Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq148160 302 1e-79
seq142263 273 7e-71
seq74089 260 4e-67
seq145771 221 4e-55
>seq148160
Length=982571
Score = 302 bits (334), Expect = 1e-79
Identities = 274/343 (80%), Gaps = 3/343 (1%)
Strand=Plus/Plus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||||||||||||||||||||| ||| || |||||||||||||| |||||||||| |
Sbjct 776593 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 776652
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||| | ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 776653 CCGAGAAGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 776712
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||| || |||||| ||||||||||| ||||| ||||| || | ||
Sbjct 776713 CAGTGGGGAATTTTCTGTAATGGGAGAAAGCCTGATGGAGCAATGCCGCATGGAGGTAGA 776772
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397
||||| |||||||| || ||| | ||| ||||| ||||| |||| | ||||
Sbjct 776773 AGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGATGGTATCTAAGGAAT 776832
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 776833 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 776892
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||| | | |||||||||| || |||||||| || | |||||
Sbjct 776893 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC 776934
Score = 286 bits (316), Expect = 1e-74
Identities = 268/339 (79%), Gaps = 3/339 (1%)
Strand=Plus/Minus
Query 162 CGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCT 221
|||||||||||||||||||| ||| || ||||||||||| || ||||||||| | |
Sbjct 822566 CGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGTGATGATCAGTAGTTGGTCC 822507
Query 222 GAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCA 281
|||| | ||||| |||||| ||| |||||||||||| || |||||||||||||||||||
Sbjct 822506 GAGAAGATGATCAGCCACACTGGGACTGAGACACGGCTCAGACTCCTACGGGAGGCAGCA 822447
Query 282 GTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAG 341
||||||||| || | ||| |||| ||||||||| | ||||| |||||||| | ||||
Sbjct 822446 GTGGGGAATTTTCCGCAA-GGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAG 822388
Query 342 GCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGAA 399
||| |||||||| || ||| | ||| ||||| |||||||||| |||||| ||
Sbjct 822387 GCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAATAA 822328
Query 400 GCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 459
|| ||||||||| || |||||||||||||||| || ||| || ||||||||| ||
Sbjct 822327 GCATCGGCTAACTCTGTACCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCTAGA 822268
Query 460 ATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498
|| | ||||| |||||| || |||||||| || | |||
Sbjct 822267 ATGATTGGGGTGTAAAGCGTCTGTAGGTGGCTTTTCAAG 822229
>seq142263
Length=125487
Score = 273 bits (302), Expect = 7e-71
Identities = 263/334 (79%), Gaps = 4/334 (1%)
Strand=Plus/Plus
Query 169 TTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGG 228
||||||||||||| || || | |||||||||||| |||||||||| | | |||| |
Sbjct 66357 TTAGCTAGTTGGTG-GGCAATAGTTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAAGA 66415
Query 229 TGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGA 288
||||| |||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 66416 TGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGA 66475
Query 289 ATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCG 348
|| || | |||||||| ||||||||| | ||||| |||||||| | ||||||| ||
Sbjct 66476 ATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCCACG 66535
Query 349 GGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGAAGCCCCGG 406
|||||| || ||| | ||| ||||| |||||| ||| | | || |||| |||
Sbjct 66536 GGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACAGTATCTAAAGAATAAGCATCGG 66595
Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466
|| ||| ||||||||||||||||||| || || || ||||||||||||||| |||
Sbjct 66596 CTGACTCTGTGCCAGCAGCCGCGGTAAGACAACGGATGCAAGCGTTATCCGGAATGACT- 66654
Query 467 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||||| ||| || |||||||| || | |||||
Sbjct 66655 GGGCGTGAAGCGTCTGTAGGTGGCTTTTCAAGTC 66688
>seq74089
Length=31305
Score = 260 bits (288), Expect = 4e-67
Identities = 271/353 (77%), Gaps = 3/353 (1%)
Strand=Plus/Minus
Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209
|||| ||| |||||||||||||||||||||| ||| || |||||||||||||| ||||
Sbjct 2506 AGGAGGGACTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATC 2447
Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269
|||||| | |||| | ||||| |||||| ||| ||||||||| | ||| |||||||
Sbjct 2446 AGTAGCTAGTCCGAGAAGATGATCAGCCACACTGGGACTGAGACATGACCCAGACTCCTA 2387
Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329
|||||||||||||||| |||| || |||||||| ||||||||| | ||||| |||| |
Sbjct 2386 CGGGAGGCAGCAGTGGAGAATTTTCTGCAATGGGCGAAAGCCTGACGAAGCAATGCCGTG 2327
Query 330 TGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTA 387
|| | ||||||| | ||| || || ||| | ||| ||||| || |||||||
Sbjct 2326 TGGAGGTAGAAGGCCCACTGGTTGTGAACTTCTTTTCTCGGAGAAGAAGCAAGGACGGTA 2267
Query 388 CTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTA 447
|||||| |||| ||| ||||| |||||||||| |||| ||| || | | || |
Sbjct 2266 TCTGAGGAATAAGCATCGGTTAACTCTGTGCCAGCAGTCGCGATAAGACAAAAGATGCAA 2207
Query 448 GCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
| |||||||||||| | | |||||||| | || |||||||| || | |||||
Sbjct 2206 GTGTTATCCGGAATGA-TTGGGCGTAAGGCGTCTGTAGGTGGCTTTTCAAGTC 2155
>seq145771
Length=440912
Score = 221 bits (244), Expect = 4e-55
Identities = 215/276 (78%), Gaps = 2/276 (1%)
Strand=Plus/Minus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||||||||||||||||||||| || || |||| |||||||| ||||| |||| |
Sbjct 15693 CGCGTCTGATTAGCTAGTTGGTGAGACAATAACTTATCAAGGCGATGATCACTAGCTGGT 15634
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||| | ||||| |||||| ||| ||||||||||| ||| |||||||||||||| ||
Sbjct 15633 CCGAGAAGATGATCAGCCACACTGGGACTGAGACACGACCCAGACTCCTACGGGAGGTAG 15574
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||| ||| || | |||||||||||||||||| | ||||| ||||||||| | ||
Sbjct 15573 CAGTGGGAAATTTTTCGCAATGGGCAAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGA 15514
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397
||||| || || || || ||| | ||| ||||| |||| ||||| ||||||
Sbjct 15513 AGGCCCACGAGTTGTGAACTTCTTTTCTCGGAGAAGAAGCAATGGCGGTATCTGAGGAAT 15454
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAA 433
|| | ||||||||| | ||||||| || ||||||
Sbjct 15453 AAACATCGGCTAACTCTGAGCCAGCAACCACGGTAA 15418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1495366344576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |