Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq148160 302 1e-79 seq142263 273 7e-71 seq74089 260 4e-67 seq145771 221 4e-55 >seq148160 Length=982571 Score = 302 bits (334), Expect = 1e-79 Identities = 274/343 (80%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 776593 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 776652 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||| | ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 776653 CCGAGAAGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 776712 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || |||||| ||||||||||| ||||| ||||| || | || Sbjct 776713 CAGTGGGGAATTTTCTGTAATGGGAGAAAGCCTGATGGAGCAATGCCGCATGGAGGTAGA 776772 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 ||||| |||||||| || ||| | ||| ||||| ||||| |||| | |||| Sbjct 776773 AGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGATGGTATCTAAGGAAT 776832 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 776833 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 776892 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || | ||||| Sbjct 776893 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC 776934 Score = 286 bits (316), Expect = 1e-74 Identities = 268/339 (79%), Gaps = 3/339 (1%) Strand=Plus/Minus Query 162 CGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCT 221 |||||||||||||||||||| ||| || ||||||||||| || ||||||||| | | Sbjct 822566 CGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGTGATGATCAGTAGTTGGTCC 822507 Query 222 GAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCA 281 |||| | ||||| |||||| ||| |||||||||||| || ||||||||||||||||||| Sbjct 822506 GAGAAGATGATCAGCCACACTGGGACTGAGACACGGCTCAGACTCCTACGGGAGGCAGCA 822447 Query 282 GTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAG 341 ||||||||| || | ||| |||| ||||||||| | ||||| |||||||| | |||| Sbjct 822446 GTGGGGAATTTTCCGCAA-GGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAG 822388 Query 342 GCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGAA 399 ||| |||||||| || ||| | ||| ||||| |||||||||| |||||| || Sbjct 822387 GCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAATAA 822328 Query 400 GCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 459 || ||||||||| || |||||||||||||||| || ||| || ||||||||| || Sbjct 822327 GCATCGGCTAACTCTGTACCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCTAGA 822268 Query 460 ATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 || | ||||| |||||| || |||||||| || | ||| Sbjct 822267 ATGATTGGGGTGTAAAGCGTCTGTAGGTGGCTTTTCAAG 822229 >seq142263 Length=125487 Score = 273 bits (302), Expect = 7e-71 Identities = 263/334 (79%), Gaps = 4/334 (1%) Strand=Plus/Plus Query 169 TTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGG 228 ||||||||||||| || || | |||||||||||| |||||||||| | | |||| | Sbjct 66357 TTAGCTAGTTGGTG-GGCAATAGTTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAAGA 66415 Query 229 TGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGA 288 ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||||||||||| Sbjct 66416 TGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGA 66475 Query 289 ATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCG 348 || || | |||||||| ||||||||| | ||||| |||||||| | ||||||| || Sbjct 66476 ATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCCACG 66535 Query 349 GGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGGAAGCCCCGG 406 |||||| || ||| | ||| ||||| |||||| ||| | | || |||| ||| Sbjct 66536 GGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACAGTATCTAAAGAATAAGCATCGG 66595 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 || ||| ||||||||||||||||||| || || || ||||||||||||||| ||| Sbjct 66596 CTGACTCTGTGCCAGCAGCCGCGGTAAGACAACGGATGCAAGCGTTATCCGGAATGACT- 66654 Query 467 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||| ||| || |||||||| || | ||||| Sbjct 66655 GGGCGTGAAGCGTCTGTAGGTGGCTTTTCAAGTC 66688 >seq74089 Length=31305 Score = 260 bits (288), Expect = 4e-67 Identities = 271/353 (77%), Gaps = 3/353 (1%) Strand=Plus/Minus Query 150 AGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATC 209 |||| ||| |||||||||||||||||||||| ||| || |||||||||||||| |||| Sbjct 2506 AGGAGGGACTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATC 2447 Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 |||||| | |||| | ||||| |||||| ||| ||||||||| | ||| ||||||| Sbjct 2446 AGTAGCTAGTCCGAGAAGATGATCAGCCACACTGGGACTGAGACATGACCCAGACTCCTA 2387 Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329 |||||||||||||||| |||| || |||||||| ||||||||| | ||||| |||| | Sbjct 2386 CGGGAGGCAGCAGTGGAGAATTTTCTGCAATGGGCGAAAGCCTGACGAAGCAATGCCGTG 2327 Query 330 TGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTA 387 || | ||||||| | ||| || || ||| | ||| ||||| || ||||||| Sbjct 2326 TGGAGGTAGAAGGCCCACTGGTTGTGAACTTCTTTTCTCGGAGAAGAAGCAAGGACGGTA 2267 Query 388 CTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTA 447 |||||| |||| ||| ||||| |||||||||| |||| ||| || | | || | Sbjct 2266 TCTGAGGAATAAGCATCGGTTAACTCTGTGCCAGCAGTCGCGATAAGACAAAAGATGCAA 2207 Query 448 GCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | |||||||||||| | | |||||||| | || |||||||| || | ||||| Sbjct 2206 GTGTTATCCGGAATGA-TTGGGCGTAAGGCGTCTGTAGGTGGCTTTTCAAGTC 2155 >seq145771 Length=440912 Score = 221 bits (244), Expect = 4e-55 Identities = 215/276 (78%), Gaps = 2/276 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| || || |||| |||||||| ||||| |||| | Sbjct 15693 CGCGTCTGATTAGCTAGTTGGTGAGACAATAACTTATCAAGGCGATGATCACTAGCTGGT 15634 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||| | ||||| |||||| ||| ||||||||||| ||| |||||||||||||| || Sbjct 15633 CCGAGAAGATGATCAGCCACACTGGGACTGAGACACGACCCAGACTCCTACGGGAGGTAG 15574 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||| ||| || | |||||||||||||||||| | ||||| ||||||||| | || Sbjct 15573 CAGTGGGAAATTTTTCGCAATGGGCAAAAGCCTGACGGAGCAATGCCGCGTGAAGGTAGA 15514 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 ||||| || || || || ||| | ||| ||||| |||| ||||| |||||| Sbjct 15513 AGGCCCACGAGTTGTGAACTTCTTTTCTCGGAGAAGAAGCAATGGCGGTATCTGAGGAAT 15454 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAA 433 || | ||||||||| | ||||||| || |||||| Sbjct 15453 AAACATCGGCTAACTCTGAGCCAGCAACCACGGTAA 15418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495366344576