Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2 302 9e-80 seq61 206 5e-51 seq240 194 3e-47 seq54 116 7e-24 seq1013 107 4e-21 >seq2 Length=81761211 Score = 302 bits (334), Expect = 9e-80 Identities = 259/316 (82%), Gaps = 7/316 (2%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGG--TCGCCGGCTTCTT 77 || ||||||||||||||||||||||||| || | |||||| || | |||||||| Sbjct 16205409 GAACGAGACCTTAACCTGCTAAATAGCCGGGTCGACTTTGGTTGGCTTTTTTGGCTTCTT 16205350 Query 78 AGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 136 |||||||||||| | | || ||||||||||||||||||||||||||||||||||||| Sbjct 16205349 AGAGGGACTATCTACGTTTAGTAGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCC 16205290 Query 137 TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGG 196 ||||||||| |||||||||||||||||| ||||| | |||| ||| || |||||| Sbjct 16205289 TTAGATGTTTTGGGCCGCACGCGCGCTAAACTGATGTATTCAACAAGTATATAGCCTTGG 16205230 Query 197 CC---GGAAGGTCTGGGTAATCTTGT-TAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 || | || | | | ||| | | |||||||||||||||||||||||||||||| Sbjct 16205229 CCCGAGTAATCTTTAGAAAATTTCATCGTGACTCTGTCGTGCTGGGGATAGAGCATTGCA 16205170 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||| ||| Sbjct 16205169 ATTATTGCTCTTCAACGAGGAATTCCTTGTAAGCGTAAGTCATCAGCTTGCGTTGAATAC 16205110 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 16205109 GTCCCTGCCCTTTGTA 16205094 Score = 271 bits (300), Expect = 1e-70 Identities = 223/268 (83%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 64 GTCGCCGGCTTCTTAGAGGGACTAT--CGGCTCAAGCCGATGGAAGTTTGAGGCAATAAC 121 || ||| |||||||||||||||||| | | | | ||| | | ||||||||||||||||| Sbjct 18228225 GTGGCCAGCTTCTTAGAGGGACTATGACCGTTTAGGCC-ACGTAAGTTTGAGGCAATAAC 18228167 Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 || ||||||||| |||||||||||||||||||||| ||||||||||||| | ||||| Sbjct 18228166 AGATCTGTGATGTCCTTAGATGTTCTGGGCCGCACACGCGCTACACTGATGTATTCAACG 18228107 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCGTGCTGGGGA 240 ||| || ||||||||| ||| | |||||||||| ||| | | | ||| |||||| Sbjct 18228106 AGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGGAAAATTTCATTGTGATGGGGA 18228047 Query 241 TAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCA 300 |||| |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||| | Sbjct 18228046 TAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCATCT 18227987 Query 301 CGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||| ||| ||||||||||||||| Sbjct 18227986 CGCGTTGACTACATCCCTGCCCTTTGTA 18227959 Score = 113 bits (124), Expect = 9e-23 Identities = 83/97 (86%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 232 TGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTG 291 || |||||||||| |||||||||| ||| ||||||| ||||||| ||||||||| | | | Sbjct 19223668 TGATGGGGATAGATCATTGCAATTGTTGGTCTTCAATGAGGAATTCCTAGTAAGTGTGAG 19223609 Query 292 TCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||||| | ||| |||| ||||||||||||||||||| Sbjct 19223608 TCATCGACTCGCATTGACTACGTCCCTGCCCTTTGTA 19223572 Score = 107 bits (118), Expect = 4e-21 Identities = 84/98 (86%), Gaps = 3/98 (3%) Strand=Plus/Minus Query 64 GTCGCCGGCTTCTTAGAGGGACTAT--CGGCTCAAGCCGATGGAAGTTTGAGGCAATAAC 121 || ||| |||||||||||||||||| | | | | ||| | | ||||||||||||||||| Sbjct 18228447 GTGGCCAGCTTCTTAGAGGGACTATGACCGTTTAGGCC-ACGTAAGTTTGAGGCAATAAC 18228389 Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCG 159 || ||||||||| |||||||||||||||||||||| || Sbjct 18228388 AGATCTGTGATGTCCTTAGATGTTCTGGGCCGCACACG 18228351 >seq61 Length=1846253 Score = 206 bits (228), Expect = 5e-51 Identities = 205/263 (78%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 68 CCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 || |||||||| ||||| ||| | | | || | | |||| ||||||||||||||||||| Sbjct 1314482 CCAGCTTCTTATAGGGATTATGGTCATTTAGGCAACGGAATTTTGAGGCAATAACAGGTC 1314541 Query 127 TGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTC 186 ||||||||||||||| ||| ||||||||||| |||| |||| | | ||| ||| Sbjct 1314542 TGTGATGCCCTTAGAGGTTTTGGGCCGCACGTGCGCCACACAAATGTATTCAAAGAGCAT 1314601 Query 187 ATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCGTGCTGGGGATAGAG 245 || |||||| || || | | |||||||| ||| | | || || |||||||||| Sbjct 1314602 ATAGCCTTGGTCGACAGACCCGAGTAATCTTTAAAAAATTTCATCATGATGGGGATAGAT 1314661 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||| ||||| ||| ||||||||||||||| |||||||||| || ||||||||| | ||| Sbjct 1314662 CATTACAATTGTTGATCTTCAACGAGGAATTCCTAGTAAGCACGAGTCATCAGCTCACGT 1314721 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||| ||| || ||||||||||| Sbjct 1314722 TGACTACTTCTATGCCCTTTGTA 1314744 >seq240 Length=3221721 Score = 194 bits (214), Expect = 3e-47 Identities = 180/227 (79%), Gaps = 10/227 (4%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||| |||||||||| | | | || | ||| ||||||||||||||||||||||||| Sbjct 2362770 GCTTCTTGGAGGGACTATGGTCGTTTAGACCATGAAAGTTTGAGGCAATAACAGGTCTGT 2362711 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 |||||||||||||||| |||||||||||||||||| ||||| | |||| ||| || Sbjct 2362710 GATGCCCTTAGATGTTTTGGGCCGCACGCGCGCTAAACTGATGTATTCAACAAGTATATA 2362651 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT-GTCGTGCTGGGGATAGAGCAT 248 |||||||| || |||||||| ||| | | ||||| |||||||| | ||| Sbjct 2362650 GCCTTGGCCCGA--------GTAATCTTTAGAAAATTTCATCGTGATGGGGATAAATCAT 2362599 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCAT 295 ||||||| ||| | ||||||||| ||| | ||||||||||| ||||| Sbjct 2362598 TGCAATTGTTGGTTTTCAACGAGAAATTCTTAGTAAGCGCGAGTCAT 2362552 >seq54 Length=3706658 Score = 116 bits (128), Expect = 7e-24 Identities = 184/260 (71%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||| ||||||||||||| | | | | ||| | ||||||||| |||||| | || ||| Sbjct 298541 CTTTTTAGAGGGACTATGGTCATTTATGCCTCAG-AAGTTTGAGTCAATAATAAGTTTGT 298599 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 |||| ||||||||||||||| |||||||| || | ||| | | || ||| || Sbjct 298600 GATGTACTTAGATGTTCTGGGTCGCACGCGTGCAATACTAATGTATTTAAATAGTATATA 298659 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT-GTCGTGCTGGGGATAGAGCAT 248 |||||| || || || ||||||| ||| | | || || || |||||| || Sbjct 298660 GCCTTGGTCGACAGACTCGGTTAATCTTTAGAAATTTTCATCATGATGACGATAGATGAT 298719 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||| ||| | || |||||||||| |||| | || | || |||| | | ||||| Sbjct 298720 TGAAATTGTTGGTTTTAAACGAGGAATTCCTACCATGCACAAGTAATCATCTTGTGTTGA 298779 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||| |||||||| Sbjct 298780 CTATGTCCCTCTCCTTTGTA 298799 Score = 116 bits (128), Expect = 7e-24 Identities = 184/260 (71%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC--TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||| ||||||||||||| | | | | ||| | ||||||||| |||||| | || ||| Sbjct 309139 CTTTTTAGAGGGACTATGGTCATTTATGCCTCAG-AAGTTTGAGTCAATAATAAGTTTGT 309197 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 |||| ||||||||||||||| |||||||| || | ||| | | || ||| || Sbjct 309198 GATGTACTTAGATGTTCTGGGTCGCACGCGTGCAATACTAATGTATTTAAATAGTATATA 309257 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT-GTCGTGCTGGGGATAGAGCAT 248 |||||| || || || ||||||| ||| | | || || || |||||| || Sbjct 309258 GCCTTGGTCGACAGACTCGGTTAATCTTTAGAAATTTTCATCATGATGACGATAGATGAT 309317 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||| ||| | || |||||||||| |||| | || | || |||| | | ||||| Sbjct 309318 TGAAATTGTTGGTTTTAAACGAGGAATTCCTACCATGCACAAGTAATCATCTTGTGTTGA 309377 Query 309 TTACGTCCCTGCCCTTTGTA 328 || |||||| |||||||| Sbjct 309378 CTATGTCCCTCTCCTTTGTA 309397 >seq1013 Length=91576 Score = 107 bits (118), Expect = 4e-21 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| ||| ||||||||||||||| |||| |||||||| ||||||||| |||||||| || Sbjct 11171 AATTGTTGGTCTTCAACGAGGAATTCCTAATAAGCGCGAGTCATCAGCTCGCGTTGACTA 11112 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 11111 CGTCCCTGCCCTTTGTA 11095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946351460352