Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq89584 167 4e-39 seq1010 129 1e-27 seq124 82.4 1e-13 >seq89584 Length=148959 Score = 167 bits (184), Expect = 4e-39 Identities = 208/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 104008 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 103949 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 103948 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 103889 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||||| Sbjct 103888 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTGAAA 103829 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 103828 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 103769 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||||||| || Sbjct 103768 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATA 103724 Score = 167 bits (184), Expect = 4e-39 Identities = 208/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||| | Sbjct 130919 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTT 130978 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||||||||||||||||| ||| | |||||| |||| || | | |||| || Sbjct 130979 CCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAG 131038 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | || | ||||||||||| | ||| || | |||||| Sbjct 131039 CTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTGAAA 131098 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 131099 AGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 131158 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||| ||||||||| ||||||||||||| || Sbjct 131159 CCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATA 131203 >seq1010 Length=1243250 Score = 129 bits (142), Expect = 1e-27 Identities = 181/251 (72%), Gaps = 20/251 (8%) Strand=Plus/Plus Query 44 GCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCC 103 |||||||| ||| |||||| |||| ||||||| |||||||| ||||||||| |||||| Sbjct 789582 GCCTTCGCTTTTGGCGTTCCTTCGTAGATCTACGGATTTCACCCCTACACACGAAATTCC 789641 Query 104 GATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCAT 163 | ||||| |||||||| || ||||| | ||| || ||| | Sbjct 789642 ACTCTCCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCA---------TTCCGCCAGT 789692 Query 164 AGTTTTCACATCTG--ACTTG----CC--TTC-CCGCCTACACGCCCTTTACACCCAATA 214 |||| | || ||||| || ||| |||||||| ||||||||| |||| | Sbjct 789693 --TTTTGGCGACTTGAACTTGAAACCCGATTCACCGCCTACGTGCCCTTTACGCCCAGTC 789750 Query 215 AATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTG 274 | |||| | ||| |||||| || ||| |||||||||||||||||||| ||||||||| | Sbjct 789751 ATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGG 789810 Query 275 GCTTATTCCTC 285 |||| |||||| Sbjct 789811 GCTTCTTCCTC 789821 >seq124 Length=474800 Score = 82.4 bits (90), Expect = 1e-13 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | |||||| |||||| | || |||||| ||| || ||| || ||||| Sbjct 64217 CCACCTACAGACGCTTTACGCCCAATCATTCAGGATAATGCTCGCATCCTTTGTCTTACC 64276 Query 248 GCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| ||||| |||| |||||| || ||||||||||||| || Sbjct 64277 GCGACTGCTAGCACAGAGTTAGACGATGCTTATTCCTCAGATA 64319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828080730064