Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq74089 129 1e-27 seq148160 113 7e-23 seq104896 96.9 6e-18 seq142263 95.1 2e-17 >seq74089 Length=31305 Score = 129 bits (142), Expect = 1e-27 Identities = 201/286 (70%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACT-GGTGTTCCT 64 ||||||| ||||| |||||| | | |||||| || |||||| | ||||| | | Sbjct 1983 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTTGGTGTCCGT 2042 Query 65 CCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAA 124 | || |||| ||||||||||||| ||| | |||||| |||| || | | |||| | Sbjct 2043 TCCGATCTCTAAGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCA 2102 Query 125 GAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 | |||||| | || | ||||||||||| | ||| ||| | |||||| Sbjct 2103 GCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCCCTGGGATTTGACAGCGGACTTGAA 2162 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || |||||| | | |||| |||||| | |||||||||| ||||| | | || || Sbjct 2163 AAGCCACCTACAGACGCCTTACGCCCAATCATTCCGGATAACACTTGCATCTTTTGTCTT 2222 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | |||| |||||||||| ||||| ||| ||||||||||||| || Sbjct 2223 ATCGCGACTGCTGGCACAGAGTTAACCGATGCTTATTCCTCAGATA 2268 >seq148160 Length=982571 Score = 113 bits (124), Expect = 7e-23 Identities = 196/284 (69%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 8 TTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCG 67 ||||| ||||| |||||| | | |||||| || |||| | |||||||| | | Sbjct 822058 TTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGGCGTTGGTGTTCTTTCC 822117 Query 68 TATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAA 127 || || ||||||||||| ||| ||| | |||||| |||| || | | |||| | Sbjct 822118 GATCTCCACGCATTTCACTGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCCAACT 822177 Query 128 AAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTC 187 ||||| | || | | |||||||| | ||| || | | |||| Sbjct 822178 TGGTAGTTTACACCGCCTGTCCAGTGTTGAGCCTTGGGATTTGACGGCGGGCTTGAAAAG 822237 Query 188 CCGCCTACACGCCCTTTACACCC-AATAAATCCGGATAACGCTTGCCACCTACGTATTAC 246 || |||||| | |||||||||| ||| | || |||||||||||| ||| || |||| Sbjct 822238 CCACCTACAGACGCTTTACACCCCAATCATTCTAGATAACGCTTGCATCCTCTGTCTTAC 822297 Query 247 CGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||| || ||||||||| ||||||||||||| || Sbjct 822298 CGCGGCTGCTGGTACAGAGTTAGCCGATGCTTATTCCTCAGATA 822341 Score = 109 bits (120), Expect = 9e-22 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 151 GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCC 210 ||||||||| | | ||| || | |||||| || |||||| | |||||| ||| Sbjct 776960 GGGTTGAGCTCTGGGATTTGACGACGGACTTGAAAAGCCACCTACAGACGCTTTACGCCC 776901 Query 211 AATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGC 270 ||| | |||||||||||||||| ||| || ||||||||||||||||||| ||||||| Sbjct 776900 AATCATTCCGGATAACGCTTGCATCCTCTGTCTTACCGCGGCTGCTGGCACAGAGTTAGC 776841 Query 271 CGTGGCTTATTCCTCAGGTA 290 || |||||||||| || || Sbjct 776840 CGATGCTTATTCCTTAGATA 776821 >seq104896 Length=129203 Score = 96.9 bits (106), Expect = 6e-18 Identities = 198/292 (68%), Gaps = 12/292 (4%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| || ||||||| || |||| | | ||||||| ||| || Sbjct 100079 CCCATGCTTTCGCACCACAGCGTCGGTAGGGACCCAGAGAGCTACCTTCGCTTTTGGCGT 100020 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| ||||| ||||| || ||||||||| |||||| | ||||| ||| Sbjct 100019 TCCTTCGTAGATCTATTGATTTCGCCCCTACACACGAAATTCCACTCTCCTCTATCTCAC 99960 Query 121 TCAAGAAAAACAGTTTCAAATGCAG---GCTATGGGTTGAGCCCATAGTTTTCACATCTG 177 ||||| || |||| | ||| |||| ||| | | || | | | | Sbjct 99959 TCAAGTGAATTGGTTTTGAGAGCATTCTGCTAGTTTTTGGTGACTTGAACTTGAAACCCG 99900 Query 178 ACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237 | || || ||||||| |||||||||||||| | | || | ||||| |||||| || Sbjct 99899 A-TTCACT----GCCTACATGCCCTTTACACCCAGTCATTCTGAATAACACTTGCCCTCT 99845 Query 238 ----ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 || |||| |||||| |||||||| |||||| || ||||| |||||| Sbjct 99844 CTGCCTGTCTTACTGCGGCTACTGGCACGAAGTTAGTCGGGGCTTCTTCCTC 99793 >seq142263 Length=125487 Score = 95.1 bits (104), Expect = 2e-17 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 151 GGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACCC 210 ||||||||||| | | ||| || | |||||| || |||||| | ||| || ||| Sbjct 66714 GGGTTGAGCCCTTGGATTTGACGGCGGACTTGAAAAGCCACCTACAGACGCTTCACGCCC 66655 Query 211 AATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTGCTGGCACGTAGTTAGC 270 | | | |||||||||||||||| || || ||||||||||||||||||| ||| ||| Sbjct 66654 AGTCATTCCGGATAACGCTTGCATCCGTTGTCTTACCGCGGCTGCTGGCACAGAGTCAGC 66595 Query 271 CGTGGCTTATTCCTCAGGTA 290 || |||||||| | || || Sbjct 66594 CGATGCTTATTCTTTAGATA 66575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827602482679