Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panicum_20hallii_20[genbank_20GCA_5F002211085.1_202017-07-10] 8,188 sequences; 553,845,420 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 1e-14 >seq4 Length=49548238 Score = 86.0 bits (94), Expect = 1e-14 Identities = 100/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| ||||| | | ||||| || || || || || |||||||| ||||| || Sbjct 47418554 CATGGAATGCTTCCT-GAGGAATGTCAACAGATCCGACGCGTTTCATGCGCTTTTTGCCT 47418496 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 ||||||||||||| |||| ||| ||| | | | ||||||||| ||||| |||||| Sbjct 47418495 TCCTTTTGCTTCTCTAGCAACTTCTTCTTCCTAGTAATGTCACCGCCATAGCACTTGGCC 47418436 Query 217 AGTACGTTCTTTCT 230 || || ||||| || Sbjct 47418435 AGAACATTCTTCCT 47418422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838331351808