Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 178 3e-42
seq99156 159 7e-37
seq109749 147 4e-33
seq109409 145 1e-32
seq103349 111 3e-22
seq147336 96.9 7e-18
seq141009 93.3 8e-17
seq72068 93.3 8e-17
>seq148160
Length=982571
Score = 178 bits (196), Expect = 3e-42
Identities = 179/230 (78%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 812878 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 812937
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
|| ||||| | |||| | ||| ||| | || | | |||| || |||| |||||
Sbjct 812938 GCGCAAAGGTTTCCTCGGGCCGGACGGAGATTG-GCCCTCGAGTGTAAGGGCATAAGGGA 812996
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||||||||||||||| |||| ||||||| |||
Sbjct 812997 GCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGG 813056
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| ||||||||||| ||| || ||||||
Sbjct 813057 TGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 813106
>seq99156
Length=695364
Score = 159 bits (176), Expect = 7e-37
Identities = 175/230 (76%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| ||||||| |||||||||| |||||||||||
Sbjct 339576 GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGC 339635
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
|| ||||| | |||| | | ||| ||| | || | | |||| || |||| |||||
Sbjct 339636 GCGCAAAGGTTTCCTCGGGTCGGACGGAGATTG-GCCCTCGAGTGTAAGGGCATAAGGGA 339694
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||||||| | |||| | ||| |||||| ||||||||||| || ||||||| ||
Sbjct 339695 GCTTGACTGCAAGACCCACTCGTCGAGCAGGAACGAAAGTCGGCTATAGTGATCCGACGA 339754
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||| || ||||| ||||||||||| | ||||||||| ||| || ||||||
Sbjct 339755 TGCCGAGTGGAAGGGCCGTCGCTCAAGGGATAAAAGTTACTCTAGGGATA 339804
>seq109749
Length=103046
Score = 147 bits (162), Expect = 4e-33
Identities = 162/212 (76%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 129 CAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAG 188
|||||| ||||||| || ||||||| ||||||||||||| ||||| | ||||
Sbjct 51320 CAGTTTCTATGGGGCGTAGGCATCCCAAAAGGTAACGGAGGCGCGCAAAGGTTTCCTCGA 51261
Query 189 CTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCT 247
| ||| ||| | || | | |||| || |||| ||||| | |||||||| | ||||
Sbjct 51260 GTCGGACGGAGATTG-GCCCTCGAGTGTAAGGGCATAAGGGAGCTTGACTGCAAGACCCA 51202
Query 248 CAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCG 307
| ||| |||||||| ||||||||| |||| ||||||| |||||| || ||||| |||||
Sbjct 51201 CCCGTCGAGCAGGGATGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCG 51142
Query 308 TCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||||| || | |||||| ||| || ||||||
Sbjct 51141 TCGCTCAACCG-TAAAAGTTACTCTAGGGATA 51111
>seq109409
Length=1395
Score = 145 bits (160), Expect = 1e-32
Identities = 173/231 (75%), Gaps = 3/231 (1%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| ||||| | |||||| ||||||| || ||||||| |||||||||||
Sbjct 1247 GGGACAGTCTCAGTTAGACAGTTTCTATGGGGCGTAGGCTTCCCAAAAGGTAACGGAGGC 1188
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
|| ||||| | |||||| | | || | || | | |||| || |||| |||||
Sbjct 1187 GCGCAAAGGTTTCCTCAGGCCGAACGGGGATTG-GCCCTCGAGTGTAAGGGCATAAGGGA 1129
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGA-CGAAAGTCGGGCTTAATGATCCGGCG 288
| |||||||| | |||| | || || ||||| ||||||| || |||| | ||||| ||
Sbjct 1128 GCTTGACTGCAAGACCCACCCGTTGAGTAGGGAACGAAAGTTGGCCTTAGTTATCCGACG 1069
Query 289 GTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||| || ||||| || |||||||| ||||||||||| ||| || ||||||
Sbjct 1068 GTGCCGAGTGGAAGGGTCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 1018
>seq103349
Length=447616
Score = 111 bits (122), Expect = 3e-22
Identities = 102/129 (79%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 211 AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTC 270
|||| || | |||||||| | |||||||| | |||| | || ||||| ||| ||||||
Sbjct 395924 AGTGTAAGGTCAAAAGGGAGCTTGACTGCAAGACCCACCCATCGAGCAGAGACAAAAGTC 395983
Query 271 GGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACC 330
| |||| ||||| | ||||||||| ||||| ||| ||| ||| ||||||||||| |||
Sbjct 395984 AGCCTTAGTGATCTGACGGTGCTGAGTGGAAGGGCAGTCACTCAACGGATAAAAGTTACT 396043
Query 331 CTGGGGATA 339
|| ||||||
Sbjct 396044 CTAGGGATA 396052
>seq147336
Length=215632
Score = 96.9 bits (106), Expect = 7e-18
Identities = 161/230 (70%), Gaps = 12/230 (5%)
Strand=Plus/Plus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | || ||| |||||| |||||||||| |||||| ||||
Sbjct 126253 GGGACAGTCTCAGGTAGACATTTTTTATGGGGCATAGGCCTCCCAAAAGGTAACGAAGGC 126312
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGT 229
|| ||| | | ||| | ||| || | || | | ||||||| |||| | |||
Sbjct 126313 GCGCAAGGGTTTCCTTGGGCCGGACAGAGATTG-GCCCTCGAGTGCAAGGGCATACGGGA 126371
Query 230 GTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGG 289
| |||| ||| | ||| | | |||||||||||||||||| || | ||||||| ||
Sbjct 126372 GCTTGATTGCAAGACC-----GCCCAGCAGGGACGAAAGTCGGCCTCAGTGATCCGACG- 126425
Query 290 TGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|| ||||| || |||||||| |||||| |||| || || ||||||
Sbjct 126426 ----GAGTGGAAGGGTCGTCGCTCAACGGATCAAAGTGACTCTAGGGATA 126471
>seq141009
Length=26560
Score = 93.3 bits (102), Expect = 8e-17
Identities = 106/140 (76%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 129 CAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAG 188
|||||| ||||||| |||||||||| ||||||||||||||||||| | |||| |
Sbjct 22758 CAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGCCCAAAGGTTTCCTCGG 22699
Query 189 CTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCT 247
| ||| ||| | || | | |||| || |||| ||||| | |||||||| | ||||
Sbjct 22698 GTCGGACGGAGA-TTGGCCCTCGAGTGTAAGGGCATAAGGGAGCTTGACTGCAAGACCCA 22640
Query 248 CAAGTCTAGCAGGGACGAAA 267
| ||| |||||||||||||
Sbjct 22639 CCCGTCGAGCAGGGACGAAA 22620
>seq72068
Length=51308
Score = 93.3 bits (102), Expect = 8e-17
Identities = 160/231 (69%), Gaps = 16/231 (7%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||| |||| | |||||| |||||| |||||||||| |||| | ||||
Sbjct 41806 GGGACAGTCTCAGGTTGACAGTTTCTATGGGGCATAGGCCTCCCAAACGGTAATGAAGGC 41747
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAAC---CATGCGCACAGTGCAAAGGCAAAAGG 227
|| ||| | | || | ||| ||| | | | || ||||||| |||| | |
Sbjct 41746 GCGCAAGGGTTTTCTTGGGCCGGACGGAGATTGGCCTTCG---AGTGCAAGGGCATACAG 41690
Query 228 GTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGC 287
| | |||| ||| | ||| | || |||||||||||||||| |||| ||||||| |
Sbjct 41689 GAGCTTGATTGCAAGACCACCCAG-----CAGGGACGAAAGTCGGCCTTAGTGATCCGAC 41635
Query 288 GGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGAT 338
|| || |||| ||||||||||| |||||| |||| || || |||||
Sbjct 41634 GGAGC-----GGAAAGGCCGTCGCTCAACGGATCAAAGTGACTCTAGGGAT 41589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 980934760224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |