Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq293 154 1e-32 seq36 152 4e-32 >seq293 Length=413263 Score = 154 bits (170), Expect = 1e-32 Identities = 553/852 (65%), Gaps = 17/852 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 |||||| |||||||| || || || || || |||||||| | ||| ||||||||| | Sbjct 226544 ATTTGGGAGATGTACAAGAAAGCAGAGGCCTCTTTCTGGACTGCGGAAGAGGTCGATCTC 226603 Query 61147 TCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGTGAACAAC---ATTTCATTAAA 61203 || ||||| | | ||||| | | | ||| | | | || || | Sbjct 226604 TCACAAGACGTTCGGCAATGGGATCACACCCTCACCTCTGACGAGCGCCACTTTATCACC 226663 Query 61204 CATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGT 61263 | || |||| ||||| |||||||| || |||||||| ||||| | | ||| Sbjct 226664 TACGTCCTGGCCTTCTTCGCCGCTTCTGATGGTATCGTGCTGGAGAACCTCGCCGGACGC 226723 Query 61264 TTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATG 61323 ||| || ||||| ||| | |||||||||| |||||| ||||||||||| ||||| Sbjct 226724 TTCATGCGAGAGGTTCAACTTCCGGAGGCGCGCGCTTTCTATGGCTTCCAGATCGCCATC 226783 Query 61324 GAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA-GCGGGC 61382 || || | ||||| |||||||| ||| ||||| |||| || ||||||| ||| | | Sbjct 226784 GAAAACATTCACTCCGAGATGTATAGTCTTCTCCTCGAGACCTACATCAAGGACTCCACC 226843 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 | || | | || ||| |||||||| || |||| || || || || | Sbjct 226844 GAAAAATCCAATCTTTTTC-GCGCCATCGAAACCGTACCCTGCGTCGCCCGTAAGGCTCA 226902 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATT 61502 ||||| | ||||| | | | | |||||| ||| || | || || || Sbjct 226903 GTGGGCACTGCGCTGGATTGAC---GCCTCTGAATCATTTGCTGAGCGGATTCTCGCTTT 226959 Query 61503 TGCGGTGGTCGAGGGTGTATTTTTCAGTGG-ATCGTTTGCCGCAATCTTTTGGTTGAAGA 61561 |||| ||||| ||| | || ||| || | | | || ||| ||||| ||| | |||| Sbjct 226960 TGCGTGCGTCGAAGGTATTTTCTTCTCCGGCAGCTTCTG-CGCCATCTTCTGGCTCAAGA 227018 Query 61562 AACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCA 61621 | || || | ||||| ||||| || || || ||| | || || || |||||||| Sbjct 227019 AGCGCGGTTTGATGCCAGGTCTCACTTTTTCTAACGAGCTCATCTCTCGTGACGAGGGAC 227078 Query 61622 TGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGG 61681 | || || || ||||| || || | | || |||| | || ||||||| Sbjct 227079 TCCACTGCGACTTTGC---TTGCCTTCTGTATAGCCTTCTGATCAACAAGATTTCGGAGG 227135 Query 61682 AGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACG 61741 || | || | ||||||||| || || ||| ||| ||| |||||||| | ||| | Sbjct 227136 AGAGGGTTCGGGAGATTGTTGCCGATGCTGTAGATATTGAAAAGGAATTTGTTTGTGATG 227195 Query 61742 CTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTG 61801 | | ||| | | || | || ||||| | |||||| | ||||||||||| | Sbjct 227196 CACTCCCCTGCGCTCTTGTGGGGATGAACGCAGATCTAATGAGCCGCTATATTGAATTCG 227255 Query 61802 TTGCCGACCGTC-TGTTGGTCGATTTGGG-TATGAAGCGGATCTATAATACGAAAAACCC 61859 | || || || | |||||| | | |||| |||| | ||| ||| | || || Sbjct 227256 TGGCAGATCGGCTTGTTGG-AGCTCTGGGCTATG-ACAAGATGTATGGTGTATCGAATCC 227313 Query 61860 ATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||||| ||||| | || |||||| | || ||||| ||||| || ||||| | || Sbjct 227314 ATTTGATTGGATGGAACTCATCTCGCTGCAGGGTAAGACTAATTTCTTTGAGAAGAGGGT 227373 Query 61920 AGGCGACTATCA 61931 || || ||||| Sbjct 227374 TGGGGAGTATCA 227385 >seq36 Length=6822877 