Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq71656 116 4e-24 seq148351 113 5e-23 seq20165 113 5e-23 seq121058 104 2e-20 seq146917 98.7 1e-18 seq129472 98.7 1e-18 seq148846 96.9 4e-18 seq134638 95.1 1e-17 >seq71656 Length=256660 Score = 116 bits (128), Expect = 4e-24 Identities = 135/178 (76%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||| Sbjct 246075 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 246016 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| ||||| ||| || | ||| || |||||||| | Sbjct 246015 ATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 245958 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| |||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 245957 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 245900 >seq148351 Length=359326 Score = 113 bits (124), Expect = 5e-23 Identities = 134/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||| Sbjct 249501 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGAG 249442 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| ||||| ||| || | ||| || |||||||| | Sbjct 249441 ATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 249384 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| |||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 249383 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 249326 >seq20165 Length=171424 Score = 113 bits (124), Expect = 5e-23 Identities = 134/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||| Sbjct 39846 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 39905 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | |||| | | |||||||||| ||| || | ||| |||||||| | Sbjct 39906 ATAACACCATAGAATTT-CGGTTCTATTGTGTTGGCCTTCGGGATTAGA-GTAATGATTA 39963 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| |||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 39964 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCATAGGTGAAATTCTTGGATTTAT 40021 >seq121058 Length=157067 Score = 104 bits (114), Expect = 2e-20 Identities = 132/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | | ||| || ||| |||| | |||||||| |||| Sbjct 108631 TTACTTTGAAGAAATTAGAGTGCTTAAACCAAGCCCACGCTCTGGATACATTAGCATGAG 108572 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| |||| ||| || | ||| || |||||||| | Sbjct 108571 ATAACACCACAGGATTT-CGGTCTTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 108514 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| |||||||| | ||||| ||| |||| ||||||||||||||||||||| Sbjct 108513 AGAGGGACGGTCGGGGGCATTCGTATTTAATAGTCAGAGGTGAAATTCTTGGATTTAT 108456 >seq146917 Length=22511 Score = 98.7 bits (108), Expect = 1e-18 Identities = 131/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||| | ||| ||||| | |||||||| |||| Sbjct 3450 TTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCCATGCTCTGGATACATTAGCATGCG 3509 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | || ||||| ||| || | ||| | |||||||| | Sbjct 3510 ATAACATCACAGGATTT-CAGTCCTATTGTGTTGGCCTTCGGGATCAGA-GTAATGATTA 3567 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| |||||||| | ||||| || || | ||||||||||||||||||||| Sbjct 3568 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTAT 3625 >seq129472 Length=68642 Score = 98.7 bits (108), Expect = 1e-18 Identities = 132/180 (73%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATT 64 ||| || |||||||||| ||||| ||| | |||||||| ||| |||| | ||||||| Sbjct 14145 CAGCACCGTTACTTTGAAGAAATTTGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATT 14204 Query 65 ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT 124 | |||| |||| | | |||| | |||| ||||| ||| || | ||| || || Sbjct 14205 AGCATGTGATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GT 14262 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| || | ||| |||||||| | ||||| || |||| ||||||||||||||| Sbjct 14263 AATGATTAAGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGG 14322 >seq148846 Length=236892 Score = 96.9 bits (106), Expect = 4e-18 Identities = 131/178 (74%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||| Sbjct 181210 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTAGATACATTAGCATGGG 181151 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | | || ||||| ||| ||||| ||| | |||||||| | Sbjct 181150 ATAACACCACAGGATTT-CAGTCCTATTGTGTTGGTTTTCGGGATCAGA-GTAATGATTA 181093 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| | |||| | ||||| || |||| |||||||||||||||||||| Sbjct 181092 AGAGGGACGG---GGGGCATTCGTATTTCATAGTCAGTGGTGAAATTCTTGGATTTAT 181038 >seq134638 Length=352617 Score = 95.1 bits (104), Expect = 1e-17 Identities = 137/187 (73%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATT 64 ||| || |||||||||| ||||||||| | |||||| | ||| ||| | ||||||| Sbjct 240201 CAGCACCGTTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCCACACTCTAGATACATT 240142 Query 65 ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCG 123 | |||| |||| | | |||| | |||| ||||| ||| || ||| || | | | Sbjct 240141 AGCATGTGATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGAGATCGGA--G 240085 Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183 ||||||| || | |||| ||||||| ||| |||| || |||| |||||||||||||| Sbjct 240084 TAATGATTAAGAGGGATGGTCGGGGCATTCA-TATTTCATAGTCATAGGTGAAATTCTTG 240026 Query 184 GATTTAT 190 ||||| Sbjct 240025 AGTTTAT 240019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511260220960