Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 181 2e-43
seq145771 158 2e-36
seq74089 158 2e-36
seq142263 156 8e-36
seq104896 86.0 1e-14
>seq148160
Length=982571
Score = 181 bits (200), Expect = 2e-43
Identities = 145/175 (83%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| ||||||| |||| |||||| || || |||||||||||||||||||||
Sbjct 776759 GGCATTGCTCCATCAGGCTTTCTCCCATTACAGAAAATTCCCCACTGCTGCCTCCCGTAG 776700
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| | |||| | || ||||| |||
Sbjct 776699 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 776640
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
| ||| |||||| |||||| ||||||||||| |||||| | ||||||||| ||
Sbjct 776639 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 776585
Score = 161 bits (178), Expect = 2e-37
Identities = 221/305 (72%), Gaps = 19/305 (6%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||| ||| | || || |||||||||||||||||||||
Sbjct 822403 GGCATTGCTCCGTCAGGCTTTCGCCC-TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 822461
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||| ||||||||||||||||| |||||| | ||| | |||| | || |||| |||
Sbjct 822462 GAGTCTGAGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAACTACTGAT 822521
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| || |||||| |||||| ||||||||||| |||||| | || |||||| || |
Sbjct 822522 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGTGAGCCCCTCCTCGG 822581
Query 181 G-CGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239
| ||| || || ||| |||| | | || |||||||||
Sbjct 822582 GTGGATTCCTCCTT------------TTGC--ACCTCAGCC--TACAGGGTATTAGCAAC 822625
Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299
||||| | ||| |||| ||| || |||||||| || | | ||||||||||||||||
Sbjct 822626 TGTTTCAAGTTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTCCG 822684
Query 300 CCACT 304
|||||
Sbjct 822685 CCACT 822689
>seq145771
Length=440912
Score = 158 bits (174), Expect = 2e-36
Identities = 140/175 (80%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| ||| ||||||| | || || ||||||||| ||||||||||
Sbjct 15527 GGCATTGCTCCGTCAGGCTTTTGCCCATTGCGAAAAATTTCCCACTGCTACCTCCCGTAG 15586
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||| ||||||||||||||| |||||| | ||| | |||| | || |||| |||
Sbjct 15587 GAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTAGTGAT 15646
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
| ||| |||| | | |||| |||||||||||| |||||| | ||||||||| ||
Sbjct 15647 CATCGCCTTGATAAGTTATTGTCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 15701
>seq74089
Length=31305
Score = 158 bits (174), Expect = 2e-36
Identities = 140/175 (80%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| || || | |||||||||||||||||||
Sbjct 2330 GGCATTGCTTCGTCAGGCTTTCGCCCATTGCAGAAAATTCTCCACTGCTGCCTCCCGTAG 2389
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||| | ||||||||||||| |||||| | ||| | |||| | | ||||| |||
Sbjct 2390 GAGTCTGGGTCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACTAGCTACTGAT 2449
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175
| ||| |||||| |||||| ||||||||||| |||||| | |||||| || ||
Sbjct 2450 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGTCCCTC 2504
>seq142263
Length=125487
Score = 156 bits (172), Expect = 8e-36
Identities = 130/158 (82%), Gaps = 1/158 (1%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | ||| | ||||| |||| ||||||| | || || |||||||||||||||||||||
Sbjct 66513 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 66454
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||| | ||| | |||| | || ||||| |||
Sbjct 66453 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 66394
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAA 158
| ||| |||||| ||||| | ||||||||| ||||
Sbjct 66393 CATCGCCTTGGTAAACTATT-GCCCACCAACTAGCTAA 66357
>seq104896
Length=129203
Score = 86.0 bits (94), Expect = 1e-14
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67
||| |||| | |||| |||||| | ||| || || || | ||| | ||| ||||||||
Sbjct 99717 CTGGATCAAGCTTTCGCCCATTATCCAAGATTCCTCATTATTGCTCCACGTTGGAGTCTG 99658
Query 68 GGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGC 127
|||| ||||||||||||| |||||| | ||| || || || |||| ||| | |||
Sbjct 99657 GGCCATGTCTCAGTCCCAGTGTGGCTGATCATCCAAAAAGACCAGCTAAGCATCATTGGC 99598
Query 128 TTGGTGGGCTATTATCTCACCAACTACCTAAT 159
|||| | || || ||| ||||||||||
Sbjct 99597 TTGGACAACCTCTACCTGACCTACTACCTAAT 99566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 996910896384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |