Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq148160 239 1e-60 seq142263 203 8e-50 seq145771 187 6e-45 seq74089 187 6e-45 seq104896 109 1e-21 seq135154 73.4 1e-10 >seq148160 Length=982571 Score = 239 bits (264), Expect = 1e-60 Identities = 300/410 (73%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | || ||||||| ||| |||||||||| | |||||| Sbjct 776790 TTCACGACCCGTGGGCCTTCTACCTCCATGCGGCATTGCTCCATCAGGCTTTCTCCCATT 776731 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 776730 ACAGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 776671 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||| |||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 776670 GGCTGATCATCTTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 776611 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 776610 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTG- 776563 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 ||| | || | |||||||| || |||||||| ||| | ||||||| |||| Sbjct 776562 -CTTCTCAGCCTACGGAGTATTAGCAACTATTTCCAGTTGTTGTTCCCCTCCCAAGGGCA 776504 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||| ||||| ||| || || |||| Sbjct 776503 GGTTCTTATTCGTTACTCACCCGTCCACCACT------GGAAACACCA-----CTTC--- 776458 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| |||||| Sbjct 776457 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATTCTGAG 776411 Score = 235 bits (260), Expect = 1e-59 Identities = 300/410 (73%), Gaps = 31/410 (8%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | |||||||||| ||| | |||||||| ||||| || Sbjct 822372 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCC-TT 822430 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 822431 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGAGCCGTGTCTCAGTCCCAGTGT 822490 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||| |||| ||||| ||| |||| || ||| ||| || ||| || | ||| Sbjct 822491 GGCTGATCATCTTCTCGGACCAACTACTGATCATCACCTTGGTAAGCTATTGCCTCACCA 822550 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | || | | ||| ||| || ||| ||| |||| Sbjct 822551 ACTAGCTAATCAGACGTGAGCCCCTCCTCGGGTG-GA---------TTCCTCCT-TTTGC 822599 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 | | | | || ||||||||| || ||||| ||| ||| | ||||||| |||| Sbjct 822600 ACCTCAGCC--TACAGGGTATTAGCAACTGTTTCAAGTTGTTGTTCCCCTCCCAAGGGCA 822657 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 822658 GGTTCTTATGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 822703 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 822704 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 822750 >seq142263 Length=125487 Score = 203 bits (224), Expect = 8e-50 Identities = 159/189 (84%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 66544 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 66485 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 66484 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 66425 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||| |||| ||||||||| |||| |||||| ||| | ||| ||| ||| Sbjct 66424 GGCTGATCATCTTCTCGGACCAGCTACTGATCATCGCCTTGGTAAACTATT-GCCCACCA 66366 Query 185 ACTAGCTAA 193 ||||||||| Sbjct 66365 ACTAGCTAA 66357 >seq145771 Length=440912 Score = 187 bits (206), Expect = 6e-45 Identities = 156/191 (82%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || ||||| || |||||||| | | |||||||||| ||| | |||||||| ||||||| Sbjct 15496 TTCACAACTCGTGGGCCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTTTTGCCCATT 15555 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || ||| ||||||||| |||||||||||||||||| ||||||||||| ||||||| Sbjct 15556 GCGAAAAATTTCCCACTGCTACCTCCCGTAGGAGTCTGGGTCGTGTCTCAGTCCCAGTGT 15615 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||| |||| |||||||||| |||| |||||| | | | ||| | | ||| Sbjct 15616 GGCTGATCATCTTCTCGGACCAGCTAGTGATCATCGCCTTGATAAGTTATTGTCTCACCA 15675 Query 185 ACTAGCTAATC 195 ||||||||||| Sbjct 15676 ACTAGCTAATC 15686 >seq74089 Length=31305 Score = 187 bits (206), Expect = 6e-45 Identities = 156/191 (82%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || |||||| | |||||||| | | ||| |||||| ||| | |||||||| |||||||| Sbjct 2299 TTCACAACCAGTGGGCCTTCTACCTCCACACGGCATTGCTTCGTCAGGCTTTCGCCCATT 2358 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | || |||| ||||||||||||||||||||||||||| | ||||||||| ||||||| Sbjct 2359 GCAGAAAATTCTCCACTGCTGCCTCCCGTAGGAGTCTGGGTCATGTCTCAGTCCCAGTGT 2418 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| ||||| |||| ||| ||||| |||| |||||| ||| || ||| || | ||| Sbjct 2419 GGCTGATCATCTTCTCGGACTAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 2478 Query 185 ACTAGCTAATC 195 ||||||||||| Sbjct 2479 ACTAGCTAATC 2489 >seq104896 Length=129203 Score = 109 bits (120), Expect = 1e-21 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 22 TTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACT 81 ||||||| |||||| || ||| |||| |||| |||||||| | ||| ||||| || | Sbjct 99738 TTCTTCACTCACGCGATATTACTGGATCAAGCTTTCGCCCATTATCCAAGATTCCTCATT 99679 Query 82 GCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCA 141 ||| | ||| ||||||||| || ||||||||| |||||||||||| |||||| | Sbjct 99678 ATTGCTCCACGTTGGAGTCTGGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCCAAAAA 99619 Query 142 GACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194 ||||||||| | ||| | | || || || |||| || |||| ||||| Sbjct 99618 GACCAGCTAAGCATCATTGGCTTGGACAACCTCTACCTGACCTACTACCTAAT 99566 >seq135154 Length=447870 Score = 73.4 bits (80), Expect = 1e-10 Identities = 52/60 (87%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT 167 ||||||||| |||||||||||| ||||| |||| ||||||||| |||| |||||| ||| Sbjct 1 TGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTATTGATCATCGCCTTGGT 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1220576802624