Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq89584 201 4e-49 seq1006 172 2e-40 seq90 132 2e-28 seq1306 120 1e-24 seq61013 104 8e-20 seq70034 80.6 9e-13 >seq89584 Length=148959 Score = 201 bits (222), Expect = 4e-49 Identities = 394/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 109562 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 109503 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| ||||||||||||| |||||||||| | || |||||| Sbjct 109502 GTCCGGCCCGAGGAAACCTTTGCGCGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 109444 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || | || |||||||||| || Sbjct 109443 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTTCTGACACAAGGTTAGAATTC 109384 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || | || | |||| | Sbjct 109383 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGCAAG-GAGGCCT--T 109327 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 109326 CTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTA 109269 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 109268 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 109209 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 109208 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 109150 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 109149 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 109090 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || | | |||| | ||| ||||| Sbjct 109089 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 109036 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 109035 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 109006 Score = 201 bits (222), Expect = 4e-49 Identities = 394/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 125365 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 125424 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| ||||||||||||| |||||||||| | || |||||| Sbjct 125425 GTCCGGCCCGAGGAAACCTTTGCGCGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 125483 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || | || |||||||||| || Sbjct 125484 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTTCTGACACAAGGTTAGAATTC 125543 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || | || | |||| | Sbjct 125544 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGCAAG-GAGGCCT--T 125600 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 125601 CTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTA 125658 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 125659 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 125718 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 125719 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 125777 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 125778 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 125837 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || | | |||| | ||| ||||| Sbjct 125838 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 125891 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 125892 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 125921 >seq1006 Length=94461 Score = 172 bits (190), Expect = 2e-40 Identities = 325/467 (70%), Gaps = 17/467 (4%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 22608 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 22667 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| ||||||||||||| |||||||||| | || |||||| Sbjct 22668 GTCCGGCCCGAGGAAACCTTTGCGCGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 22726 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || | || |||||||||| || Sbjct 22727 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTTCTGACACAAGGTTAGAATTC 22786 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || | || | |||| | Sbjct 22787 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGCAAG-GAGGCCT--T 22843 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 22844 CTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTA 22901 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 22902 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 22961 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 22962 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 23020 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTAC 457 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 23021 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTAC 23067 >seq90 Length=2097416 Score = 132 bits (146), Expect = 2e-28 Identities = 85/93 (91%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 387 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATG 446 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1970588 CGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACC 1970529 Query 447 GTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 ||||||||||| |||||||| || |||||||| Sbjct 1970528 GTTATAGTTACGGCCGCCGTTCACCGGGGCTTC 1970496 >seq1306 Length=495785 Score = 120 bits (132), Expect = 1e-24 Identities = 103/125 (82%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||| ||| ||||| Sbjct 491170 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCATGCGGGTCG 491112 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| | Sbjct 491111 GAACTTACCCGATAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGTCGCCGTTCA 491052 Query 470 CTGGG 474 ||||| Sbjct 491051 CTGGG 491047 >seq61013 Length=487731 Score = 104 bits (114), Expect = 8e-20 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 389 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGT 448 |||| || ||||||| | || |||||| ||||||||| |||||||||||||||||| || Sbjct 143983 TTACCCCTTTCGTGCGGATCAGAACTTCCCCGACAAGAAATTTCGCTACCTTAGGACCGT 143924 Query 449 TATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 ||||||||| ||||||| || ||||||||| Sbjct 143923 TATAGTTACGGTCGCCGTTCACCGGGGCTTCA 143892 >seq70034 Length=501258 Score = 80.6 bits (88), Expect = 9e-13 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 227574 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 227633 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGG 104 || | | |||| |||||||| ||||||||||||| ||||||| Sbjct 227634 GTCCGGCCCGAGGAAACCTTTGCGCGCCTCCGTTACCTTTTGGG 227677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1700874921984