Score = 152 bits (168), Expect = 4e-32 Identities = 553/852 (65%), Gaps = 44/852 (5%) Strand=Plus/Minus Query 61096 ATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGAC 61155 |||||||| || || ||||| || |||||||| | || || || ||| ||||| |||| Sbjct 1784147 ATGTACAAGAAAGCCGAAGCCTCTTTCTGGACAGCAGAAGAAGTTGATCTGTCCCAAGAT 1784088 Query 61156 ATGAATGACTGGGAGCGTT---TATCGAGCGGTGAACAACATTTCATTAAACATGTGTTG 61212 | ||||| | | | | || |||| |||||| | | || || | Sbjct 1784087 CTCCGCCACTGGAATGAATCCCTCACCTCCGACGAACGGCATTTCGTAACCCACGTTCTC 1784028 Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || ||||| |||||||| ||||| ||||| ||||| | | || ||| || | Sbjct 1784027 GCTTTCTTCGCCGCTTCCGACGGAATCGTTCTAGAGAACCTCGCTGGCCGCTTCATGCGG 1783968 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 ||||| || | |||||||||| |||||| || || ||||| ||||| || || || Sbjct 1783967 GAGGTACAGCTCCCGGAGGCGCGCGCTTTCTATGGATTTCAGATCGCCATCGAAAACATC 1783908 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 ||||| ||||||||||| | || |||| || ||||||| || || || | | Sbjct 1783907 CACTCCGAGATGTACAGCCTGCTTCTCGAAACCTACATCAAAGACTCCGCAGA--GAAAT 1783850 Query 61393 CG--ATTGTTCAATGCCATCGAGA-CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCC 61449 || | ||| |||| ||||||| || | || || || || || || | ||||| Sbjct 1783849 CGCACCTCTTCCATGCTATCGAGACCGTTCCCTGC-GTCGCCCGCAAGGCACAGTGGGCT 1783791 Query 61450 TTCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTG 61509 || |||||| | | | | | | |||| || ||| | || |||||||| Sbjct 1783790 CTCCGCTGGATCGAC---GCCTCCGATTCTTTTGCAGAGCGAATTCTTGCATTTGCTTGC 1783734 Query 61510 GTCGAGGGTGTATTTTTCAGTGGATCGTTT-GCCGCAATCTTTTGGTTGAAGAAACGTGG 61568 || ||||| | || ||| ||| | |||| ||| ||||| ||| ||||||| | || Sbjct 1783733 GTTGAGGGCATCTTCTTCTCTGG-TAGTTTCTGCGCCATCTTCTGGCTGAAGAAGAGAGG 1783675 Query 61569 ACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTG 61628 || ||||| ||||| || || ||| ||| | || || || || |||||| |||| || Sbjct 1783674 GCTAATGCCTGGTCTCACTTTTTCCAACGAGCTTATTTCTCGTGATGAGGGCCTGCACTG 1783615 Query 61629 TGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGT---CCGTCGGAGGAGCG 61685 ||| ||||| | |||| | || |||| | ||| | | || ||||| | Sbjct 1783614 TGACTTTGCGTGTCTGCTGTACA------GTCTGCTCAATAATAAGCTCTCTGAGGATAG 1783561 Query 61686 TGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTT 61745 || | ||||||||| ||| || ||| ||| || ||| ||| | ||||||| Sbjct 1783560 GGTTAGAGAGATTGTTGCTGATGCTGTAGATATAGAGAGGGAGTTTGTTTGTGACGCT-- 1783503 Query 61746 GCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGC 61805 | || | || ||||| || |||||| ||||| || || |||||||| Sbjct 1783502 -------CCTCTTGTGGGGATGAACGCTGATCTAATGAGTCAGTACATAGAGTTTGTTGC 1783450 Query 61806 CGACCGTC-TGTTGGTCGATTTGGGTATG--AAGCGGATCTATAA--TA-CGAAAAACCC 61859 ||| |||| | ||||| || || || | || ||| || | || || || || Sbjct 1783449 CGATCGTCTTCTTGGTGCTTTAGGTTACGGTAA---GATGTACGAGGTATCG---AATCC 1783396 Query 61860 ATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 |||||| | ||||| | ||||| || | || ||||| || || ||||||||| | || Sbjct 1783395 ATTTGACTGGATGGAGCTTATTTCTCTTCAAGGGAAGACAAACTTCTTCGAGAAAAGGGT 1783336 Query 61920 AGGCGACTATCA 61931 || || || || Sbjct 1783335 CGGTGAATACCA 1783324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397133933269760