Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 107 2e-21
seq129160 107 2e-21
seq100388 107 2e-21
seq99156 98.7 1e-18
seq98533 98.7 1e-18
seq122046 95.1 1e-17
seq131530 89.7 6e-16
seq102399 75.2 1e-11
>seq148160
Length=982571
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 812718 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 812659
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 812658 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 812600
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 812599 ACAAGGAATTTCGCTACCTTAGGACCGTTA 812570
>seq129160
Length=487704
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 12234 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 12293
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 12294 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 12352
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 12353 ACAAGGAATTTCGCTACCTTAGGACCGTTA 12382
>seq100388
Length=97256
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 88390 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 88449
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 88450 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 88508
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 88509 ACAAGGAATTTCGCTACCTTAGGACCGTTA 88538
>seq99156
Length=695364
Score = 98.7 bits (108), Expect = 1e-18
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | | |||||||||
Sbjct 339419 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTACTTCACTGAG 339360
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||| || |||||||||
Sbjct 339359 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTGGGGACTTACCCG 339301
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 339300 ACAAGGAATTTCGCTACCTTAGGACCGTTA 339271
>seq98533
Length=86531
Score = 98.7 bits (108), Expect = 1e-18
Identities = 100/132 (76%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101
|| |||| | |||||||||| || | | ||||||| |||| | | | |||||||
Sbjct 23441 GCAGGTAGTTTGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGT 23383
Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161
||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 23382 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 23323
Query 162 TTAGGACCGTTA 173
||||||||||||
Sbjct 23322 TTAGGACCGTTA 23311
>seq122046
Length=166258
Score = 95.1 bits (104), Expect = 1e-17
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 23279 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 23338
Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144
| | |||||||| ||| || ||||| | || |||||||||||||
Sbjct 23339 CCTATCTCTGAGACAGTGCCTAGATCGTTACGCCTTTCGTACGAGTTGGAACTTACCCGA 23398
Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||| ||||||||
Sbjct 23399 CAAGGAATTTCGCTACCTTAAGACCGTTA 23427
>seq131530
Length=10543
Score = 89.7 bits (98), Expect = 6e-16
Identities = 98/132 (74%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101
|| |||| || |||||||||| || | | |||||||||||| | | | |||| ||
Sbjct 5464 GCAGGTAGTCTGCATCTTCACAGACATGTCTATTTCACTGAGC-CTCTCTCCGAGAAAGT 5406
Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161
||| || ||||||| |||| ||||||||||||||||||||||| |||||
Sbjct 5405 GCCCAGATCATTACGCCTTTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTCACTACC 5346
Query 162 TTAGGACCGTTA 173
||||||| ||||
Sbjct 5345 TTAGGACTGTTA 5334
>seq102399
Length=5968
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || ||||| ||||| ||||||||||||||||||||| ||| |||||||||||||
Sbjct 5919 TACGCCTTTCGTATGGGTCGAAACTTACCCGACAAGGAATTTTGCTTCCTTAGGACCGTT 5860
Query 173 A 173
|
Sbjct 5859 A 5859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546409361151
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |