Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq148160 141 1e-31 seq100388 136 5e-30 seq124489 114 2e-23 seq120380 105 9e-21 seq102399 96.9 5e-18 seq99156 87.8 2e-15 seq145850 84.2 3e-14 seq122046 78.8 1e-12 >seq148160 Length=982571 Score = 141 bits (156), Expect = 1e-31 Identities = 176/243 (72%), Gaps = 20/243 (8%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 812499 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 812441 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 812440 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCC-------------- 812395 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 812394 ---TTTTTGAGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 812340 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| ||||||||||||| |||||||||||||||| | Sbjct 812339 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGG 812280 Query 246 GTA 248 ||| Sbjct 812279 GTA 812277 >seq100388 Length=97256 Score = 136 bits (150), Expect = 5e-30 Identities = 175/243 (72%), Gaps = 20/243 (8%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || |||| Sbjct 88609 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 88667 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 88668 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCC-------------- 88713 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 || || || ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct 88714 ---TTTTTGAGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 88768 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | || | ||| |||||||||||| |||||||||||||||| | Sbjct 88769 TAGAGAGAGTTATCTCGCGCCCCTAGTTATTCTCTACCTACCCACCTGTGTCGGTTTCAG 88828 Query 246 GTA 248 ||| Sbjct 88829 GTA 88831 >seq124489 Length=34561 Score = 114 bits (126), Expect = 2e-23 Identities = 90/108 (83%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| ||||||| | |||| | Sbjct 8405 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 8464 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 || | ||| ||||||||||||| |||||||||||||||| |||| Sbjct 8465 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTTCGGGTA 8512 >seq120380 Length=46297 Score = 105 bits (116), Expect = 9e-21 Identities = 153/211 (73%), Gaps = 14/211 (7%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 35 CCTTCCAGCACCGGGCAGGTGTCAGACTTTATACATCGTGTTACC-ACTTAGCAGAGTCC 93 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | || |||||| Sbjct 94 TGTGTTTTTAATAAACAGTCGCTACCC-CTGGTATGTGC--CGCTTTCCTAATCAACAGA 150 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || || ||| ||||||||||||||||||| ||||||||||| ||||| Sbjct 151 T--------AGGAG-AGCTCCCATTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 201 Query 186 TAACCACAGTTCACCCGA-ACGCCTTAGTAT 215 | || ||| | ||| |||| |||||| Sbjct 202 TCGACATGGTTTTCTCGACGCGCCCTAGTAT 232 >seq102399 Length=5968 Score = 96.9 bits (106), Expect = 5e-18 Identities = 167/243 (69%), Gaps = 21/243 (9%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||| | |||| ||||| || |||||| | ||||| | ||| || || Sbjct 5788 CCTTCCAGCACTGA-CAGGTGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGATT 5731 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || |||||||| || Sbjct 5730 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCC-------------- 5685 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 || || || |||||||||||| ||||||||||||| |||||||||| ||||| Sbjct 5684 ---TTTTTGAGGAGA--CACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAGTTCCT 5630 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 || | |||| | | | ||| | ||||||||||| ||||||||||| |||| | Sbjct 5629 TAGAGAGAGTTGTCTTGCGCTCCTAGGAATTCTCTACCTACCCACCTGTGTCAGTTTCGG 5570 Query 246 GTA 248 ||| Sbjct 5569 GTA 5567 >seq99156 Length=695364 Score = 87.8 bits (96), Expect = 2e-15 Identities = 149/216 (69%), Gaps = 19/216 (9%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||| ||||||||| ||| || |||||| | ||||| ||| ||| ||| Sbjct 339200 CCTTCCGGCACTGGGCAGGCGCCAGCCCCCATACATGGTCTTACAA-CTTTGCAGATACC 339142 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 ||||||||| |||||||||||| || || ||||| ||| || Sbjct 339141 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGG--ACCCCC----------- 339095 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 || || || ||||||||||||| ||||||||||||| |||||||||| ||||| Sbjct 339094 ---TTTTTGAGGAG--GCACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAGTTCCT 339040 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTA 221 || | |||| | | | ||| |||||||||| Sbjct 339039 TAGAGAAAGTTGTCTCACGCCCCTAGGTATTCTCTA 339004 >seq145850 Length=626778 Score = 84.2 bits (92), Expect = 3e-14 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||||||||| |||||||||| ||||||| | |||| | Sbjct 473944 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 473885 Query 201 CGAACGCCTTAGTATTCTCTA 221 || | ||| |||||||||| Sbjct 473884 CGCGCCCCTAGGTATTCTCTA 473864 >seq122046 Length=166258 Score = 78.8 bits (86), Expect = 1e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||| ||||||||||| ||||||| || |||||| | |||| | Sbjct 23613 GGCACCCCTTCTCCTAAAGTTACGGGGTTATTTTGCTGAGATCCTTAGAGAGAGTTGTCT 23672 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248 | | ||| ||||||||||||| |||| |||||| |||| |||| Sbjct 23673 TGCGCCCCTAGGTATTCTCTACCTATCCACTTGTGTCAGTTTCGGGTA 23720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693396674677