Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq2 104 1e-20 seq61 95.1 7e-18 >seq2 Length=81761211 Score = 104 bits (114), Expect = 1e-20 Identities = 93/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||| || || ||||| || |||||| | Sbjct 18228704 GAACCCAAAAACTTTGATTTCTCACAAGATGTCGGCGGAGTCCTAAAAGCAACATCTATC 18228763 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| || |||||||||||||||| || Sbjct 18228764 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGATGGTATCTGATCGTCTTTGA 18228820 Score = 104 bits (114), Expect = 1e-20 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| || ||||| ||||||| |||||||||| ||||| || |||||| | Sbjct 19139836 GAACCCTAAAACTTTTATTTCTCACAAGGTGCCGACGGAGTCCTAAAAGCAACATCTGTC 19139895 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||||| |||||||| ||||| |||| |||| | |||||||||||||||||||| Sbjct 19139896 AATCCCTGGTCGGCATCGTTTATGGTTGAGACGAGGACGGTATCTGATCGTCTTC 19139950 Score = 98.7 bits (108), Expect = 6e-19 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||| || ||| |||| || |||||| Sbjct 60392748 GAACCCAAAAACTTTGATTTCTCACAAGGTGTCG-GCGAAGTCCTAAAAGCAACATCCGT 60392806 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| |||| ||| ||||| |||| |||||| |||||||| ||| ||| ||||| Sbjct 60392807 CGATCCCTGGTCGACATCGTTTATGGTTGAGACTAGGACGGTATTTGAACGTTTTCGA 60392864 >seq61 Length=1846253 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||| || ||||| || |||||| || Sbjct 1314212 GAACCCAAAAACTTTGATTTCTCACAAGGTGTCGGCGGAGTCCTAAAAGCAACATCCGCC 1314153 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||| ||| ||||| | || |||| | || ||||||| ||||| ||||| Sbjct 1314152 GATCCCTGGTCGACATCGTTTATGATTTAGACAAGGATGGTATCTAATCGTTTTCGA 1314096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278166185760