Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 239 1e-60
seq142263 203 8e-50
seq145771 187 6e-45
seq74089 187 6e-45
seq104896 109 1e-21
seq135154 73.4 1e-10
>seq148160
Length=982571
Score = 239 bits (264), Expect = 1e-60
Identities = 300/410 (73%), Gaps = 30/410 (7%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| || ||||| |||||||| | | || ||||||| ||| |||||||||| | ||||||
Sbjct 776790 TTCACGACCCGTGGGCCTTCTACCTCCATGCGGCATTGCTCCATCAGGCTTTCTCCCATT 776731
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
|| |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 776730 ACAGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 776671
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| ||||| |||| ||||||||| |||| |||||| ||| || ||| || | |||
Sbjct 776670 GGCTGATCATCTTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 776611
Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244
||||||||||| | | | | ||| || | || ||| ||| ||||
Sbjct 776610 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTG- 776563
Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304
||| | || | |||||||| || |||||||| ||| | ||||||| ||||
Sbjct 776562 -CTTCTCAGCCTACGGAGTATTAGCAACTATTTCCAGTTGTTGTTCCCCTCCCAAGGGCA 776504
Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364
| ||| | | |||||||||||||| ||||| ||| || || ||||
Sbjct 776503 GGTTCTTATTCGTTACTCACCCGTCCACCACT------GGAAACACCA-----CTTC--- 776458
Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|||| |||||||||||||||| || ||||||||||||||| ||||||
Sbjct 776457 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATTCTGAG 776411
Score = 235 bits (260), Expect = 1e-59
Identities = 300/410 (73%), Gaps = 31/410 (8%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| || ||||| |||||||| | | |||||||||| ||| | |||||||| ||||| ||
Sbjct 822372 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCC-TT 822430
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || ||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 822431 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGAGCCGTGTCTCAGTCCCAGTGT 822490
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| ||||| |||| ||||| ||| |||| || ||| ||| || ||| || | |||
Sbjct 822491 GGCTGATCATCTTCTCGGACCAACTACTGATCATCACCTTGGTAAGCTATTGCCTCACCA 822550
Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244
||||||||||| | || | | ||| ||| || ||| ||| ||||
Sbjct 822551 ACTAGCTAATCAGACGTGAGCCCCTCCTCGGGTG-GA---------TTCCTCCT-TTTGC 822599
Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304
| | | | || ||||||||| || ||||| ||| ||| | ||||||| ||||
Sbjct 822600 ACCTCAGCC--TACAGGGTATTAGCAACTGTTTCAAGTTGTTGTTCCCCTCCCAAGGGCA 822657
Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364
| ||| | | |||||||||||||||||||| ||| || || ||||
Sbjct 822658 GGTTCTTATGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 822703
Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|||| |||||||||||||||| || ||||||||||||||| |||||
Sbjct 822704 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 822750
>seq142263
Length=125487
Score = 203 bits (224), Expect = 8e-50
Identities = 159/189 (84%), Gaps = 1/189 (1%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| || ||||| |||||||| | | |||||||||| ||| | |||||||| ||||||||
Sbjct 66544 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 66485
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || |||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 66484 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 66425
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| ||||| |||| ||||||||| |||| |||||| ||| | ||| ||| |||
Sbjct 66424 GGCTGATCATCTTCTCGGACCAGCTACTGATCATCGCCTTGGTAAACTATT-GCCCACCA 66366
Query 185 ACTAGCTAA 193
|||||||||
Sbjct 66365 ACTAGCTAA 66357
>seq145771
Length=440912
Score = 187 bits (206), Expect = 6e-45
Identities = 156/191 (82%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| ||||| || |||||||| | | |||||||||| ||| | |||||||| |||||||
Sbjct 15496 TTCACAACTCGTGGGCCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTTTTGCCCATT 15555
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || ||| ||||||||| |||||||||||||||||| ||||||||||| |||||||
Sbjct 15556 GCGAAAAATTTCCCACTGCTACCTCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCCAGTGT 15615
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| ||||| |||| |||||||||| |||| |||||| | | | ||| | | |||
Sbjct 15616 GGCTGATCATCTTCTCGGACCAGCTAGTGATCATCGCCTTGATAAGTTATTGTCTCACCA 15675
Query 185 ACTAGCTAATC 195
|||||||||||
Sbjct 15676 ACTAGCTAATC 15686
>seq74089
Length=31305
Score = 187 bits (206), Expect = 6e-45
Identities = 156/191 (82%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
|| |||||| | |||||||| | | ||| |||||| ||| | |||||||| ||||||||
Sbjct 2299 TTCACAACCAGTGGGCCTTCTACCTCCACACGGCATTGCTTCGTCAGGCTTTCGCCCATT 2358
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| || |||| ||||||||||||||||||||||||||| | ||||||||| |||||||
Sbjct 2359 GCAGAAAATTCTCCACTGCTGCCTCCCGTAGGAGTCTGGGTCATGTCTCAGTCCCAGTGT 2418
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||||| ||||| |||| ||| ||||| |||| |||||| ||| || ||| || | |||
Sbjct 2419 GGCTGATCATCTTCTCGGACTAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 2478
Query 185 ACTAGCTAATC 195
|||||||||||
Sbjct 2479 ACTAGCTAATC 2489
>seq104896
Length=129203
Score = 109 bits (120), Expect = 1e-21
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22 TTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACT 81
||||||| |||||| || ||| |||| |||| |||||||| | ||| ||||| || |
Sbjct 99738 TTCTTCACTCACGCGATATTACTGGATCAAGCTTTCGCCCATTATCCAAGATTCCTCATT 99679
Query 82 GCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCA 141
||| | ||| ||||||||| || ||||||||| |||||||||||| |||||| |
Sbjct 99678 ATTGCTCCACGTTGGAGTCTGGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCCAAAAA 99619
Query 142 GACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194
||||||||| | ||| | | || || || |||| || |||| |||||
Sbjct 99618 GACCAGCTAAGCATCATTGGCTTGGACAACCTCTACCTGACCTACTACCTAAT 99566
>seq135154
Length=447870
Score = 73.4 bits (80), Expect = 1e-10
Identities = 52/60 (87%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT 167
||||||||| |||||||||||| ||||| |||| ||||||||| |||| |||||| |||
Sbjct 1 TGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTATTGATCATCGCCTTGGT 60
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1220576802624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |