Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 141 1e-31
seq100388 136 5e-30
seq124489 114 2e-23
seq120380 105 9e-21
seq102399 96.9 5e-18
seq99156 87.8 2e-15
seq145850 84.2 3e-14
seq122046 78.8 1e-12
>seq148160
Length=982571
Score = 141 bits (156), Expect = 1e-31
Identities = 176/243 (72%), Gaps = 20/243 (8%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 812499 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 812441
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 812440 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCC-------------- 812395
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
|| || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 812394 ---TTTTTGAGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 812340
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||||||||||||||| |
Sbjct 812339 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 812280
Query 246 GTA 248
|||
Sbjct 812279 GTA 812277
>seq100388
Length=97256
Score = 136 bits (150), Expect = 5e-30
Identities = 175/243 (72%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 88609 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 88667
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 88668 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCC-------------- 88713
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
|| || || ||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 88714 ---TTTTTGAGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 88768
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| |||||||||||| |||||||||||||||| |
Sbjct 88769 TAGAGAGAGTTATCTCGCGCCCCTAGTTATTCTCTACCTACCCACCTGTGTCGGTTTCAG 88828
Query 246 GTA 248
|||
Sbjct 88829 GTA 88831
>seq124489
Length=34561
Score = 114 bits (126), Expect = 2e-23
Identities = 90/108 (83%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 8405 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 8464
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| |||||||||||||||| ||||
Sbjct 8465 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 8512
>seq120380
Length=46297
Score = 105 bits (116), Expect = 9e-21
Identities = 153/211 (73%), Gaps = 14/211 (7%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 35 CCTTCCAGCACCGGGCAGGTGTCAGACTTTATACATCGTGTTACC-ACTTAGCAGAGTCC 93
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | || ||||||
Sbjct 94 TGTGTTTTTAATAAACAGTCGCTACCC-CTGGTATGTGC--CGCTTTCCTAATCAACAGA 150
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || || ||| ||||||||||||||||||| ||||||||||| |||||
Sbjct 151 T--------AGGAG-AGCTCCCATTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 201
Query 186 TAACCACAGTTCACCCGA-ACGCCTTAGTAT 215
| || ||| | ||| |||| ||||||
Sbjct 202 TCGACATGGTTTTCTCGACGCGCCCTAGTAT 232
>seq102399
Length=5968
Score = 96.9 bits (106), Expect = 5e-18
Identities = 167/243 (69%), Gaps = 21/243 (9%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||| | |||| ||||| || |||||| | ||||| | ||| || ||
Sbjct 5788 CCTTCCAGCACTGA-CAGGTGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGATT 5731
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || |||||||| ||
Sbjct 5730 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCC-------------- 5685
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
|| || || |||||||||||| ||||||||||||| |||||||||| |||||
Sbjct 5684 ---TTTTTGAGGAGA--CACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAGTTCCT 5630
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | | | ||| | ||||||||||| ||||||||||| |||| |
Sbjct 5629 TAGAGAGAGTTGTCTTGCGCTCCTAGGAATTCTCTACCTACCCACCTGTGTCAGTTTCGG 5570
Query 246 GTA 248
|||
Sbjct 5569 GTA 5567
>seq99156
Length=695364
Score = 87.8 bits (96), Expect = 2e-15
Identities = 149/216 (69%), Gaps = 19/216 (9%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||| ||| || |||||| | ||||| ||| ||| |||
Sbjct 339200 CCTTCCGGCACTGGGCAGGCGCCAGCCCCCATACATGGTCTTACAA-CTTTGCAGATACC 339142
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || ||||| ||| ||
Sbjct 339141 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGG--ACCCCC----------- 339095
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
|| || || ||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct 339094 ---TTTTTGAGGAG--GCACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAGTTCCT 339040
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTA 221
|| | |||| | | | ||| ||||||||||
Sbjct 339039 TAGAGAAAGTTGTCTCACGCCCCTAGGTATTCTCTA 339004
>seq145850
Length=626778
Score = 84.2 bits (92), Expect = 3e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 473944 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 473885
Query 201 CGAACGCCTTAGTATTCTCTA 221
|| | ||| ||||||||||
Sbjct 473884 CGCGCCCCTAGGTATTCTCTA 473864
>seq122046
Length=166258
Score = 78.8 bits (86), Expect = 1e-12
Identities = 82/108 (76%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||| ||||||||||| ||||||| || |||||| | |||| |
Sbjct 23613 GGCACCCCTTCTCCTAAAGTTACGGGGTTATTTTGCTGAGATCCTTAGAGAGAGTTGTCT 23672
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
| | ||| ||||||||||||| |||| |||||| |||| ||||
Sbjct 23673 TGCGCCCCTAGGTATTCTCTACCTATCCACTTGTGTCAGTTTCGGGTA 23720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693396674677
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |