Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq74089 217 4e-54 seq148160 185 2e-44 seq127656 127 5e-27 seq104896 123 6e-26 seq48893 109 1e-21 seq111383 107 5e-21 seq142263 105 2e-20 seq5886 86.0 2e-14 seq44858 80.6 6e-13 seq144353 78.8 2e-12 seq63446 77.0 8e-12 seq79029 73.4 1e-10 >seq74089 Length=31305 Score = 217 bits (240), Expect = 4e-54 Identities = 254/342 (74%), Gaps = 1/342 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||| ||||| |||||||||| |||| ||| || | | || || Sbjct 2264 TGAGGAATAAGCATCGGTTAACTCTGTGCCAGCAGTCGCGATAAGACAAAAGATGCAAGT 2205 Query 65 GTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAA 124 |||||||||||| | ||||||||| | || |||||||| || | ||||| | || ||| Sbjct 2204 GTTATCCGGAATGATTGGGCGTAAGGCGTCTGTAGGTGGCTTTTCAAGTCCGCTGTCAAA 2145 Query 125 GGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA 184 | | |||||||||| || || | |||||| | ||| |||| | | ||||||| Sbjct 2144 TCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCA 2085 Query 185 AGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACC-AGTGGCGA 243 |||||| | ||| ||||||||||||| |||| || | | | ||||| | ||||| Sbjct 2084 GAGGGAATTTCCGGTGGAGCGGTGAAATGCTTAGAGATCGGAACGGACACCAAACGGCGA 2025 Query 244 AGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGAT 303 | || |||||| | | |||||||||||| ||||||| |||||||||| |||| Sbjct 2024 AAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGAT 1965 Query 304 TAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 ||||||||| ||||||| ||||||||||||| |||||||| Sbjct 1964 TAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGG 1923 >seq148160 Length=982571 Score = 185 bits (204), Expect = 2e-44 Identities = 248/344 (72%), Gaps = 1/344 (0%) Strand=Plus/Minus Query 5 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 64 |||||| |||| ||||||||| || |||||||||||||||| || ||| || ||| Sbjct 822337 TGAGGAATAAGCATCGGCTAACTCTGTACCAGCAGCCGCGGTAAGACAGAGGATGCAAGC 822278 Query 65 GTTATCCGGAATTACTGGGC-GTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAA 123 |||||| |||| | |||| |||||| || |||||||| || | ||| | | || || Sbjct 822277 GTTATCTAGAATGATTGGGGTGTAAAGCGTCTGTAGGTGGCTTTTCAAGCCCGCCGTCAA 822218 Query 124 AGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGC 183 | | | |||||||| | || || | ||||| | | | |||| | | |||||| Sbjct 822217 ATCCCAAGGCTCAACACTGGACAGGCGGTGTAAACTACCAAGTTGGAGTACGGTAGGGGC 822158 Query 184 AAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGA 243 | |||||| | ||| ||| ||||||||||| || || | | |||||||| | ||| Sbjct 822157 AGAGGGAATTTCCGGTGGAGCAGTGAAATGCGTGGAGATCGGAAAGAACACCAACGCCGA 822098 Query 244 AGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGAT 303 | || |||||| | | |||||||||||| ||||| | ||||||||| ||| Sbjct 822097 AAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAACTAGGGGAGCAAGTGAGAT 822038 Query 304 TAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTG 347 ||||| | | ||||||| ||||||||||||| |||||||||| Sbjct 822037 TAGATGCACCAGTAGTCCTAGCCGTAAACGATGGATACTAGGTG 821994 Score = 150 bits (166), Expect = 4e-34 Identities = 234/328 (71%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 82 GGCGTAAAGGGTGCGTAGGTGGTTTCTT-AAGTCAGAGGTGAAAGGCTATGGCTCAACCC 140 ||| ||||| || |||||||| || || ||||| | || ||| | | |||||||||| Sbjct 824755 GGCTTAAAGTGTCTGTAGGTGGCTTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCC 824696 Query 141 CGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTG 200 || || | |||| | | ||| ||| | | ||||||| |||||| || ||| Sbjct 824695 TGGACAGGCGGTGGAAATTACCAAGCTGTAGTACGGTAGGGGCAGAGGGAATTTCTGGTG 824636 Query 201 TAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACT 260 || | ||||||||||||| ||| | | |||||||| ||||| || |||||| | Sbjct 824635 GAGTGATGAAATGCGTAGAGATTGGAAAGAACACCAACAGCGAAAGCACTCTGCTGGGCC 824576 Query 261 GTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA-CCCTGGTAGT 319 | |||||||||||| |||||| |||||||||| || ||||||| ||| ||||| Sbjct 824575 GACACTGACACTGAGAGATGAAAGCTAGGGGAGCAAATGGGGTTAGATACCCCCAGTAGT 824516 Query 320 CCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT-AAGTGCTCCGGTGCCGCAGC 378 || |||||||| |||| |||||||| | | | ||| || | | | |||| | ||| Sbjct 824515 CCTAGCCGTAAATGATGGATACTAGGCG-CTGTGCGTATCGACCCGTGCAGTGCTGTAGC 824457 Query 379 AAACGCAATAAGTATTCC-ACCTGGGGA 405 ||||| ||||||| || |||||||| Sbjct 824456 TAACGCGTTAAGTATCCCGGCCTGGGGA 824429 Score = 113 bits (124), Expect = 1e-22 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66 |||| |||| ||||||||| ||||||||||||||||||| || ||| || ||||| Sbjct 776827 AGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGT 776886 Query 67 TATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGG 126 |||||||||| | ||||||||||| || |||||||| || | ||||| | || ||| Sbjct 776887 TATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGTCGTCAAATC 776946 Query 127 CTATGGCTCAACCCCGG 143 | | ||||||||| || Sbjct 776947 CCAGAGCTCAACCCTGG 776963 >seq127656 Length=346162 Score = 127 bits (140), Expect = 5e-27 Identities = 164/223 (74%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 |||||| || ||| |||||||||||||||||| || | | || ||||| || || || Sbjct 174205 GGAATTTCTGGTGGAGCGGTGAAATGCGTAGAAATCGGAAAGAGCACCAACGGAAAAAGC 174146 Query 248 GGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGA 307 |||||| | | |||||||||||| ||||||| |||||||||| |||||||| Sbjct 174145 ACACTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAGA 174086 Query 308 TACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT--AAGTGCT 365 |||| ||||||| ||| ||||| ||| |||||||| | | | | | || | || | Sbjct 174085 TACCTCAGTAGTCCTAGCCATAAACAATGGATACTAGGCG-CTGTGTGTATCGACCTG-T 174028 Query 366 CCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| | ||| ||||| ||||||| || || |||||||| Sbjct 174027 GCAGTGTTGTAGCTAACGCGTTAAGTATCCCGCCCGGGGAGTA 173985 >seq104896 Length=129203 Score = 123 bits (136), Expect = 6e-26 Identities = 236/344 (69%), Gaps = 14/344 (4%) Strand=Plus/Plus Query 2 ACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT----AGGG 57 ||| ||||| ||||||||| |||||| |||||||| |||||| |||| || || | Sbjct 99789 ACTCGAGGAAGAAGCCCCGACTAACTTCGTGCCAGTAGCCGCAGTAAGACAGGCAGAGAG 99848 Query 58 GGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGA 117 ||| || ||||| | |||| |||||| |||||||| ||||| || | || | Sbjct 99849 GGCAAGTGTTATTCAGAATGACTGGGTGTAAAGGGCATGTAGGCAGTGAATCGGGTTTCA 99908 Query 118 GGTGAAAGGCTATGGCTCAACCCCGG-GACTGCTTTTGAAAC---TGCAGGGCTAGAGTG 173 || ||| | | || | | || |||| | |||| | || || ||||| Sbjct 99909 AGTTCAAGTCAC---CAAAAACTAGCAGAATGCTCTCAAAACCAATTCA---CTTGAGTG 99962 Query 174 CAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACA 233 || || ||||||||| | |||||| || ||||| ||||| | | |||||| Sbjct 99963 AGATAGAGGAGAGTGGAATTTCGTGTGTAGGGGCGAAATCAATAGATCTACGAAGGAACG 100022 Query 234 CCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAG 293 ||| ||||||| ||| |||| || ||| ||| || ||||||| ||||||| Sbjct 100023 CCAAAAGCGAAGGTAGCTCTCTGGGTCCCTACCGACGCTGTGGTGCGAAAGCATGGGGAG 100082 Query 294 CAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||||||| || |||||| ||||||||| | ||||| ||||| Sbjct 100083 CAAACAGGAATAAATACCCCGGTAGTCCATGTTGTAAATGATGA 100126 >seq48893 Length=8260 Score = 109 bits (120), Expect = 1e-21 Identities = 135/181 (75%), Gaps = 3/181 (2%) Strand=Plus/Plus Query 229 GAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTG 288 |||||||| |||||| || |||||| | | |||||||||||| ||||||| Sbjct 8019 GAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAA 8078 Query 289 GGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348 ||||||||| ||||||||||||| ||||||| ||||||||||||| |||||||| | Sbjct 8079 GGGAGCAAATGGGATTAGATACCC-AGTAGTCCTAGCCGTAAACGATGTATACTAGGCG- 8136 Query 349 CGGGGCGCAT-AAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGT 407 | | ||| || | | | ||| | ||| ||||| ||||||| || | |||||||| Sbjct 8137 CTGTGCGTATCGACCCGTGCAGTGTTGTAGCTAACGCGTTAAGTATCCCGCTTGGGGAGT 8196 Query 408 A 408 | Sbjct 8197 A 8197 >seq111383 Length=4219 Score = 107 bits (118), Expect = 5e-21 Identities = 118/156 (76%), Gaps = 1/156 (1%) Strand=Plus/Plus Query 165 GCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTA 224 ||| |||| | | ||||||| |||||| | || || ||||||||||||||| ||| Sbjct 