Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 111 3e-22
seq100388 86.0 1e-14
seq140428 80.6 5e-13
seq65185 75.2 2e-11
>seq148160
Length=982571
Score = 111 bits (122), Expect = 3e-22
Identities = 215/310 (69%), Gaps = 8/310 (3%)
Strand=Plus/Plus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69
|||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| |
Sbjct 811145 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 811203
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||
Sbjct 811204 TCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 811262
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
|| || |||| ||||| || ||||||||| ||| | ||||||| || ||
Sbjct 811263 GGAATCCA--CCGT-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 811318
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||
Sbjct 811319 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 811378
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| |||||||| | |||||| | | ||||||| | | || ||||||||||| |
Sbjct 811379 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 811438
Query 310 CCAATCAAAC 319
||| || |||
Sbjct 811439 CCACTCGAAC 811448
>seq100388
Length=97256
Score = 86.0 bits (94), Expect = 1e-14
Identities = 210/310 (68%), Gaps = 9/310 (3%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69
|||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| |
Sbjct 89962 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 89904
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
|||| ||||||| ||| | |||||||| ||| | | | | || || |||||||
Sbjct 89903 TCTGACCGCGTGCCAGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 89845
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
|| || |||| |||| || ||||||||| ||| | ||||| | || ||
Sbjct 89844 GGAATCCA--CCGT-AGCCATAGAGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTT 89789
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||
Sbjct 89788 ATGGACCCGAACCTAGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 89729
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|| | |||||| | |||||| | | ||||||| | | || ||||||||||| |
Sbjct 89728 GAAGTT-GAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 89670
Query 310 CCAATCAAAC 319
||| ||||||
Sbjct 89669 CCACTCAAAC 89660
>seq140428
Length=342314
Score = 80.6 bits (88), Expect = 5e-13
Identities = 176/255 (69%), Gaps = 18/255 (7%)
Strand=Plus/Minus
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGG-TTAAGG 130
|||| |||||||| ||| | |||||||| ||| | | | | || || || ||||||
Sbjct 91910 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGGTTAAGG 91852
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| || |||| ||||| || ||||||||| ||| | ||||||| ||| ||
Sbjct 91851 GAATCCA--CCGT-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCGA----TTGACACTGC 91799
Query 191 TA---GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAG--TCGCGGTAACGCGT 245
| ||| |||| | |||||||| ||| || |||| ||||| | | | ||| |
Sbjct 91798 TTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGCGAAAC---T 91742
Query 246 GA-TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304
| |||||| |||||||| | |||||| | | ||||||| | | || ||||||||
Sbjct 91741 AAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAACGGATGAGTTGTGGTTAGGGGTG 91682
Query 305 AAAGGCCAATCAAAC 319
||| |||| ||||||
Sbjct 91681 AAATGCCACTCAAAC 91667
>seq65185
Length=254427
Score = 75.2 bits (82), Expect = 2e-11
Identities = 103/143 (72%), Gaps = 1/143 (1%)
Strand=Plus/Plus
Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251
||| ||||||| |||||| ||| ||||||||||||| || | || | ||||
Sbjct 204051 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTCACAGGCCTTGGA 204110
Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311
|||||||||| | || | ||| | |||||||| | || |||||||||||||||
Sbjct 204111 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 204170
Query 312 AATCAAACTGGGAAATAGCTCGT 334
|| ||| | ||| |||||| ||
Sbjct 204171 AACCAAGATCGGATATAGCTGGT 204193
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 971349078528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |