Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq148351 125 4e-27 seq72492 125 4e-27 seq71656 125 4e-27 seq129472 107 1e-21 seq146917 102 5e-20 seq148846 98.7 6e-19 seq134638 98.7 6e-19 seq121058 98.7 6e-19 seq75577 96.9 2e-18 seq123992 93.3 2e-17 seq20165 89.7 3e-16 seq67961 78.8 5e-13 seq5772 77.0 2e-12 >seq148351 Length=359326 Score = 125 bits (138), Expect = 4e-27 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||||| ||||| || |||||| || Sbjct 249141 GAACCCAAAAACTTTGATTTCTCACAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 249200 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 249201 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 249257 >seq72492 Length=11854 Score = 125 bits (138), Expect = 4e-27 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||| | ||||| || |||||| || Sbjct 7092 GAACCCAAAAACTTTGATTTCTCACAAGGTGCTGGCAGAGTCCTAAAAGCAACATCCACC 7151 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 7152 GATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 7208 >seq71656 Length=256660 Score = 125 bits (138), Expect = 4e-27 Identities = 98/117 (84%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| ||||||||| ||||| || |||||| || Sbjct 245715 GAACCCAAAAACTTTGATTTCTCACAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCC 245774 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| |||||||| ||||| |||| |||||| |||||||||||||||||||||| Sbjct 245775 GATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 245831 >seq129472 Length=68642 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| || ||||| ||||||| |||||||||| ||||| || | |||||| | Sbjct 14549 GAACCCTAAAACTTTTATTTCTCACAAGGTGCCGATGGAGTCCTAAAAACAACATCTGTC 14490 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||| ||| ||||| |||| |||| | |||||||||||||||||||||| Sbjct 14489 AATCCCTGGTCGACATCGTTTATGGTTGAGACGAGGACGGTATCTGATCGTCTTCGA 14433 >seq146917 Length=22511 Score = 102 bits (112), Expect = 5e-20 Identities = 95/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCG-AGTCAAAATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||| || ||| |||| || |||||| Sbjct 3810 GAACCCAAAAACTTTGATTTCTCACAAGGTGTCG-GCGAAGTCCTAAAAGCAACATCTGT 3752 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||| |||||||| ||||| |||| |||||| || ||||| |||||||||| || Sbjct 3751 CGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGATGGTATTTGATCGTCTTTGA 3694 >seq148846 Length=236892 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||||||||||| |||||| || ||||| || |||||| || Sbjct 180853 GAACCCAAAAACTTTGATTTCTCACAAGGTGTCGGCGGAGTCCTAAAAGCAACATCCGCC 180912 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||| || | ||| |||| | || |||||| ||||||||||||||||||||| Sbjct 180913 GATCCCTGGTTGACATCATTTATGATTGAGACTAGAACGGTATCTGATCGTCTTCGA 180969 >seq134638 Length=352617 Score = 98.7 bits (108), Expect = 6e-19 Identities = 93/116 (80%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA-AAATGATAACATCGCC 59 |||||| || ||||| ||||||| |||||||| | ||||| ||| || |||||| Sbjct 239834 GAACCCTAAAACTTTTATTTCTCACAAGGTGCCCACGGAGTCCTAAAAGA-AACATCTGT 239892 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 | |||||| |||||||| ||||| |||| |||| | |||| ||||||||||||||| Sbjct 239893 CAATCCCTGGTCGGCATCGTTTATGGTTGAGACGAGGACGATATCTGATCGTCTTC 239948 >seq121058 Length=157067 Score = 98.7 bits (108), Expect = 6e-19 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||| ||||| ||||||||||||| ||||||||| |||| || |||||| || Sbjct 108271 GAATCCAAAAACTTTGATTTCTCACAAGGTGCCGGCGGAGTTTTAAAAGCAACATCCGCC 108330 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTT 114 ||||||| |||| ||| ||||| |||| |||||| ||| |||||||||||| || Sbjct 108331 GATCCCTGGTCGACATCGTTTATGGTTGAGACTAGGACAGTATCTGATCGTTTT 108384 Score = 87.8 bits (96), Expect = 1e-15 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 |||||||| ||||||||||||| ||| ||||| |||| || |||||| ||| Sbjct 104684 AACCCAAAAACTTTGATTTCTCACAAGCTGCCGGCAGAGTTTTAAAAGCAACATCCGCCG 104743 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||| ||| ||||| |||| |||||| ||| |||| ||||||| || || Sbjct 104744 ATCCGTGGTCGACATCGTTTATGGTTGAGACTAGGACAGTATGTGATCGTTTTTGA 104799 >seq75577 Length=15554 Score = 96.9 bits (106), Expect = 2e-18 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 |||||||| | ||||||||||| ||||||||| | |||| || |||||| ||| Sbjct 12282 AACCCAAAAATTTTGATTTCTCACAAGGTGCCGGGGGAGTTGTAAAAGCAACATCCGCCG 12341 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| || | ||| ||||| | || |||||| |||||||||| ||||| ||||| Sbjct 12342 ATCCCTGGTGGACATCGTTTATGATTTAGACTAGGACGGTATCTAATCGTTTTCGA 12397 >seq123992 Length=6243 Score = 93.3 bits (102), Expect = 2e-17 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 2 AACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCG 61 |||||||| | ||||||||||| |||||| || |||| || |||||| ||| Sbjct 2107 AACCCAAAAATTTTGATTTCTCACAAGGTGTCGGTGGAGTTGTAAAAGCAACATCCGCCG 2048 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| |||| ||| ||||| | || |||||| |||||||||| ||||| ||||| Sbjct 2047 ATCCCTGGTCGACATCGTTTATGATTTAGACTAAGACGGTATCTAATCGTTTTCGA 1992 >seq20165 Length=171424 Score = 89.7 bits (98), Expect = 3e-16 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110 |||||| ||||||||| |||||||| ||||| |||| |||||| ||||||||||||||| Sbjct 40156 AACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCG 40097 Query 111 TCTTCGA 117 ||||||| Sbjct 40096 TCTTCGA 40090 >seq67961 Length=569673 Score = 78.8 bits (86), Expect = 5e-13 Identities = 86/112 (77%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 7 AAAGACTTTGATTTCTCGTAAGGTGC-CGAGCGAGTCAAAATGATAACATCGCCCGATCC 65 ||| ||||| ||||||| || |||| || | ||||| || ||||| ||||| Sbjct 212255 AAAAACTTTTATTTCTCACAAAGTGCACGCG-GAGTCCTAAAAGCAACATTTGTCGATCT 212197 Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||| ||| ||||| |||| |||||| |||||||||||||| ||||||| Sbjct 212196 CTGGTCGACATCGTTTATGGTTGAGACTAGGACGGTATCTGATCATCTTCGA 212145 >seq5772 Length=6895 Score = 77.0 bits (84), Expect = 2e-12 Identities = 84/112 (75%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 6 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCC 65 |||| ||||| ||||||| ||||||| ||||| || ||||| ||||| Sbjct 1890 CAAAAACTTTAATTTCTCACAAGGTGCACGCAGAGTCCTAAAAGCAACATTTGTCGATCT 1831 Query 66 CTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||| ||| ||||| ||| |||||| |||||||||||||| ||||||| Sbjct 1830 CTGGTCGACATCGTTTATAGTTGAGACTAGGACGGTATCTGATCATCTTCGA 1779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278010721110