Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2 453 2e-125 seq509 197 2e-48 seq389 159 6e-37 seq71870 132 8e-29 seq91 86.0 1e-14 >seq2 Length=81761211 Score = 453 bits (502), Expect = 2e-125 Identities = 280/299 (94%), Gaps = 4/299 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| ||||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 31135359 TACTAAGTTGAATTACTATTGCGATAACCTACATCAGTAGGGTAAAACTAACCTGTCTCA 31135418 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31135419 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 31135478 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct 31135479 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTTT 31135538 Query 181 GAACGC----TTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 236 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31135539 GAACGCCAGGCTCGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTA 31135598 Query 237 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 31135599 GCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 31135657 Score = 360 bits (398), Expect = 3e-97 Identities = 237/262 (90%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| || |||||||||||||||||| ||| |||| Sbjct 18233376 CATCAGTAGGGTAAAACTAACCTGTCTCACGATGGTCTAAACCCAGCTCACATTCTCTAT 18233435 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 | |||||||||||||||||| ||| |||||||||||| |||||||||| ||||||| Sbjct 18233436 TGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAATAGCCGAC 18233495 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 18233496 ATCGAAGGATCAAAAAGCAACGTCACAATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 18233555 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||| |||||||||| ||||||| ||| ||||||||||||||||||| Sbjct 18233556 TGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAACGACTAAAGGATCGATAGGC 18233615 Query 272 CACACTTTCATGGTTTGTATTC 293 ||| |||| | ||| |||||| Sbjct 18233616 CACGCTTTGACAGTTCGTATTC 18233637 Score = 347 bits (384), Expect = 2e-93 Identities = 254/293 (87%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | | | ||| |||||||||| |||||||||| |||||||| Sbjct 18191570 TACTATGTTGAATTACTATCGCGAC-ACGATCATCAGTAGAGTAAAACTAATCTGTCTCA 18191628 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||||||||||||| ||||||||||||||||| ||| || Sbjct 18191629 CAACGGTCTAAACCCAGCTCACGTTCCCTATTGATGGGTGAACAATCCAACACTTGGTGA 18191688 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct 18191689 ATTTTGCTTCACAATGATAGGAAGAGCCGACATTGAAGGATTAAAAAGCAACGTCGCTAT 18191748 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 | |||||||||||||||||||||||||||||||||||||||||| || |||||||||| | Sbjct 18191749 GTACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTTTGACACCTCTAGCTT 18191808 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 |||||| | ||||||||||||||||||| || |||||| |||| ||| || Sbjct 18191809 CAAATT--CTGCGACTAAAGGATCGATAGGCAACGCTTTCACGGTTCGTAGTC 18191859 Score = 329 bits (364), Expect = 6e-88 Identities = 232/264 (88%), Gaps = 1/264 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 19144387 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 19144446 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || |||||||||||||||||| ||| |||||||||||| ||||||||||||||| | Sbjct 19144447 TTGGTGGGTGAACAATCCAACACTTTGTGAATTCTGCTTCACAATGATAGGAAGAGCCAA 19144506 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| |||| |||||||||||||||| |||||||| |||||||||||||||||| |||||| Sbjct 19144507 CATTGAAGAATCAAAAAGCAACGTCTCTATGAACACTTGGCTGCCACAAGCCAATTATCC 19144566 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||| | | ||||||||||||||||| ||||||| || ||| ||||||| ||| | Sbjct 19144567 TTGTGAT-ATTTTTCTGGCACCTCTAGATTCAAATTCTGAACTACTGAAGGATCAATAAG 19144625 Query 271 CCACACTTTCATGGTTTGTATTCA 294 |||| |||||| |||| ||||||| Sbjct 19144626 CCACGCTTTCACGGTTCGTATTCA 19144649 Score = 235 bits (260), Expect = 9e-60 Identities = 207/256 (81%), Gaps = 8/256 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||| ||||||||||| || ||||||| |||||||||||| |||||||| |||| Sbjct 4310079 TCATCAGTAGAGTAAAACTAACATG-CTCATGATGGTCTAAACCCAACTCACGTTTCCTA 4310021 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || |||||||||||||||||| ||| ||||||||||| |||||| ||| ||| || Sbjct 4310020 TTGGTGGGTGAACAATCCAACACTTTGTAAATTCTGCTTCACAATGATATGAATAGCTGA 4309961 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||||||| ||||| ||| || | ||||||||||||| || || || |||||||||| Sbjct 4309960 CATGGAAGGAT-AAAAAACAATGTAGTTATGAACGCTTGGTTGTCATAAACCAGTTATCC 4309902 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||| |||| || ||||||| || ||| | | ||| ||| |||| | Sbjct 4309901 CTGTGGTAATTTTTTTGACACCTCT------AACTTTTCTGACATCAAATGATTGATATG 4309848 Query 271 CCACACTTTCATGGTT 286 ||||||||||||||| Sbjct 4309847 ACACACTTTCATGGTT 4309832 Score = 172 bits (190), Expect = 9e-41 Identities = 126/145 (87%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| || | | | ||| || ||||||||||||||||||||||||||| |||||||| Sbjct 41956505 GAATTACTATCGCGAC-ACGATCCTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 41956447 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||||| Sbjct 41956446 AAACCCAGCTCAGGTTCCCTATTAGTGGGTGAACAACCCAACACTTGATGAATTCTGCTT 41956387 Query 130 CGGTATGATAGGAAGAGCCGACATC 154 | ||||||| ||||||||| ||| Sbjct 41956386 CACAATGATAGTAAGAGCCGATATC 41956362 Score = 152 bits (168), Expect = 9e-35 Identities = 127/154 (82%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | || ||| |||||||||| ||||||||||| ||||||| Sbjct 41952976 TACTATGTTGAATTACTATCGCTGC-ACGATCATCAGTAGAGTAAAACTAACATGTCTCA 41952918 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||| || ||||||| ||| | ||||||||||||||||| ||||| ||| || Sbjct 41952917 CGACGGTCTACACTCAGCTCAGGTTTCTTATTAGTGGGTGAACAACCCAACACTTGATGA 41952858 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 |||||||||| ||||||||||||| ||| ||| Sbjct 41952857 ATTCTGCTTCACAATGATAGGAAGAGTCGATATC 41952824 Score = 114 bits (126), Expect = 2e-23 Identities = 151/207 (73%), Gaps = 3/207 (1%) Strand=Plus/Minus Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97 ||||||||||||||| ||||||| | | ||||| | ||||| ||| |||||||||| Sbjct 70802399 TAGGGTAAAACTAACTTGTCTCAAAAATTTTTAAACATA-CTCACATTCTCTATTAGTGG 70802341 Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157 |||||||| ||||||| |||| ||||| | |||| ||| ||| || || ||| Sbjct 70802340 ATGAACAATGTAACGCTTGGTGAATGTTGCTTGGCAATGAATGGATGAGATGATATTGAA 70802281 Query 158 GGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 217 | | ||||| | | || |||| ||||| || | ||||||||||||| ||| || Sbjct 70802280 GAACAAAAAA--AGCATCACTATATCAACTTGGTTGACTCAAGCCAGTTATCAATGTAGT 70802223 Query 218 AACTTTTCTGGCACCTCTAGCCTCAAA 244 |||||| | ||| |||| | ||||| Sbjct 70802222 AACTTTATTTACACATCTAACTTCAAA 70802196 >seq509 Length=3532775 Score = 197 bits (218), Expect = 2e-48 Identities = 203/265 (77%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||| |||||||| || | |||||||| ||||| ||| ||| Sbjct 1212369 TCATCAGTAGGGTAAAACTAATCTGTCTCACTACATTTTAAACCCAACTCACATTCTCTA 1212428 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || ||||||||||||||||| ||| ||||| | ||| |||||| ||||||| || Sbjct 1212429 TTGGTGGGTGAACAATCCAATAGTTATTGAATTTTTCTTAACAATGATATGAAGAGCTGA 1212488 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| || |||| ||||||| ||| |||||| |||| | ||||||||||||||| Sbjct 1212489 CATCAAATGATC-TAAAGCAATATCGTTATGAATTCTTGAATTTTACAAGCCAGTTATCC 1212547 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||| | | || | ||||||||| | ||||||| ||||||| || Sbjct 1212548 TTGTGGTAAC-------AAAATTGTATCTTCAAATTTCAAATGACTAAATGATCGATGGG 1212600 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 || ||||| ||||||||||||| Sbjct 1212601 TCATGTTTTCACGGTTTGTATTCAC 1212625 >seq389 Length=139175 Score = 159 bits (176), Expect = 6e-37 Identities = 185/249 (74%), Gaps = 14/249 (6%) Strand=Plus/Plus Query 44 AAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAAC 103 ||||||||||| |||| || ||||||| |||||||||||||| ||||| |||||||| | Sbjct 33901 AAAACTAACCT--CTCACGATGGTCTAATCCCAGCTCACGTTCTCTATTGGTGGGTGAGC 33958 Query 104 AATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 |||||||| ||| || ||| |||| |||||| || |||| | ||| |||||||| Sbjct 33959 AATCCAACACTTGATGATATCTACTTCACAATGATAAGACGAGCTAATATCAAAGGATCA 34018 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 ||||| ||| |||||| |||| ||| | |||||| | |||||||||| Sbjct 34019 AAAAGTAAC-----------CGCTTGACTGCTACAGATTAATTATCCTTATGGTAACTTT 34067 Query 224 TCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATG 283 |||| || ||||| || |||| | | |||||| ||||||||||| || ||| | | Sbjct 34068 TCTGACAACTCTACAATC-AATTCCAAATAACTAAATGATCGATAGGCTGCATTTTGACG 34126 Query 284 GTTTGTATT 292 ||| |||| Sbjct 34127 GTTATTATT 34135 >seq71870 Length=122858 Score = 132 bits (146), Expect = 8e-29 Identities = 122/154 (79%), Gaps = 9/154 (6%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| | ||||||| || | | | | | |||||||||||||||| ||||| ||||||| Sbjct 76152 TACTATGTTGAATTACAATCGTGAC-ATGATCATCAGTAGGGTAAAGCTAACATGTCTCA 76094 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||| |||||||||| | ||| |||||||||||||||||| ||| || Sbjct 76093 CGACGGTCTAAACCTAGCTCACGTTTCGAATTTGTGGGTGAACAATCCAACACTTGATGA 76034 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATC 154 |||| | ||||||||||||||||||| Sbjct 76033 ATTC--------AAAGATAGGAAGAGCCGACATC 76008 >seq91 Length=344896 Score = 86.0 bits (94), Expect = 1e-14 Identities = 104/140 (74%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| ||||||||||| |||| | | |||| | | | |||| ||| ||||| |||| | Sbjct 81809 TCATTAGTAGGGTAAA-CTAATTTATTTCATTATGATTTAAATCCAACTCACATTCCTTT 81751 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || ||||||||||||| ||| |||| ||||| | |||| ||||||| || | Sbjct 81750 TTGGTGGGTGAACAATTGAACACTTAGTGAATTTTACTTCATAATGATAG---AAGTAGG 81694 Query 151 CATCGAAGGATCAAAAAGCA 170 |||| ||| || |||||||| Sbjct 81693 CATCAAAGAATTAAAAAGCA 81674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853634594304