Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20equestris_20[refseq_20GCF_5F001263595.1_202015-08-07] 89,584 sequences; 1,064,200,343 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq94 87.8 2e-12 >seq94 Length=7737673 Score = 87.8 bits (96), Expect = 2e-12 Identities = 168/246 (68%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 162615 CGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGAT 162674 ||| || || || |||||||| ||| ||||| | || |||| |||||||| | ||||| Sbjct 581527 CGGCATACTCTTTAATCACGAGAGCCCACGCCGTGGGGAGAATTTCGTCACCAGAAAGAT 581586 Query 162675 CGTCCGAGCCTTGTC--CCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTTGGAAAC 162732 | || || |||| ||| || | || || | || | | ||| ||||||||| Sbjct 581587 CACTCGTGC--TGTCGGCCGTATCAAGGTCGGTTTGCAGACCAAGCTATTCCTTGGAAAC 581644 Query 162733 CTCAATGCCCGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATG 162792 || ||| | |||||||| ||| || || || ||||| |||||| ||||| Sbjct 581645 CTATCTGCAGCCAGGGACTGGGGTTTCGCAGGCGATTATGTTGAGGCAATGTGGATGATG 581704 Query 162793 CTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTGGTGAGCAGTATTCTGTAAAG 162852 | ||||| || |||| | ||||||||| | ||||||| || | ||||||| || Sbjct 581705 TTGCAGCAGGACGAGCCTGGGGATTATGTGGTGGCAACTGAGGATTCGCATTCTGTGGAG 581764 Query 162853 GACTTT 162858 || ||| Sbjct 581765 GAGTTT 581770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690684903987840