Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq148160 181 2e-43 seq145771 158 2e-36 seq74089 158 2e-36 seq142263 156 8e-36 seq104896 86.0 1e-14 >seq148160 Length=982571 Score = 181 bits (200), Expect = 2e-43 Identities = 145/175 (83%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| ||||||| |||| |||||| || || ||||||||||||||||||||| Sbjct 776759 GGCATTGCTCCATCAGGCTTTCTCCCATTACAGAAAATTCCCCACTGCTGCCTCCCGTAG 776700 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| | |||| | || ||||| ||| Sbjct 776699 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 776640 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||||| |||||| ||||||||||| |||||| | ||||||||| || Sbjct 776639 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 776585 Score = 161 bits (178), Expect = 2e-37 Identities = 221/305 (72%), Gaps = 19/305 (6%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||| ||| | || || ||||||||||||||||||||| Sbjct 822403 GGCATTGCTCCGTCAGGCTTTCGCCC-TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 822461 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||| ||||||||||||||||| |||||| | ||| | |||| | || |||| ||| Sbjct 822462 GAGTCTGAGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAACTACTGAT 822521 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | || |||||| |||||| ||||||||||| |||||| | || |||||| || | Sbjct 822522 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGTGAGCCCCTCCTCGG 822581 Query 181 G-CGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTT 239 | ||| || || ||| |||| | | || ||||||||| Sbjct 822582 GTGGATTCCTCCTT------------TTGC--ACCTCAGCC--TACAGGGTATTAGCAAC 822625 Query 240 CGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCG 299 ||||| | ||| |||| ||| || |||||||| || | | |||||||||||||||| Sbjct 822626 TGTTTCAAGTTGTTGTTCCCCTCCCAAGGGCAGGTT-CTTATGCGTTACTCACCCGTCCG 822684 Query 300 CCACT 304 ||||| Sbjct 822685 CCACT 822689 >seq145771 Length=440912 Score = 158 bits (174), Expect = 2e-36 Identities = 140/175 (80%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| ||| ||||||| | || || ||||||||| |||||||||| Sbjct 15527 GGCATTGCTCCGTCAGGCTTTTGCCCATTGCGAAAAATTTCCCACTGCTACCTCCCGTAG 15586 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||| ||||||||||||||| |||||| | ||| | |||| | || |||| ||| Sbjct 15587 GAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTAGTGAT 15646 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||| | | |||| |||||||||||| |||||| | ||||||||| || Sbjct 15647 CATCGCCTTGATAAGTTATTGTCTCACCAACTAGCTAATCAGACGCGAGCCCCTC 15701 >seq74089 Length=31305 Score = 158 bits (174), Expect = 2e-36 Identities = 140/175 (80%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| || || | ||||||||||||||||||| Sbjct 2330 GGCATTGCTTCGTCAGGCTTTCGCCCATTGCAGAAAATTCTCCACTGCTGCCTCCCGTAG 2389 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||| | ||||||||||||| |||||| | ||| | |||| | | ||||| ||| Sbjct 2390 GAGTCTGGGTCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACTAGCTACTGAT 2449 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 | ||| |||||| |||||| ||||||||||| |||||| | |||||| || || Sbjct 2450 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGTCCCTC 2504 >seq142263 Length=125487 Score = 156 bits (172), Expect = 8e-36 Identities = 130/158 (82%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | ||||| |||| ||||||| | || || ||||||||||||||||||||| Sbjct 66513 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 66454 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| | |||| | || ||||| ||| Sbjct 66453 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 66394 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAA 158 | ||| |||||| ||||| | ||||||||| |||| Sbjct 66393 CATCGCCTTGGTAAACTATT-GCCCACCAACTAGCTAA 66357 >seq104896 Length=129203 Score = 86.0 bits (94), Expect = 1e-14 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67 ||| |||| | |||| |||||| | ||| || || || | ||| | ||| |||||||| Sbjct 99717 CTGGATCAAGCTTTCGCCCATTATCCAAGATTCCTCATTATTGCTCCACGTTGGAGTCTG 99658 Query 68 GGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGC 127 |||| ||||||||||||| |||||| | ||| || || || |||| ||| | ||| Sbjct 99657 GGCCATGTCTCAGTCCCAGTGTGGCTGATCATCCAAAAAGACCAGCTAAGCATCATTGGC 99598 Query 128 TTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||| | || || ||| |||||||||| Sbjct 99597 TTGGACAACCTCTACCTGACCTACTACCTAAT 99566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996910896384