Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq89584 123 2e-26 seq190 114 1e-23 seq918 102 7e-20 seq250 87.8 1e-15 >seq89584 Length=148959 Score = 123 bits (136), Expect = 2e-26 Identities = 124/160 (78%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | || || ||| ||||||| ||||||||| Sbjct 104560 CGAGTTGCAGCCTGCAATCCGAACTGAGG-ACGGGTTTTGGAGTTAGCTCACCCTCGCGG 104502 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 104501 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 104442 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 104441 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 104402 Score = 123 bits (136), Expect = 2e-26 Identities = 124/160 (78%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | || || ||| ||||||| ||||||||| Sbjct 130367 CGAGTTGCAGCCTGCAATCCGAACTGAGG-ACGGGTTTTGGAGTTAGCTCACCCTCGCGG 130425 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 130426 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 130485 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 130486 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 130525 >seq190 Length=563350 Score = 114 bits (126), Expect = 1e-23 Identities = 122/160 (76%), Gaps = 1/160 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| | | Sbjct 520548 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACAG 520490 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | || ||| ||| | |||||||| ||||||| ||| |||||||||||||| Sbjct 520489 CCTTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCTAGCCCATAAGGGCCAT 520430 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 520429 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTCTCTCAC 520390 >seq918 Length=552870 Score = 102 bits (112), Expect = 7e-20 Identities = 115/153 (75%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | || || ||| ||||||| |||||||| Sbjct 551638 CGAGTTGCAGTCTGCAATCCGAACTGAGG-ACGGGTTTTGGAGTTAGCTCACCCTCGCGT 551696 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| ||||||| | ||| ||| |||| |||||||| || Sbjct 551697 GATCGCGACCCTTTGTCCCGACCATTGCAGCACGAGTGTCGCCCAGGGCATAAGGGGCAA 551756 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGT 154 || ||||||| ||||||| |||||||||||||| Sbjct 551757 GATGACTTGATGTCATCCTCACCTTCCTCCGGT 551789 >seq250 Length=1658294 Score = 87.8 bits (96), Expect = 1e-15 Identities = 113/155 (73%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||||||| | || || ||| ||||||| |||||||| Sbjct 1648269 CGAGTTGCAGCCTGAAATCCGGACTAAG-GACGGGTTTTGGAGTTAGCTCACCCTCGCGA 1648327 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| || | | | ||||||| || |||| |||| |||||||| ||| Sbjct 1648328 GATCGCGACCTTTTATCCCGCTCATTGTAGCACATGTGTCGCCCAGGGCATAAGGGGCAT 1648387 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 || | ||| | ||||||| ||||||||| |||||| Sbjct 1648388 GATGGCTTAATGTCATCCTCACCTTCCTTCGGTTT 1648422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415638976480