Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq5186 338 1e-90 seq2 192 1e-46 seq61 113 8e-23 seq140 78.8 2e-12 seq6 73.4 7e-11 >seq5186 Length=212 Score = 338 bits (374), Expect = 1e-90 Identities = 202/212 (95%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 17 GCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTT 76 ||||||||||||||||| || |||||||||||||||| |||| ||||| ||||||||||| Sbjct 212 GCCTTTCCTTCTGGGGAACCTCATGCCCTTCACTGGGCGTGCTGGGGAACCAGGACTTTT 153 Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 152 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAATA 93 Query 137 ATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 196 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 92 ATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAG 33 Query 197 GGATAGTCGGGGGTGTCAGTATTCAATTGTCA 228 ||||||||||||| ||||||||||| |||| Sbjct 32 GGATAGTCGGGGGCATCAGTATTCAAGCGTCA 1 >seq2 Length=81761211 Score = 192 bits (212), Expect = 1e-46 Identities = 199/254 (78%), Gaps = 5/254 (2%) Strand=Plus/Minus Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATT 125 ||| || |||||||||| ||||||||||| |||||| | ||| ||| | ||||||| Sbjct 19140204 CAGCACCGTTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCCACACTCTAGATACATT 19140145 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGT-TTCTAGGACCGCCGT 184 |||||| |||| | | |||| | |||| ||||| |||||| ||| || | || || Sbjct 19140144 AGCATGTGATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGAG-ATCGGAGT 19140087 Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244 ||||||||| |||||| |||||||| | |||| || |||||||||||||||| || Sbjct 19140086 AATGATTAAGAGGGATGGTCGGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCCTGA 19140027 Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304 |||||| ||||| ||| |||| |||||| || |||||||||||||||||||||| || Sbjct 19140026 ATTTATGAAAGACGAACCACTGTGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGA 19139968 Query 305 ACGAAAGTTAGGGG 318 | ||||||| |||| Sbjct 19139967 ATGAAAGTTGGGGG 19139954 Score = 188 bits (208), Expect = 1e-45 Identities = 190/243 (78%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||| | ||| ||||| | ||||||||||||| Sbjct 18229064 TTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCCATGCTCTGGATACATTAGCATGCG 18229005 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | | |||| | | || ||||| ||||| | ||| || ||||||||||| Sbjct 18229004 ATAACATCACAGGATTT-CAGTCCTATTGAGTTGGCCTTCGGGATCGGAGTAATGATTAA 18228946 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 ||||| |||||||| | |||| || || ||||||||||||||||||||||| | Sbjct 18228945 GAGGGACGGTCGGGGGCATTCATATTTCATAGTTAGAGGTGAAATTCTTGGATTTATGAA 18228886 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||| ||||||||| |||| |||||| Sbjct 18228885 AGACGAACCACTGCGAAAGCATTTGCCAAGGATGTTTCCATTAATCA-AGAACAAAAGTT 18228827 Query 314 AGG 316 || Sbjct 18228826 GGG 18228824 Score = 113 bits (124), Expect = 8e-23 Identities = 182/252 (72%), Gaps = 20/252 (8%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133 |||||| ||| ||| ||||| | ||||| || ||| ||| | ||| |||||||||| Sbjct 60393106 TTACTTAGAAGAAACTAGAGAGCTCAAAACAAGCCAACACTCTAGATAAATTAGCATGGG 60393047 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATT 191 |||| | | | | | |||||||||| ||||||| | ||| | | | ||| | || Sbjct 60393046 ATAACACCACAAAATTT-CGGTTCTATTGTGTTGGTCA-TCGGAATCAGAC-TAAGGGTT 60392990 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATT-----GTCAGAGGTGAAATTCTTGGAT 246 || |||| | ||| || |||||||| ||||||||||||||||||| || Sbjct 60392989 AAGAGGGGCAATCGAA------AGCATTCAATTTCATAGTCAGAGGTGAAATTCTTGAAT 60392936 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| ||||| || || || |||||| || |||| ||||||||||||||||| ||| Sbjct 60392935 TTATGAAAGACGAA-TAATGTGAAAGCATTTGCCAATGATGTTTTCATTAATCA-AAAAC 60392878 Query 307 GAAAGTT-AGGG 317 |||||| |||| Sbjct 60392877 AAAAGTTGAGGG 60392866 >seq61 Length=1846253 Score = 113 bits (124), Expect = 8e-23 Identities = 182/252 (72%), Gaps = 20/252 (8%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGA 133 |||||| ||| ||| ||||| | ||||| || ||| ||| | ||| |||||||||| Sbjct 1313854 TTACTTAGAAGAAACTAGAGAGCTCAAAACAAGCCAACACTCTAGATAAATTAGCATGGG 1313913 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA--CCGCCGTAATGATT 191 |||| | | | | | |||||||||| ||||||| | ||| | | | ||| | || Sbjct 1313914 ATAACACCACAAAATTT-CGGTTCTATTGTGTTGGTCA-TCGGAATCAGAC-TAAGGGTT 1313970 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATT-----GTCAGAGGTGAAATTCTTGGAT 246 || |||| | ||| || |||||||| ||||||||||||||||||| || Sbjct 1313971 AAGAGGGGCAATCGAA------AGCATTCAATTTCATAGTCAGAGGTGAAATTCTTGAAT 1314024 Query 247 TTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAAC 306 |||| ||||| || || || |||||| || |||| ||||||||||||||||| ||| Sbjct 1314025 TTATGAAAGACGAA-TAATGTGAAAGCATTTGCCAATGATGTTTTCATTAATCA-AAAAC 1314082 Query 307 GAAAGTT-AGGG 317 |||||| |||| Sbjct 1314083 AAAAGTTGAGGG 1314094 >seq140 Length=1825301 Score = 78.8 bits (86), Expect = 2e-12 Identities = 77/98 (79%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 221 AATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACC 280 ||| || |||||||||||||||| |||||| ||||| ||| | |||||||||| | Sbjct 535219 AATAGTTAGAGGTGAAATTCTTGAATTTATGAAAGACGAACCGTTACGAAAGCGTTTGTC 535278 Query 281 AAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| ||||||| |||||||| ||| ||||| |||| Sbjct 535279 AAGTATGTTTTTATTAATCA-AGAATAGAAGTTGGGGG 535315 >seq6 Length=2623330 Score = 73.4 bits (80), Expect = 7e-11 Identities = 98/134 (73%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||| ||||| ||| ||| | |||||| | || |||| ||||||| || Sbjct 2331040 GTAATGATTAAGAGGGACAGTTGGGAACATTCATATTCA-TAGTTAGAGATGAAATTTTT 2331098 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 ||||| | || | ||||| ||| ||||| || || ||| ||||||||||||| | Sbjct 2331099 AGATTTTTGAAAAAAGAACTATTGCAAAAGCTTTTTTAAATGATATTTTCATTAATCAAT 2331158 Query 303 GAACGAAAGTTAGG 316 || | ||||| || Sbjct 2331159 -AATGGAAGTTGGG 2331171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914380127232