Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq148160 107 2e-21 seq129160 107 2e-21 seq100388 107 2e-21 seq99156 98.7 1e-18 seq98533 98.7 1e-18 seq122046 95.1 1e-17 seq131530 89.7 6e-16 seq102399 75.2 1e-11 >seq148160 Length=982571 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 812718 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 812659 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 812658 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 812600 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 812599 ACAAGGAATTTCGCTACCTTAGGACCGTTA 812570 >seq129160 Length=487704 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 12234 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 12293 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 12294 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 12352 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 12353 ACAAGGAATTTCGCTACCTTAGGACCGTTA 12382 >seq100388 Length=97256 Score = 107 bits (118), Expect = 2e-21 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 88390 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 88449 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| |||||||||||||||| Sbjct 88450 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 88508 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 88509 ACAAGGAATTTCGCTACCTTAGGACCGTTA 88538 >seq99156 Length=695364 Score = 98.7 bits (108), Expect = 1e-18 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | | ||||||||| Sbjct 339419 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTACTTCACTGAG 339360 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| ||| || ||||||| ||| || ||||||||| Sbjct 339359 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTGGGGACTTACCCG 339301 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 339300 ACAAGGAATTTCGCTACCTTAGGACCGTTA 339271 >seq98533 Length=86531 Score = 98.7 bits (108), Expect = 1e-18 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 || |||| | |||||||||| || | | ||||||| |||| | | | ||||||| Sbjct 23441 GCAGGTAGTTTGCATCTTCACAGACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGT 23383 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 23382 GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 23323 Query 162 TTAGGACCGTTA 173 |||||||||||| Sbjct 23322 TTAGGACCGTTA 23311 >seq122046 Length=166258 Score = 95.1 bits (104), Expect = 1e-17 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 23279 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 23338 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | | |||||||| ||| || ||||| | || ||||||||||||| Sbjct 23339 CCTATCTCTGAGACAGTGCCTAGATCGTTACGCCTTTCGTACGAGTTGGAACTTACCCGA 23398 Query 145 CAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||| |||||||| Sbjct 23399 CAAGGAATTTCGCTACCTTAAGACCGTTA 23427 >seq131530 Length=10543 Score = 89.7 bits (98), Expect = 6e-16 Identities = 98/132 (74%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 || |||| || |||||||||| || | | |||||||||||| | | | |||| || Sbjct 5464 GCAGGTAGTCTGCATCTTCACAGACATGTCTATTTCACTGAGC-CTCTCTCCGAGAAAGT 5406 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || ||||||| |||| ||||||||||||||||||||||| ||||| Sbjct 5405 GCCCAGATCATTACGCCTTTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTCACTACC 5346 Query 162 TTAGGACCGTTA 173 ||||||| |||| Sbjct 5345 TTAGGACTGTTA 5334 >seq102399 Length=5968 Score = 75.2 bits (82), Expect = 1e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||| ||||| ||||||||||||||||||||| ||| ||||||||||||| Sbjct 5919 TACGCCTTTCGTATGGGTCGAAACTTACCCGACAAGGAATTTTGCTTCCTTAGGACCGTT 5860 Query 173 A 173 | Sbjct 5859 A 5859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546409361151