Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq74089 129 1e-27
seq148160 113 7e-23
seq104896 96.9 6e-18
seq142263 95.1 2e-17
>seq74089
Length=31305
Score = 129 bits (142), Expect = 1e-27
Identities = 201/286 (70%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACT-GGTGTTCCT 64
||||||| ||||| |||||| | | |||||| || |||||| | ||||| | |
Sbjct 1983 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTTGGTGTCCGT 2042
Query 65 CCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAA 124
| || |||| ||||||||||||| ||| | |||||| |||| || | | |||| |
Sbjct 2043 TCCGATCTCTAAGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCA 2102
Query 125 GAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
| |||||| | || | ||||||||||| | ||| ||| | ||||||
Sbjct 2103 GCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACAGCGGACTTGAA 2162
Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244
|| |||||| | | |||| |||||| | |||||||||| ||||| | | || ||
Sbjct 2163 AAGCCACCTACAGACGCCTTACGCCCAATCATTCCGGATAACACTTGCATCTTTTGTCTT 2222
Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| |||| |||||||||| ||||| ||| ||||||||||||| ||
Sbjct 2223 ATCGCGACTGCTGGCACAGAGTTAACCGATGCTTATTCCTCAGATA 2268
>seq148160
Length=982571
Score = 113 bits (124), Expect = 7e-23
Identities = 196/284 (69%), Gaps = 1/284 (0%)
Strand=Plus/Plus
Query 8 TTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCG 67
||||| ||||| |||||| | | |||||| || |||| | |||||||| | |
Sbjct 822058 TTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGGCGTTGGTGTTCTTTCC 822117
Query 68 TATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAA 127
|| || ||||||||||| ||| ||| | |||||| |||| || | | |||| |
Sbjct 822118 GATCTCCACGCATTTCACTGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAACT 822177
Query 128 AAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTC 187
||||| | || | | |||||||| | ||| || | | ||||
Sbjct 822178 TGGTAGTTTACACCGCCTGTCCAGTGTTGAGCCTTGGGATTTGACGGCGGGCTTGAAAAG 822237
Query 188 CCGCCTACACGCCCTTTACACCC-AATAAATCCGGATAACGCTTGCCACCTACGTATTAC 246
|| |||||| | |||||||||| ||| | || |||||||||||| ||| || ||||
Sbjct 822238 CCACCTACAGACGCTTTACACCCCAATCATTCTAGATAACGCTTGCATCCTCTGTCTTAC 822297
Query 247 CGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||| || ||||||||| ||||||||||||| ||
Sbjct 822298 CGCGGCTGCTGGTACAGAGTTAGCCGATGCTTATTCCTCAGATA 822341
Score = 109 bits (120), Expect = 9e-22
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 151 GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCC 210
||||||||| | | ||| || | |||||| || |||||| | |||||| |||
Sbjct 776960 GGGTTGAGCTCTGGGATTTGACGACGGACTTGAAAAGCCACCTACAGACGCTTTACGCCC 776901
Query 211 AATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGC 270
||| | |||||||||||||||| ||| || ||||||||||||||||||| |||||||
Sbjct 776900 AATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCACAGAGTTAGC 776841
Query 271 CGTGGCTTATTCCTCAGGTA 290
|| |||||||||| || ||
Sbjct 776840 CGATGCTTATTCCTTAGATA 776821
>seq104896
Length=129203
Score = 96.9 bits (106), Expect = 6e-18
Identities = 198/292 (68%), Gaps = 12/292 (4%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| |||||||| || ||||||| || |||| | | ||||||| ||| ||
Sbjct 100079 CCCATGCTTTCGCACCACAGCGTCGGTAGGGACCCAGAGAGCTACCTTCGCTTTTGGCGT 100020
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| |||| ||||| ||||| || ||||||||| |||||| | ||||| |||
Sbjct 100019 TCCTTCGTAGATCTATTGATTTCGCCCCTACACACGAAATTCCACTCTCCTCTATCTCAC 99960
Query 121 TCAAGAAAAACAGTTTCAAATGCAG---GCTATGGGTTGAGCCCATAGTTTTCACATCTG 177
||||| || |||| | ||| |||| ||| | | || | | | |
Sbjct 99959 TCAAGTGAATTGGTTTTGAGAGCATTCTGCTAGTTTTTGGTGACTTGAACTTGAAACCCG 99900
Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237
| || || ||||||| |||||||||||||| | | || | ||||| |||||| ||
Sbjct 99899 A-TTCACT----GCCTACATGCCCTTTACACCCAGTCATTCTGAATAACACTTGCCCTCT 99845
Query 238 ----ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
|| |||| |||||| |||||||| |||||| || ||||| ||||||
Sbjct 99844 CTGCCTGTCTTACTGCGGCTACTGGCACGAAGTTAGTCGGGGCTTCTTCCTC 99793
>seq142263
Length=125487
Score = 95.1 bits (104), Expect = 2e-17
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 151 GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCC 210
||||||||||| | | ||| || | |||||| || |||||| | ||| || |||
Sbjct 66714 GGGTTGAGCCCTTGGATTTGACGGCGGACTTGAAAAGCCACCTACAGACGCTTCACGCCC 66655
Query 211 AATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGC 270
| | | |||||||||||||||| || || ||||||||||||||||||| ||| |||
Sbjct 66654 AGTCATTCCGGATAACGCTTGCATCCGTTGTCTTACCGCGGCTGCTGGCACAGAGTCAGC 66595
Query 271 CGTGGCTTATTCCTCAGGTA 290
|| |||||||| | || ||
Sbjct 66594 CGATGCTTATTCTTTAGATA 66575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 827602482679
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |