Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq89584 194 6e-47 seq2 192 2e-46 seq61013 187 8e-45 seq12 138 4e-30 seq57376 111 5e-22 seq444 87.8 6e-15 seq68078 82.4 3e-13 seq54 80.6 9e-13 >seq89584 Length=148959 Score = 194 bits (214), Expect = 6e-47 Identities = 398/582 (68%), Gaps = 40/582 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 107829 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 107888 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 107889 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 107948 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 107949 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 108008 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 108009 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 108063 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 || ||| | | ||| ||||||| | |||||||| |||| | | | Sbjct 108064 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATAC---TAGATA 108118 Query 296 TTACCGC-----GGG-------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCG 337 | ||| | ||| |||||| ||||| | |||| | | | || Sbjct 108119 TGACCCCAAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCG 108178 Query 338 AGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAAC 397 ||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 108179 AGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAG 108236 Query 398 GAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAG 457 || || | ||| ||||||| |||| ||| || | |||||||||| | || |||||| Sbjct 108237 GAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAG 108295 Query 458 TGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTC 517 ||||||| |||||||| ||||| || ||| || || | |||| |||| || Sbjct 108296 TGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATC 108354 Query 518 TACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 | ||||||| ||||||| | | ||| |||||||||||||| Sbjct 108355 TGCCGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 108395 Score = 194 bits (214), Expect = 6e-47 Identities = 398/582 (68%), Gaps = 40/582 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 127098 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 127039 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 127038 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 126979 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 126978 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 126919 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 126918 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 126864 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295 || ||| | | ||| ||||||| | |||||||| |||| | | | Sbjct 126863 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATAC---TAGATA 126809 Query 296 TTACCGC-----GGG-------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCG 337 | ||| | ||| |||||| ||||| | |||| | | | || Sbjct 126808 TGACCCCAAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCG 126749 Query 338 AGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAAC 397 ||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 126748 AGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAG 126691 Query 398 GAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAG 457 || || | ||| ||||||| |||| ||| || | |||||||||| | || |||||| Sbjct 126690 GAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAG 126632 Query 458 TGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTC 517 ||||||| |||||||| ||||| || ||| || || | |||| |||| || Sbjct 126631 TGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATC 126573 Query 518 TACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 | ||||||| ||||||| | | ||| |||||||||||||| Sbjct 126572 TGCCGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 126532 >seq2 Length=81761211 Score = 192 bits (212), Expect = 2e-46 Identities = 398/579 (69%), Gaps = 34/579 (6%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 15188525 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 15188466 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||| | ||| Sbjct 15188465 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGGAGAATC 15188406 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 15188405 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 15188346 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 15188345 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 15188291 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--GC-ATCA 292 || ||| | | ||| ||||||| | |||||||| |||| | || || | Sbjct 15188290 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGCTATGA 15188233 Query 293 -----------GTTTTACCGCGG-GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGA 340 | | | ||| |||||| ||||| | |||| | | | ||||| Sbjct 15188232 CCCCAAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGA 15188173 Query 341 GGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAA 400 || || | ||||| | ||||||||||||| ||||||| ||| ||| | | || || Sbjct 15188172 GGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAG 15188115 Query 401 GTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGC 460 || | ||| ||||||| |||| ||| || | |||||||||| | || ||||||||| Sbjct 15188114 GTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGC 15188056 Query 461 GTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTAC 520 |||| |||||||| ||||| || ||| || || | |||| |||| ||| | Sbjct 15188055 GTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTGC 15187997 Query 521 CGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 |||||| ||||||| | | ||| |||||||||||||| Sbjct 15187996 CGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 15187959 Score = 82.4 