Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq147056 80.6 4e-13 seq125692 80.6 4e-13 >seq147056 Length=319965 Score = 80.6 bits (88), Expect = 4e-13 Identities = 99/134 (74%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| || |||| | || || || || |||||| ||||||||||| || || || Sbjct 29890 CATGGAATGCCTCTT-GAGGTATATCAACAGAGCCCACCCGCTTCATGCGCTTCTTTCCT 29948 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 |||| || || || | ||||| | ||| | | | || ||||| || |||||||| ||| Sbjct 29949 TCCTTCTGTTTTTCTAAAAGCTTCCTCTTTCTGGTAACATCACCACCATAGCATTTTGCC 30008 Query 217 AGTACGTTCTTTCT 230 | ||||||||||| Sbjct 30009 AAAACGTTCTTTCT 30022 >seq125692 Length=343850 Score = 80.6 bits (88), Expect = 4e-13 Identities = 99/134 (74%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 97 CAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCG 156 || |||| || |||| | || || || || |||||| ||||||||||| || || || Sbjct 318692 CATGGAATGCCTCTT-GAGGTATATCAACAGAGCCCACCCGCTTCATGCGCTTCTTTCCT 318634 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 |||| || || || | ||||| | ||| | | | || ||||| || |||||||| ||| Sbjct 318633 TCCTTCTGTTTTTCTAAAAGCTTCCTCTTTCTGGTAACATCACCACCATAGCATTTTGCC 318574 Query 217 AGTACGTTCTTTCT 230 | ||||||||||| Sbjct 318573 AAAACGTTCTTTCT 318560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840383988203