Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq148160 178 3e-42 seq99156 159 7e-37 seq109749 147 4e-33 seq109409 145 1e-32 seq103349 111 3e-22 seq147336 96.9 7e-18 seq141009 93.3 8e-17 seq72068 93.3 8e-17 >seq148160 Length=982571 Score = 178 bits (196), Expect = 3e-42 Identities = 179/230 (78%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 812878 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 812937 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 || ||||| | |||| | ||| ||| | || | | |||| || |||| ||||| Sbjct 812938 GCGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGTAAGGGCATAAGGGA 812996 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| ||| Sbjct 812997 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 813056 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 813057 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 813106 >seq99156 Length=695364 Score = 159 bits (176), Expect = 7e-37 Identities = 175/230 (76%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| ||||||| |||||||||| ||||||||||| Sbjct 339576 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 339635 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 || ||||| | |||| | | ||| ||| | || | | |||| || |||| ||||| Sbjct 339636 GCGCAAAGGTTTCCTCGGGTCGGACGGAGATTG-GCCCTCGAGTGTAAGGGCATAAGGGA 339694 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||||||| | |||| | ||| |||||| ||||||||||| || ||||||| || Sbjct 339695 GCTTGACTGCAAGACCCACTCGTCGAGCAGGAACGAAAGTCGGCTATAGTGATCCGACGA 339754 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| || ||||| ||||||||||| | ||||||||| ||| || |||||| Sbjct 339755 TGCCGAGTGGAAGGGCCGTCGCTCAAGGGATAAAAGTTACTCTAGGGATA 339804 >seq109749 Length=103046 Score = 147 bits (162), Expect = 4e-33 Identities = 162/212 (76%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 129 CAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAG 188 |||||| ||||||| || ||||||| ||||||||||||| ||||| | |||| Sbjct 51320 CAGTTTCTATGGGGCGTAGGCATCCCAAAAGGTAACGGAGGCGCGCAAAGGTTTCCTCGA 51261 Query 189 CTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCT 247 | ||| ||| | || | | |||| || |||| ||||| | |||||||| | |||| Sbjct 51260 GTCGGACGGAGATTG-GCCCTCGAGTGTAAGGGCATAAGGGAGCTTGACTGCAAGACCCA 51202 Query 248 CAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCG 307 | ||| |||||||| ||||||||| |||| ||||||| |||||| || ||||| ||||| Sbjct 51201 CCCGTCGAGCAGGGATGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCG 51142 Query 308 TCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| || | |||||| ||| || |||||| Sbjct 51141 TCGCTCAACCG-TAAAAGTTACTCTAGGGATA 51111 >seq109409 Length=1395 Score = 145 bits (160), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| ||||| | |||||| ||||||| || ||||||| ||||||||||| Sbjct 1247 GGGACAGTCTCAGTTAGACAGTTTCTATGGGGCGTAGGCTTCCCAAAAGGTAACGGAGGC 1188 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 || ||||| | |||||| | | || | || | | |||| || |||| ||||| Sbjct 1187 GCGCAAAGGTTTCCTCAGGCCGAACGGGGATTG-GCCCTCGAGTGTAAGGGCATAAGGGA 1129 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGA-CGAAAGTCGGGCTTAATGATCCGGCG 288 | |||||||| | |||| | || || ||||| ||||||| || |||| | ||||| || Sbjct 1128 GCTTGACTGCAAGACCCACCCGTTGAGTAGGGAACGAAAGTTGGCCTTAGTTATCCGACG 1069 Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||| || ||||| || |||||||| ||||||||||| ||| || |||||| Sbjct 1068 GTGCCGAGTGGAAGGGTCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 1018 >seq103349 Length=447616 Score = 111 bits (122), Expect = 3e-22 Identities = 102/129 (79%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270 |||| || | |||||||| | |||||||| | |||| | || ||||| ||| |||||| Sbjct 395924 AGTGTAAGGTCAAAAGGGAGCTTGACTGCAAGACCCACCCATCGAGCAGAGACAAAAGTC 395983 Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330 | |||| ||||| | ||||||||| ||||| ||| ||| ||| ||||||||||| ||| Sbjct 395984 AGCCTTAGTGATCTGACGGTGCTGAGTGGAAGGGCAGTCACTCAACGGATAAAAGTTACT 396043 Query 331 CTGGGGATA 339 || |||||| Sbjct 396044 CTAGGGATA 396052 >seq147336 Length=215632 Score = 96.9 bits (106), Expect = 7e-18 Identities = 161/230 (70%), Gaps = 12/230 (5%) Strand=Plus/Plus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | || ||| |||||| |||||||||| |||||| |||| Sbjct 126253 GGGACAGTCTCAGGTAGACATTTTTTATGGGGCATAGGCCTCCCAAAAGGTAACGAAGGC 126312 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229 || ||| | | ||| | ||| || | || | | ||||||| |||| | ||| Sbjct 126313 GCGCAAGGGTTTCCTTGGGCCGGACAGAGATTG-GCCCTCGAGTGCAAGGGCATACGGGA 126371 Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289 | |||| ||| | ||| | | |||||||||||||||||| || | ||||||| || Sbjct 126372 GCTTGATTGCAAGACC-----GCCCAGCAGGGACGAAAGTCGGCCTCAGTGATCCGACG- 126425 Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 || ||||| || |||||||| |||||| |||| || || |||||| Sbjct 126426 ----GAGTGGAAGGGTCGTCGCTCAACGGATCAAAGTGACTCTAGGGATA 126471 >seq141009 Length=26560 Score = 93.3 bits (102), Expect = 8e-17 Identities = 106/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 129 CAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAG 188 |||||| ||||||| |||||||||| ||||||||||||||||||| | |||| | Sbjct 22758 CAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGCCCAAAGGTTTCCTCGG 22699 Query 189 CTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCT 247 | ||| ||| | || | | |||| || |||| ||||| | |||||||| | |||| Sbjct 22698 GTCGGACGGAGA-TTGGCCCTCGAGTGTAAGGGCATAAGGGAGCTTGACTGCAAGACCCA 22640 Query 248 CAAGTCTAGCAGGGACGAAA 267 | ||| ||||||||||||| Sbjct 22639 CCCGTCGAGCAGGGACGAAA 22620 >seq72068 Length=51308 Score = 93.3 bits (102), Expect = 8e-17 Identities = 160/231 (69%), Gaps = 16/231 (7%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||| |||| | |||||| |||||| |||||||||| |||| | |||| Sbjct 41806 GGGACAGTCTCAGGTTGACAGTTTCTATGGGGCATAGGCCTCCCAAACGGTAATGAAGGC 41747 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAAC---CATGCGCACAGTGCAAAGGCAAAAGG 227 || ||| | | || | ||| ||| | | | || ||||||| |||| | | Sbjct 41746 GCGCAAGGGTTTTCTTGGGCCGGACGGAGATTGGCCTTCG---AGTGCAAGGGCATACAG 41690 Query 228 GTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGC 287 | | |||| ||| | ||| | || |||||||||||||||| |||| ||||||| | Sbjct 41689 GAGCTTGATTGCAAGACCACCCAG-----CAGGGACGAAAGTCGGCCTTAGTGATCCGAC 41635 Query 288 GGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGAT 338 || || |||| ||||||||||| |||||| |||| || || ||||| Sbjct 41634 GGAGC-----GGAAAGGCCGTCGCTCAACGGATCAAAGTGACTCTAGGGAT 41589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980934760224