bits (90), Expect = 3e-13 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 39815837 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 39815896 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || | |||||||||||| ||| |||||||| ||| Sbjct 39815897 ACCAGGATGAAGCTTAGGTGAAACTAAGTAGAGGTCCGAACCGACTGATGTTGAAGAATC 39815956 Query 122 AGGGG 126 || || Sbjct 39815957 AGCGG 39815961 >seq61013 Length=487731 Score = 187 bits (206), Expect = 8e-45 Identities = 394/580 (68%), Gaps = 36/580 (6%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||| | ||| ||| | | |||||||| | |||||||| ||||| Sbjct 142712 CGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 142771 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 142772 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 142831 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 142832 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 142891 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATC---ACCATCGGGGGTAGAGCACTGTTAT 238 |||||| || || | || || | | || | ||| || ||||||||| Sbjct 142892 CCGAAATGCGTTGAG---GCGCAGTAATTGACTGGACATTTAGGGTTAAAGCACTGTTTC 142948 Query 239 GG-CTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTT 297 || | || | | ||| ||||||| | |||||||| |||| | | | | Sbjct 142949 GGTGTGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATAC---TAGATATG 143003 Query 298 ACCGC-----GGG-------------AGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAG 339 ||| | ||| |||||| ||||| | |||| | | | |||| Sbjct 143004 ACCCCAAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAG 143063 Query 340 AGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGA 399 ||| || | ||||| | ||||||||||||||||||||| ||| ||| | | || || Sbjct 143064 AGGGAAACAGCCCGGATCACCAGCTAAGGCCCCGAAATGACCGCTCAGTGATA--AAGGA 143121 Query 400 AGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTG 459 || | ||| ||||||| |||| ||| || | |||||||||| | || |||||||| Sbjct 143122 GGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTG 143180 Query 460 CGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTA 519 ||||| |||||||| ||||| || ||| || || | |||| |||| ||| Sbjct 143181 CGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGATCTG 143239 Query 520 CCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 ||||||| ||||||| | | ||| |||||||||||||| Sbjct 143240 CCGAAGCTGTGGGAT-GTCAAAATGCATCGGTAGGGGAGC 143278 >seq12 Length=602945 Score = 138 bits (152), Expect = 4e-30 Identities = 142/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 564385 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 564326 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 564325 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 564266 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 564265 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 564206 Query 182 CCGAAA 187 |||||| Sbjct 564205 CCGAAA 564200 >seq57376 Length=5959 Score = 111 bits (122), Expect = 5e-22 Identities = 180/253 (71%), Gaps = 6/253 (2%) Strand=Plus/Plus Query 307 GTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAA 366 ||||| ||||| | |||| | | | ||||||| || || ||||| | ||||||| Sbjct 4471 GTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAACCCGGATCACCAGCTAA 4530 Query 367 GGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATG 426 |||||| ||||||| ||| ||| | | || || || | ||| ||||||| | || | Sbjct 4531 GGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGCAGAGACAGCCAAGAGG 4588 Query 427 TTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAGGAGTCG 486 || || | |||||||||| | || ||||||||||||| |||||||| ||||| || Sbjct 4589 TTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCACTGATCGAGCGCTCT 4647 Query 487 GGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGGGATCATTTATATG-A 545 ||| || || | | || |||| ||| ||||||| ||||||| | | ||| | Sbjct 4648 TGCGCCGAAGATTAACTGG-GCTAAGCGATCTGCCGAAGCTGTGGGAT-GTCAAAATGCA 4705 Query 546 TCGGTAGGGGAGC 558 |||||||| |||| Sbjct 4706 TCGGTAGGAGAGC 4718 >seq444 Length=387192 Score = 87.8 bits (96), Expect = 6e-15 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||| | | |||||||| ||| ||| ||||||| | || | || ||||| Sbjct 289837 GACCCGAACCTAGGTGATCTATTTATGACCATGATGAAGCTTGAGTGAAACTAAGTGGAG 289778 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 |||||||| | | |||||||| ||| | |||||||||||| ||||||| ||| || | Sbjct 289777 GTCCGAACTGATTGATGTTGAAGAATCAACCGATGAGCTGTGGTTAGGGGTAAAATGCCA 289718 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAA 187 | ||| || || |||||||| |||||| Sbjct 289717 CTCCAACCCAGAGCTACTTGGTTCTCCCCGAAA 289685 >seq68078 Length=22722 Score = 82.4 bits (90), Expect = 3e-13 Identities = 82/105 (78%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 97 CCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAA 156 ||||||| | ||||||| | |||| |||| || ||||| ||||||||||||| || Sbjct 12785 CCGAACCTATGAATGTTGCAGAATTCTGGGAGGAATTGTGGTAAGGGGTGAAAGGCCAAT 12726 Query 157 CAAACTTGGA-AATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200 | ||||| || ||||||||| ||| ||||| ||||||| |||| Sbjct 12725 CTAACTTAGATGATAGCTGGTATTCTACGAAACCTATTTAAGTAG 12681 >seq54 Length=3706658 Score = 80.6 bits (88), Expect = 9e-13 Identities = 89/119 (75%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 13 AGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAA 72 ||||||| | | ||| | | |||||||| | |||||||| ||||| |||||||||| Sbjct 1746678 AGGGCGATTGACACTGCTTATGGACCCGAACCTGGGTGATCTAACCATGACCAGGATGAA 1746737 Query 73 GGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAG 131 | | ||| | || |||||||| ||||| ||| |||||||| ||| | ||||||| Sbjct 1746738 GCTTGGGTGAAACTAAGTGGAGGTCTGAACCGACTGATGTTGAAGAATCAACGGATGAG 1746796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1688086388736