Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq7 401 1e-109 seq4 399 4e-109 seq3 396 5e-108 seq6687 387 2e-105 seq5 383 3e-104 seq432 358 1e-96 seq733 354 1e-95 seq563 264 2e-68 >seq7 Length=46770411 Score = 401 bits (444), Expect = 1e-109 Identities = 266/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 1865531 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1865589 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 1865590 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 1865649 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1865650 ATTCTGCTTCATAATGATAGGAAGAGCCGACATCGAATGATCAAAAAGCAACGTCGCTAT 1865709 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| | Sbjct 1865710 GAACGCTTGGCTGCCACAAGCCAGTTATGCCTGTGGTAACTTTTCTGACACCTCTAGCTT 1865769 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||| | ||| | |||||||||||||||||||| |||||| |||| ||||||| Sbjct 1865770 CAAACTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCA 1865823 Score = 396 bits (438), Expect = 5e-108 Identities = 265/293 (90%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 1039285 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1039343 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 1039344 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 1039403 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1039404 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 1039463 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1039464 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 1039523 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||| | ||| | |||||||||||||||| || |||||| |||| |||||| Sbjct 1039524 CAAACTCCGAAGATCTAAAGGATCGATAGG--ACGCTTTCACGGTTCGTATTC 1039574 Score = 390 bits (432), Expect = 2e-106 Identities = 263/293 (90%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| |||||||| ||| |||||||||||||||||||||||||||||| Sbjct 2186307 TACTAGGTTGAATTACTATTGGGGC-ACGATCATCAGTAGGGTAAAACTAACCTGTCTCA 2186249 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 2186248 TGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 2186189 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||| ||| |||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 2186188 ATTCTGTTTCACAATGATAGGAAGAGCCGACGTCGAAGGATCAAAAAGCAACGTCACTAT 2186129 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 2186128 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTAACACCTCTAGCTT 2186069 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||| | || | |||||||||||||| ||||| |||||| |||| |||||| Sbjct 2186068 CAAACTCTGAAGATCTAAAGGATCGATATGCCACGCTTTCACGGTTCGTATTC 2186016 Score = 387 bits (428), Expect = 2e-105 Identities = 257/284 (90%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| || ||| ||||| ||||||||||||||||||| |||||||| |||||||| Sbjct 2965453 GAATTACTATCATGGC-ACGGTTATCAGTAGGGTAAAACTAAACTGTCTCACGACGGTCT 2965511 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||| |||||||||| |||||||||||||||||| ||| ||||||||||| Sbjct 2965512 AAACCCAGCTCATGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTT 2965571 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2965572 CACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 2965631 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| | || Sbjct 2965632 GCTGCCACAAGCCAGTTATCCCTATGGTAACTTTTCTGACACCTCTAGCTTCAAACTCCG 2965691 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | | |||||||||||||||||||| ||||||||||| |||||| Sbjct 2965692 AAGATCTAAAGGATCGATAGGCCACGCTTTCATGGTTCGTATTC 2965735 Score = 385 bits (426), Expect = 8e-105 Identities = 262/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 4683122 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 4683180 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 | |||||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 4683181 CAATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 4683240 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 4683241 ATTCTGCTTCACAATGATAGGAAGAGCCAACATCGAAGGATCAAAAAGCAACGTCGCTAT 4683300 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 4683301 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 4683360 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||| | ||| | |||||||||||||||||||| |||||| ||| |||||| Sbjct 4683361 TAAACTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACAGTTCGTATTC 4683413 Score = 257 bits (284), Expect = 3e-66 Identities = 169/187 (90%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 ||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 4656435 CCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGATGGATCAAAA 4656376 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4656375 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 4656316 Query 227 GGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTT 286 | |||||||||| ||||| | ||| | |||||||||||||||||||| |||||| |||| Sbjct 4656315 GACACCTCTAGCTTCAAACTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTT 4656256 Query 287 TGTATTC 293 |||||| Sbjct 4656255 CGTATTC 4656249 Score = 230 bits (254), Expect = 4e-58 Identities = 167/192 (87%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 |||||||||| ||| |||||| ||||| | ||||||||||||||||||||| || | Sbjct 2914141 ACAATCCAACACTTGGTGAATTCAGCTTCACAACGATAGGAAGAGCCGACATCGAGGGTT 2914200 Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221 ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||| Sbjct 2914201 CAAAAAGCAACGTCGCTATGAACGCTTGGGTGCCACAAGCCAGTTA-CCCTGTGGAAACT 2914259 Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281 |||||| |||||||||| ||||| | | | | |||||||||||||||||||| |||||| Sbjct 2914260 TTTCTGACACCTCTAGCGTCAAACTCCAAAGATCTAAAGGATCGATAGGCCACGCTTTCA 2914319 Query 282 TGGTTTGTATTC 293 |||| |||||| Sbjct 2914320 CGGTTCGTATTC 2914331 Score = 201 bits (222), Expect = 2e-49 Identities = 131/144 (91%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 2964370 ACATCGAATGATCAAAAAGCAAAGTCACTATGAACGCTTGGCTGCCACAAGCCAGTTATC 2964429 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||||| |||||||||| ||||| | ||| | ||||||||||||||| Sbjct 2964430 CCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAACTCCGAAGATCTAAAGGATCGATAG 2964489 Query 270 GCCACACTTTCATGGTTTGTATTC 293 |||||||||||| || | |||||| Sbjct 2964490 GCCACACTTTCACGGCTCGTATTC 2964513 Score = 152 bits (168), Expect = 9e-35 Identities = 101/111 (91%), Gaps = 1/111 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| ||||||||||||||| |||||||||||||||||| Sbjct 4677118 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGATAAAACTAACCTGTCTCA 4677060 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 4677059 CGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAAC 4677009 Score = 95.1 bits (104), Expect = 2e-17 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 1925931 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 1925989 Query 61 TGACGGTCTAAACC 74 ||||||||||||| Sbjct 1925990 CGACGGTCTAAACC 1926003 >seq4 Length=49548238 Score = 399 bits (442), Expect = 4e-109 Identities = 265/293 (90%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| ||||| |||||||||||||||||||||||||||| Sbjct 45122476 TACTAGGTTGAATTACTATCGTGGC-ACGGTTATCAGTAGGGTAAAACTAACCTGTCTCA 45122418 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||| || Sbjct 45122417 TGACGGTCTAAACCCAACTCACGTTCCCTATTGGTGGGTGAATAATCCAACACTTGGTGA 45122358 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45122357 ATACTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 45122298 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| | Sbjct 45122297 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACGCCTCTAGCTT 45122238 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||| ||||| || |||||||||||||||||||| |||||| |||| |||||| Sbjct 45122237 CAAACTTCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 45122185 Score = 378 bits (418), Expect = 1e-102 Identities = 261/294 (89%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| | ||| |||||||||||||||||||||||||||| Sbjct 45114636 TACTAGGTTGAATTACTATCGTGGC-ATGGTTATCAGTAGGGTAAAACTAACCTGTCTCA 45114694 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||| |||||||||||||||||||||||||| |||||||||||||||||| ||| || Sbjct 45114695 CGACGCTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGA 45114754 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 45114755 ATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCCACGTCGCTGT 45114814 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| | Sbjct 45114815 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATATTTCTGACACCTCTAGCTT 45114874 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||| | ||| | | |||||||||||||||||| ||||||||||| ||||||| Sbjct 45114875 CAAACTCCGAAAGTCAAAAGGATCGATAGGCCACGCTTTCATGGTTCGTATTCA 45114928 >seq3 Length=64463019 Score = 396 bits (438), Expect = 5e-108 Identities = 265/294 (90%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | |||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 19334800 TACTAGGTTGAATTAGTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 19334742 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || |||||||||||||||||||||||||||| |||||||||||||||| | ||| || Sbjct 19334741 CGATGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCACCACTTGGTGA 19334682 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 19334681 ATTCTGCTTCACAATGATAGGAAGACCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 19334622 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 19334621 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 19334562 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||| | ||| | |||||||||||||||||||| ||||||||||| ||||||| Sbjct 19334561 CAAACTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCATGGTTCGTATTCA 19334508 Score = 385 bits (426), Expect = 8e-105 Identities = 262/293 (89%), Gaps = 1/293 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 19320943 TACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 19320885 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||| |||||| |||||||||| |||| ||||||||||||| ||| || Sbjct 19320884 CGACGGTCTAAACCTAGCTCATGTTCCCTATTGGTGGATGAACAATCCAACACTTGGTGA 19320825 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 19320824 ATTTTGCTTCACAATGATAGGAAGAGCCGACTTCGAAGGATCAAAAAGCAACGTCGCTAT 19320765 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 19320764 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTT 19320705 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||| | ||| | |||||||||||||||||||| |||||| |||| |||||| Sbjct 19320704 CAAACTCCGAAGATCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 19320652 >seq6687 Length=1193 Score = 387 bits (428), Expect = 2e-105 Identities = 246/267 (92%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 27 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTC 86 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 10 ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTC 69 Query 87 CCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146 |||||| |||||||||||||||||| ||| |||||||||||| ||||||||||||| Sbjct 70 CCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAG 129 Query 147 CCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 130 CCGACATCGAAGGATCAAAAAGCAACATCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 189 Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 ||||||||||||||||||||| |||||||||| ||||| | ||| | |||||||||||| Sbjct 190 ATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAACTCCGAAGATCTAAAGGATCGA 249 Query 267 TAGGCCACACTTTCATGGTTTGTATTC 293 |||||||| |||||| |||| ||||| Sbjct 250 TAGGCCACGCTTTCACGGTTCATATTC 276 >seq5 Length=59822759 Score = 383 bits (424), Expect = 3e-104 Identities = 241/260 (93%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 46974903 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 46974844 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| Sbjct 46974843 GGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACA 46974784 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46974783 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 46974724 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||||||| ||||| | ||| | |||||||||||| ||||| Sbjct 46974723 GTGGTAACTTTTCTGACACCTCTAGCTTCAAACTCCGAAGATCTAAAGGATCGACAGGCC 46974664 Query 273 ACACTTTCATGGTTTGTATT 292 || ||||||||||| ||||| Sbjct 46974663 ACGCTTTCATGGTTCGTATT 46974644 Score = 372 bits (412), Expect = 5e-101 Identities = 239/261 (92%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||| Sbjct 46893749 ATCAGTAGGGTAGAACTAACCTATCTCACGACGGTCTAAACCCAGCTCACATTCCCTATT 46893690 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| Sbjct 46893689 GGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACA 46893630 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 46893629 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 46893570 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||||||| ||||| | ||| | |||||||||||||||||| Sbjct 46893569 GTGGTAACTTTTCTGACACCTCTAGCTTCAAACTCCGAAGATCTAAAGGATCGATAGGCC 46893510 Query 273 ACACTTTCATGGTTTGTATTC 293 || |||||| |||| |||||| Sbjct 46893509 ACGCTTTCACGGTTCGTATTC 46893489 >seq432 Length=13724 Score = 358 bits (396), Expect = 1e-96 Identities = 236/261 (90%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||| Sbjct 3745 ATCAGTAGGGTAAAACTAACCTGTCTCACGATGGTCTAAACCCAGCTTACGTTCCCTATT 3686 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| Sbjct 3685 GGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACA 3626 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 3625 CCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCATAAGCCAGTTATCCCT 3566 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||||||| ||||| | || | |||||||||| ||||||| Sbjct 3565 GTGGTAACTTTTCTGACACCTCTAGCTTCAAACTCTGAAGATCTAAAGGATCAATAGGCC 3506 Query 273 ACACTTTCATGGTTTGTATTC 293 || |||||| |||| |||||| Sbjct 3505 ACGCTTTCACGGTTCGTATTC 3485 >seq733 Length=9930 Score = 354 bits (392), Expect = 1e-95 Identities = 257/295 (87%), Gaps = 2/295 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||| | ||| |||| |||||||||||||||||||||||||||||| Sbjct 3791 TACTGAGCAGGATTTCTTTTGCAACGACAAGTCATCAGTAGGGTAAAACTAACCTGTCTC 3850 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3851 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGCG 3910 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 || ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3911 AACTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 3970 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 3971 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGAT 4030 Query 240 TCAAA-TTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | || | | |||||||||||||||| | ||||| ||| |||||| Sbjct 4031 TGAAACTCTCAATAATCAAAAGGATCGATAGGCCCCGCTTTCGCGGTCCGTATTC 4085 >seq563 Length=11730 Score = 264 bits (292), Expect = 2e-68 Identities = 222/269 (83%), Gaps = 5/269 (2%) Strand=Plus/Plus Query 2 ACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCAT 61 |||| | ||||||| || | ||| |||||||||||||||||||||||||||||||||| Sbjct 4780 ACTAGGTTGAATTACTATCGCGGC-ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCAC 4838 Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG---GTGAACAATCCAACGCTTACC 118 ||||||||||||| |||||| ||| | |||| |||| |||||||||||||| ||| Sbjct 4839 GACGGTCTAAACCAAGCTCATGTTTCTTATTGGTGGTGGGTGAACAATCCAACACTTGAT 4898 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCC-GACATCGAAGGATCAAAAAGCAACGTCGC 177 |||||||||||| ||||||| ||||||| |||||||||| ||||||| | ||| |||| Sbjct 4899 GAATTCTGCTTCACAATGATAGAAAGAGCCCGACATCGAAGAATCAAAACGTAACATCGC 4958 Query 178 TATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAG 237 ||| || |||||| |||||||||||||||||| || | |||| |||||| | ||||||| Sbjct 4959 TATAAATGCTTGGTTGCCACAAGCCAGTTATCTCTATAGTAAGTTTTCTTACGCCTCTAG 5018 Query 238 CCTCAAATTTCGAGGGACTAAAGGATCGA 266 | | ||| ||||| | |||||||||| Sbjct 5019 CTTTAAACTTCGAAGATGGAAAGGATCGA 5047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854330041728