Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq49234 123 2e-26 seq17646 109 5e-22 seq138301 105 6e-21 seq103696 98.7 8e-19 seq74089 95.1 1e-17 seq147906 80.6 2e-13 seq127656 78.8 8e-13 >seq49234 Length=584312 Score = 123 bits (136), Expect = 2e-26 Identities = 124/160 (78%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | || || ||| ||||||| ||||||||| Sbjct 318104 CGAGTTGCAGCCTGCAATCCGAACTGAGG-ACGGGTTTTGGAGTTAGCTCACCCTCGCGG 318162 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | ||| |||| ||| |||||||| ||||||| |||| |||||||| ||| Sbjct 318163 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 318222 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||||||| || |||| Sbjct 318223 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 318262 >seq17646 Length=3430 Score = 109 bits (120), Expect = 5e-22 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 37 TTCTGGGATTAGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGT 96 || ||| ||||||| |||||||||| | ||| |||| ||| |||||||| |||| Sbjct 260 TTTTGGAGTTAGCTCACCCTCGCGGGATCGCGACCCTTTGTCCCGGCCATTGTAGCACGT 319 Query 97 GTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 ||| |||| |||||||| ||||| ||||||||||||||| ||||||||||||| || Sbjct 320 GTGTCGCCCAGGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTT 379 Query 157 GTCAC 161 |||| Sbjct 380 ATCAC 384 >seq138301 Length=548446 Score = 105 bits (116), Expect = 6e-21 Identities = 120/160 (75%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 ||||||||||| |||||||| ||| | | ||||| || ||| |||| ||| | | Sbjct 312099 CGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCTGCCTTACAG 312157 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || ||| | |||||||| ||||||| ||| ||||||||||||||| Sbjct 312158 CCTTGTTTTCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCTAACCCATAAGGGCCAT 312217 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 | |||||||||||||||||||||||||||| || | |||| Sbjct 312218 GCGGACTTGACGTCATCCCCACCTTCCTCCAGTCTCTCAC 312257 Score = 98.7 bits (108), Expect = 8e-19 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| |||||||||||||||| ||||| ||||||||||||| Sbjct 316029 CCATTGTAGCACGTGTGTGGCCCAACCCATAAGGGCCATGCGGACTAGACGTCATCCCCA 316088 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||| || | |||| Sbjct 316089 CCTTCCTCCAGTCTCTCAC 316107 >seq103696 Length=22940 Score = 98.7 bits (108), Expect = 8e-19 Identities = 69/79 (87%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| ||||||| |||| |||||||||||||||| ||||| ||||||||||||| Sbjct 20927 CCATTGTAGCACGTGTGTGGCCCAACCCATAAGGGCCATGCGGACTAGACGTCATCCCCA 20986 Query 143 CCTTCCTCCGGTTTGTCAC 161 ||||||||| || | |||| Sbjct 20987 CCTTCCTCCAGTCTCTCAC 21005 >seq74089 Length=31305 Score = 95.1 bits (104), Expect = 1e-17 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 47 AGCTCCCCCTCGCGGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCT 106 ||||| |||||||||| | ||| |||| | | |||||||| ||||||| |||| Sbjct 1177 AGCTCACCCTCGCGGGATCGCGACCCTTTATCCCAGCCATTGTAGCACGTGTGTCGCCCA 1236 Query 107 ACCCATAAGGGCCATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTT 156 |||||||| ||||| ||||||||||||||| ||||||||||||| || Sbjct 1237 GGGCATAAGGGGCATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTT 1286 >seq147906 Length=463935 Score = 80.6 bits (88), Expect = 2e-13 Identities = 111/154 (72%), Gaps = 1/154 (1%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||| | ||||| | || || || ||||||| ||||||| | Sbjct 338799 CGAGTTGCAGCCTGAAATTCAGACTAAGG-ACGGGTTTTGAAGTTAGCTCACCCTCGCAG 338741 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | |||||| | ||| ||||||| || |||| |||| |||||||||||| Sbjct 338740 GATCGCGGCCGTTTGTCCCGCTCATTGTAGCACATGTGTCGCCCAGGGCATAAGGGCCAT 338681 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTT 155 || | || | ||||||| ||||||||| ||||| Sbjct 338680 GATGGTTTAATGTCATCCTCACCTTCCTTCGGTT 338647 >seq127656 Length=346162 Score = 78.8 bits (86), Expect = 8e-13 Identities = 114/160 (71%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||| ||| || |||||| ||| | || || ||| ||||||| ||||| | | Sbjct 173556 CGAGTTTCAGCCTGCAATCCAAACTGAGG-ACGGATTTTGGAGTTAGCTCACCCTCACAG 173614 Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121 | | || |||| ||| |||||||| ||||||| || |||||| ||| Sbjct 173615 GATCACGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCTCCTAGAGCATAAGCAGCAT 173674 Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 || ||||||||||||||| ||||||||| ||| || |||| Sbjct 173675 GATGACTTGACGTCATCCTCACCTTCCTTCGGCTTATCAC 173714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415398929530