Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq71656 116 4e-24
seq148351 113 5e-23
seq20165 113 5e-23
seq121058 104 2e-20
seq146917 98.7 1e-18
seq129472 98.7 1e-18
seq148846 96.9 4e-18
seq134638 95.1 1e-17
>seq71656
Length=256660
Score = 116 bits (128), Expect = 4e-24
Identities = 135/178 (76%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||
Sbjct 246075 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 246016
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 246015 ATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 245958
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| |||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 245957 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 245900
>seq148351
Length=359326
Score = 113 bits (124), Expect = 5e-23
Identities = 134/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||
Sbjct 249501 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGAG 249442
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 249441 ATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 249384
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| |||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 249383 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 249326
>seq20165
Length=171424
Score = 113 bits (124), Expect = 5e-23
Identities = 134/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||
Sbjct 39846 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 39905
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||| | | |||||||||| ||| || | ||| |||||||| |
Sbjct 39906 ATAACACCATAGAATTT-CGGTTCTATTGTGTTGGCCTTCGGGATTAGA-GTAATGATTA 39963
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| |||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 39964 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCATAGGTGAAATTCTTGGATTTAT 40021
>seq121058
Length=157067
Score = 104 bits (114), Expect = 2e-20
Identities = 132/178 (74%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | | ||| || ||| |||| | |||||||| ||||
Sbjct 108631 TTACTTTGAAGAAATTAGAGTGCTTAAACCAAGCCCACGCTCTGGATACATTAGCATGAG 108572
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| |||| ||| || | ||| || |||||||| |
Sbjct 108571 ATAACACCACAGGATTT-CGGTCTTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 108514
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| |||||||| | ||||| ||| |||| |||||||||||||||||||||
Sbjct 108513 AGAGGGACGGTCGGGGGCATTCGTATTTAATAGTCAGAGGTGAAATTCTTGGATTTAT 108456
>seq146917
Length=22511
Score = 98.7 bits (108), Expect = 1e-18
Identities = 131/178 (74%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||| | ||| ||||| | |||||||| ||||
Sbjct 3450 TTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCCATGCTCTGGATACATTAGCATGCG 3509
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | || ||||| ||| || | ||| | |||||||| |
Sbjct 3510 ATAACATCACAGGATTT-CAGTCCTATTGTGTTGGCCTTCGGGATCAGA-GTAATGATTA 3567
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| |||||||| | ||||| || || | |||||||||||||||||||||
Sbjct 3568 AGAGGGACGGTCGGGGGCATTCGTATTTCATAGTTAGAGGTGAAATTCTTGGATTTAT 3625
>seq129472
Length=68642
Score = 98.7 bits (108), Expect = 1e-18
Identities = 132/180 (73%), Gaps = 3/180 (2%)
Strand=Plus/Plus
Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATT 64
||| || |||||||||| ||||| ||| | |||||||| ||| |||| | |||||||
Sbjct 14145 CAGCACCGTTACTTTGAAGAAATTTGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATT 14204
Query 65 ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT 124
| |||| |||| | | |||| | |||| ||||| ||| || | ||| || ||
Sbjct 14205 AGCATGTGATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GT 14262
Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184
|||||| || | ||| |||||||| | ||||| || |||| |||||||||||||||
Sbjct 14263 AATGATTAAGAGGGACGGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGG 14322
>seq148846
Length=236892
Score = 96.9 bits (106), Expect = 4e-18
Identities = 131/178 (74%), Gaps = 6/178 (3%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||
Sbjct 181210 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTAGATACATTAGCATGGG 181151
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | | || ||||| ||| ||||| ||| | |||||||| |
Sbjct 181150 ATAACACCACAGGATTT-CAGTCCTATTGTGTTGGTTTTCGGGATCAGA-GTAATGATTA 181093
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| | |||| | ||||| || |||| ||||||||||||||||||||
Sbjct 181092 AGAGGGACGG---GGGGCATTCGTATTTCATAGTCAGTGGTGAAATTCTTGGATTTAT 181038
>seq134638
Length=352617
Score = 95.1 bits (104), Expect = 1e-17
Identities = 137/187 (73%), Gaps = 6/187 (3%)
Strand=Plus/Minus
Query 6 CAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGA-ATACATT 64
||| || |||||||||| ||||||||| | |||||| | ||| ||| | |||||||
Sbjct 240201 CAGCACCGTTACTTTGAAGAAATTAGAGTGCTCAAAGTAAGCCCACACTCTAGATACATT 240142
Query 65 ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGT-TTCTAGGACCGCCCG 123
| |||| |||| | | |||| | |||| ||||| ||| || ||| || | | |
Sbjct 240141 AGCATGTGATAACACCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGAGATCGGA--G 240085
Query 124 TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTG 183
||||||| || | |||| ||||||| ||| |||| || |||| ||||||||||||||
Sbjct 240084 TAATGATTAAGAGGGATGGTCGGGGCATTCA-TATTTCATAGTCATAGGTGAAATTCTTG 240026
Query 184 GATTTAT 190
|||||
Sbjct 240025 AGTTTAT 240019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511260220960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |