Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq148160 111 3e-22 seq100388 86.0 1e-14 seq140428 80.6 5e-13 seq65185 75.2 2e-11 >seq148160 Length=982571 Score = 111 bits (122), Expect = 3e-22 Identities = 215/310 (69%), Gaps = 8/310 (3%) Strand=Plus/Plus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69 |||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| | Sbjct 811145 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 811203 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 811204 TCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 811262 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || || |||| ||||| || ||||||||| ||| | ||||||| || || Sbjct 811263 GGAATCCA--CCGT-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCGATT-GTCACTGCTT 811318 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 811319 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 811378 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 811379 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 811438 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 811439 CCACTCGAAC 811448 >seq100388 Length=97256 Score = 86.0 bits (94), Expect = 1e-14 Identities = 210/310 (68%), Gaps = 9/310 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGA--GTGATTC 69 |||| |||||||||| | |||| ||| | || ||||| || |||| || ||||| | Sbjct 89962 GGGGAGTGAAATAGAACATGAAACCGTGAGCTCCCAAGCAGTGGGAGGAGAATGTGAT-C 89904 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| ||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 89903 TCTGACCGCGTGCCAGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 89845 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || || |||| |||| || ||||||||| ||| | ||||| | || || Sbjct 89844 GGAATCCA--CCGT-AGCCATAGAGAAAGCGAGTCTTCATAGGGCAATT-GTCACTGCTT 89789 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 89788 ATGGACCCGAACCTAGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 89729 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 || | |||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 89728 GAAGTT-GAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 89670 Query 310 CCAATCAAAC 319 ||| |||||| Sbjct 89669 CCACTCAAAC 89660 >seq140428 Length=342314 Score = 80.6 bits (88), Expect = 5e-13 Identities = 176/255 (69%), Gaps = 18/255 (7%) Strand=Plus/Minus Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGG-TTAAGG 130 |||| |||||||| ||| | |||||||| ||| | | | | || || || |||||| Sbjct 91910 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGGTTAAGG 91852 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | || |||| ||||| || ||||||||| ||| | ||||||| ||| || Sbjct 91851 GAATCCA--CCGT-AGCCGTAGCGAAAGCGAGTCTTCATAGGGCGA----TTGACACTGC 91799 Query 191 TA---GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAG--TCGCGGTAACGCGT 245 | ||| |||| | |||||||| ||| || |||| ||||| | | | ||| | Sbjct 91798 TTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGCGAAAC---T 91742 Query 246 GA-TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 | |||||| |||||||| | |||||| | | ||||||| | | || |||||||| Sbjct 91741 AAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAACGGATGAGTTGTGGTTAGGGGTG 91682 Query 305 AAAGGCCAATCAAAC 319 ||| |||| |||||| Sbjct 91681 AAATGCCACTCAAAC 91667 >seq65185 Length=254427 Score = 75.2 bits (82), Expect = 2e-11 Identities = 103/143 (72%), Gaps = 1/143 (1%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || | || | |||| Sbjct 204051 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTCACAGGCCTTGGA 204110 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 204111 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 204170 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 204171 AACCAAGATCGGATATAGCTGGT 204193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 971349078528