Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 87.8 2e-15
seq100388 87.8 2e-15
seq120380 82.4 7e-14
seq99156 75.2 1e-11
>seq148160
Length=982571
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 812398 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 812457
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 812458 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 812503
>seq100388
Length=97256
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 88710 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 88651
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 88650 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 88605
>seq120380
Length=46297
Score = 82.4 bits (90), Expect = 7e-14
Identities = 76/95 (80%), Gaps = 1/95 (1%)
Strand=Plus/Minus
Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114
|||||||| | ||||||||||||||||||||||| ||||||| || | || ||
Sbjct 127 ATACCAGGG-GTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 69
Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149
||||| || |||| |||||||||||| |||||||
Sbjct 68 GTATAAAGTCTGACACCTGCCCGGTGCTGGAAGGT 34
>seq99156
Length=695364
Score = 75.2 bits (82), Expect = 1e-11
Identities = 74/96 (77%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116
|||||||| ||||||||||| |||||||||| |||||||| | ||| | ||
Sbjct 339109 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTATCTGCAAAGTTGTAAGACCATGT 339168
Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
|| ||| || ||||||||| |||||||||||| ||
Sbjct 339169 ATGGGGGCTGGCGCCTGCCCAGTGCCGGAAGGTCAA 339204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476111080769
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |