG- 1043323
Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| | | | | | | | ||| ||| || | | | ||| || |
Sbjct 1043324 --CTTTTGAAAATTAAAAGTACAAGTTAAAAGGGTA---TTTTTGTAATTACAAAAAAAA 1043378
Query 181 ACC-AGACAAATCACTCC---ACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236
||| || | | | |||||||||||||||||||||||||||||||||||||||
Sbjct 1043379 ACCTAGGGTTGTTTTTGCAAAACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 1043438
Query 237 AAGAAAGAGCTATCAATCTGTC 258
||||||||||| ||| ||||||
Sbjct 1043439 AAGAAAGAGCTCTCAGTCTGTC 1043460
Score = 154 bits (170), Expect = 2e-35
Identities = 106/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1867711 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 1867770
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||||||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 1867771 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 1867830
>seq4
Length=49548238
Score = 291 bits (322), Expect = 1e-76
Identities = 212/243 (87%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 45118579 TCACTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 45118638
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-T 133
|||||||||| | || | | | |||||||||||||||||| ||| | | || | |
Sbjct 45118639 AAACTTCCATGGCCTAAATGGCCATAGTCCCTCTAAGAAGCTAGCTGCGGAGGGATGGCT 45118698
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193
| | ||| |||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 45118699 CCACATAACTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCG 45118758
Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 45118759 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGT 45118818
Query 254 CTG 256
|||
Sbjct 45118819 CTG 45118821
Score = 152 bits (168), Expect = 8e-35
Identities = 135/166 (81%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 42055484 TCAGTGTAGCGCGTGTGCGGCTCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 42055425
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCAC-CAACCATAG-T 133
|||||||| | | || | | | |||||||||||||||| | ||| | | || | |
Sbjct 42055424 AAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAATCTAGCTGCGGAGGGATGGCT 42055365
Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| |||| |||||||| | ||||||||||||||| |||||||
Sbjct 42055364 CCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATT 42055319
>seq432
Length=13724
Score = 286 bits (316), Expect = 6e-75
Identities = 221/260 (85%), Gaps = 2/260 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || | | ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 8697 TACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAGGGGCATCACAG 8638
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
||| ||||||||||||||||||| | | || | | | |||||||||||||||||| |||
Sbjct 8637 ACCAGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAGC 8578
Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
| | || | || |||| |||||| | | ||||||||||||||| ||||||
Sbjct 8577 TGCGGAGGGATGGCTCCGCATAGCTAGTTAGCATGCTGAGGTCTCGTTCGTTAACGGAAT 8518
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 8517 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 8458
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||| ||||||
Sbjct 8457 GAAAGAGCTCTCAGTCTGTC 8438
>seq3493
Length=2198
Score = 257 bits (284), Expect = 3e-66
Identities = 193/224 (86%), Gaps = 2/224 (1%)
Strand=Plus/Minus
Query 37 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGC 96
||||||||||||||||||||||||||||||||||||||||||||||| | | || | |
Sbjct 434 CCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGG 375
Query 97 CAATAGTCCCTCTAAGAAGCCAGCCACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGT 154
| |||||||||||||||||| ||| | | || | || |||| ||||||||
Sbjct 374 CCATAGTCCCTCTAAGAAGCTAGCTGCGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGC 315
Query 155 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCC 214
| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 314 TGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCC 255
Query 215 ATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 254 ATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTC 211
>seq733
Length=9930
Score = 179 bits (198), Expect = 6e-43
Identities = 110/117 (94%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 145 CTATTTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 204
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 205 ACTAAGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAGCTCTCAATCTGTC 261
Score = 179 bits (198), Expect = 6e-43
Identities = 110/117 (94%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 9232 CTATTTAGTAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 9291
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 9292 ACTAAGAACGGCCATGCACCACCACCCACTGAATCAAGAAAGAGCTCTCAATCTGTC 9348
Score = 89.7 bits (98), Expect = 8e-16
Identities = 54/57 (95%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72
|||||||||| |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 8993 TCAGTGTAGCACGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 9049
>seq5309
Length=1492
Score = 114 bits (126), Expect = 2e-23
Identities = 66/68 (97%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 68 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 9
Query 62 CCTGTTAT 69
||||||||
Sbjct 8 CCTGTTAT 1
>seq1
Length=61571842
Score = 84.2 bits (92), Expect = 3e-14
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 23 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 82
|||| || ||||||||||||||| |||| ||||| ||| || |||||||||||||||||
Sbjct 53031766 AGCGTGCTTGCGGCCCAGAACATATAAGAGCATCGTAGATCTATTATTGCCTCAAACTTC 53031825
Query 83 CATTGGCTGGAAGCCAATAGTCCCTCTAA 111
| | | || | | | |||||| ||||||
Sbjct 53031826 CGTGGCCTAAACGGCCATAGTCTCTCTAA 53031854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796736796828
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |