Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq89584 127 4e-27 seq1010 116 8e-24 seq935 113 1e-22 >seq89584 Length=148959 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 103764 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 103716 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 103715 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 103663 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 103662 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 103603 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | || |||| || | ||| || Sbjct 103602 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 103543 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 103542 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 103504 Score = 127 bits (140), Expect = 4e-27 Identities = 195/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 131163 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 131211 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 131212 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 131264 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 131265 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 131324 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | || |||| || | ||| || Sbjct 131325 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 131384 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 131385 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 131423 >seq1010 Length=1243250 Score = 116 bits (128), Expect = 8e-24 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 789874 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 789933 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 789934 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 789993 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || |||||||||| || Sbjct 789994 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACTAC 790053 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 790054 GCAGGCTCATCAAACAGCG 790072 >seq935 Length=1333062 Score = 113 bits (124), Expect = 1e-22 Identities = 145/199 (73%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | ||||| ||| ||||| | | ||| |||| || Sbjct 992002 AAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTT 991944 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||| | || ||||| |||||||||||||||||||||| ||| ||||||||||| Sbjct 991943 TCGCCCATAGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAG 991884 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTT 260 | ||| ||||| || | || |||| || | ||| ||| | | || ||| || || Sbjct 991883 TCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATT 991824 Query 261 ACCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 991823 GCCTCACCAACTAGCTAAT 991805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067842526208