70 GCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGTTAAGTGGTGAAATGCGTAGAGATTG 129 Query 225 GGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAG 284 | | |||||||| |||||| || |||||| | | |||||||||||| |||||| Sbjct 130 GAAAGAACACCAACGGCGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAG 189 Query 285 CGTGGGGAGC-AAACAGGATTAGATACCCTGGTAGT 319 | ||||||| ||| ||||||||||||| ||||| Sbjct 190 CTAGGGGAGCAAAATGGGATTAGATACCCCAGTAGT 225 >seq142263 Length=125487 Score = 105 bits (116), Expect = 2e-20 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| ||||| ||| ||||||||||||||||||| || || || ||||||||||| Sbjct 66587 AAGCATCGGCTGACTCTGTGCCAGCAGCCGCGGTAAGACAACGGATGCAAGCGTTATCCG 66646 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||| ||||||||| ||| || |||||||| || | ||||| | || ||| | | || Sbjct 66647 GAATGACTGGGCGTGAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCAAGGG 66706 Query 133 CTCAACCCCGG 143 |||||||| || Sbjct 66707 CTCAACCCTGG 66717 >seq5886 Length=25564 Score = 86.0 bits (94), Expect = 2e-14 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 188 GGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 |||||| | ||| || ||||||||||||| ||||| | | |||||||| || || | | Sbjct 13090 GGAATTTCCGGTGGAGTGGTGAAATGCGTAAATATTGGAAAGAACACCAATGACGGAAG- 13148 Query 248 GGCT-TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 |||| |||| | | ||| |||||||| ||||| |||||||||| |||||| Sbjct 13149 GGCTCCACTGGGCCGACACTTACACTGAGAGATGAAAGTTAGGGGAGCAAATGTGATTAG 13208 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAATACT 342 || ||| ||||| ||| ||||||||| | ||| Sbjct 13209 ATGCCCCTGTAGTATTAGCCTTAAACGATGGACACT 13244 >seq44858 Length=691117 Score = 80.6 bits (88), Expect = 6e-13 Identities = 115/158 (73%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 ||||||| | ||| |||||||||||||||| | ||| | | |||||||| || |||| | Sbjct 439781 TGGAATTTCAGGTGGAGCGGTGAAATGCGTAAAGATTGGAAAGAACACCAATGACGAAAG 439722 Query 247 CGGCT-TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA 305 |||| |||| | | ||| |||||||| |||||| |||||| ||| ||||| Sbjct 439721 -GGCTCCACTGGGCCGACACTTACACTGAGAGATGAAAGCTAGGGGAGTAAATGTGATTA 439663 Query 306 GAT-ACCCTGGTAGTCCACGCCGTAAACGATGAATACT 342 ||| ||| ||||| ||| ||||| ||| | ||| Sbjct 439662 GATGGCCCCAGTAGTATTAGCCTTAAACAATGGACACT 439625 >seq144353 Length=56644 Score = 78.8 bits (86), Expect = 2e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66 |||| |||| || |||||| |||| ||||| ||||||| || ||| || || || Sbjct 6749 AGGAATAAGCATCGTCTAACTCTGTGCTAGCAGTTGCGGTAAGACAGAGGATGCAAGTGT 6808 Query 67 TATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 114 ||||| |||| | ||||||||||| || |||||||| || | ||||| Sbjct 6809 TATCCAGAATGATTGGGCGTAAAGCGTTTGTAGGTGGCTTTTCAAGTC 6856 >seq63446 Length=3070 Score = 77.0 bits (84), Expect = 8e-12 Identities = 102/142 (72%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||| | ||||||||||||||||| |||| || | | |||||||| || ||| | Sbjct 1824 AATTTTTGGTGTAGCGGTGAAATGCATAGAGATCAAAAAGAACACCAATGATGAAAGAAC 1765 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 | ||| || |||||||| ||| | ||||| ||| |||||| |||||||||| Sbjct 1764 TCTTCTGAGATGATACTGACACCGAGAGACAAAAGCAAGGGAAGCAAATGGGATTAGATA 1705 Query 310 CCCTGGTAGTCCACGCCGTAAA 331 ||| |||||| ||| |||| Sbjct 1704 CCCAAGTAGTCATAGCCATAAA 1683 >seq79029 Length=21013 Score = 73.4 bits (80), Expect = 1e-10 Identities = 102/143 (71%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 131 GGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGA 190 |||||||||| || || | |||||| | ||| |||| ||| ||||||| ||| Sbjct 19478 GGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACAGTAGGGGCAGAGGGA 19537 Query 191 ATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGC 250 ||| ||| |||||||||||||||||| || | | | |||||| |||||| || Sbjct 19538 ATTTTCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGGACACCAACGGCGAAAGCACT 19597 Query 251 TTGCTGGACTGTAACTGACACTG 273 |||||| | | | |||||||| Sbjct 19598 CTGCTGGGCCGACAATGACACTG 19620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201405439232