Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq148160 93.3 4e-17 seq100388 93.3 4e-17 seq99156 86.0 7e-15 seq145850 75.2 1e-11 >seq148160 Length=982571 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 812338 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCAAAAA--G 812395 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 812396 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 812445 >seq100388 Length=97256 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 88770 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCAAAAA--G 88713 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 88712 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 88663 >seq99156 Length=695364 Score = 86.0 bits (94), Expect = 7e-15 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||| ||| || |||| ||| | || ||| || Sbjct 339038 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCAGGAGAAGGGGTGCCTCCTCAAAAAGGG 339097 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGG 186 | | ||||| || ||| || ||| |||||||| |||||||||||| Sbjct 339098 G-GTCCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGG 339143 >seq145850 Length=626778 Score = 75.2 bits (82), Expect = 1e-11 Identities = 76/98 (78%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 473898 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCAAAAA--G 473955 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAA 177 | || ||||| || ||| || ||| |||||||| ||| Sbjct 473956 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAA 473993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530432479246