Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq148160 132 9e-29 seq127924 123 5e-26 seq122046 102 1e-19 seq102399 93.3 8e-17 seq129890 82.4 1e-13 seq145856 80.6 5e-13 seq148700 75.2 2e-11 >seq148160 Length=982571 Score = 132 bits (146), Expect = 9e-29 Identities = 178/243 (73%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||| | ||| | ||| |||| Sbjct 810663 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGG 810722 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| | Sbjct 810723 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCGAA 810775 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 810776 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 810832 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | |||||||| ||||| |||||||||||||||| || Sbjct 810833 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCATAGTAGCGGCGAGCGAAATGGGAGCAG 810892 Query 249 CCT 251 ||| Sbjct 810893 CCT 810895 >seq127924 Length=101365 Score = 123 bits (136), Expect = 5e-26 Identities = 176/243 (72%), Gaps = 11/243 (5%) Strand=Plus/Plus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||| | ||| | ||| |||| Sbjct 51652 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGCAAGCGACGAAATGCTTCGGG 51711 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| | Sbjct 51712 GAGTT-GAAAATAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCGAA 51764 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| |||||||| |||||||| ||| Sbjct 51765 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTAAAACATCTTAGT 51821 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | |||||||| ||||| | |||||||||||||| || Sbjct 51822 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCATAGTAGCGACGAGCGAAATGGGAGCAG 51881 Query 249 CCT 251 ||| Sbjct 51882 CCT 51884 >seq122046 Length=166258 Score = 102 bits (112), Expect = 1e-19 Identities = 171/243 (70%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 |||||| ||| ||| || || ||| ||||| | ||| | ||| | ||| |||| Sbjct 25294 GGTGGAGACCTAGGCAGCTAGAGACGAGGAAGGGCTTAGCAAGCGACGAAATGCTTCGGG 25235 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | || | | | |||||| ||||| |||||| || |||| ||| | Sbjct 25234 GAGTT-GAAAGTAAGCATAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCGAA 25182 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| || || | |||| || ||| || |||||||||||||| ||| Sbjct 25181 C--TGC-TGCTGAATCTATGGGCAGGCAAGAGACAACCTGGTGAACTGAAACATCTTAGT 25125 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| || |||||||| ||| | ||||||| ||||| ||||||| |||||||| || Sbjct 25124 AGCCAGAGAAAAAGAAAGCAAAAGCAATTCCCATAGTAGCGGCGAGCAAAATGGGAGCAG 25065 Query 249 CCT 251 ||| Sbjct 25064 CCT 25062 >seq102399 Length=5968 Score = 93.3 bits (102), Expect = 8e-17 Identities = 91/116 (78%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 || ||||| ||| || |||||| || ||| ||||||||||||||| | |||||| | Sbjct 4069 TGTTGAATCCATGGGCATGCAAGAGACAACCAGGCGAACTGAAACATTTTAGTAGCCAGA 4128 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||| ||| | ||||||| ||||| || |||||||||||| ||||| Sbjct 4129 GGAAAAGAAAGCAAAAGTAATTCCCATAGTAGCAGCAAGCGAAATGGGAGCAGCCT 4184 >seq129890 Length=200369 Score = 82.4 bits (90), Expect = 1e-13 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229 |||||||||||||||| ||||| ||||||||||| ||| | ||||| || ||||||| Sbjct 191606 CGAACTGAAACATCTA-GTAGCCAGAGGAAAAGAAAGCAAAAGTGATTCTCATAGTAGTG 191548 Query 230 GCGAGCGAAATGGGA 244 ||| ||||||||||| Sbjct 191547 GCGGGCGAAATGGGA 191533 >seq145856 Length=269562 Score = 80.6 bits (88), Expect = 5e-13 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 ||||||||||||||||| |||| | ||||||| ||| ||| | |||||||| ||||| Sbjct 15797 GGCGAACTGAAACATCTTAGTAACCAGAGGAAAATAAAGCAAAAGCGATTCCCATAGTAG 15856 Query 228 TGGCGAGCGAAATGGGA 244 |||||| ||||||||| Sbjct 15857 AGGCGAGTGAAATGGGA 15873 >seq148700 Length=539911 Score = 75.2 bits (82), Expect = 2e-11 Identities = 87/116 (75%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 || ||||| ||| | | |||| || ||| ||||||| |||||||| |||||| | Sbjct 213594 TGTTGAATCCATGAGCAGGCAAGAGACAACCTGGCGAACCAAAACATCTTAGTAGCCAGA 213653 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 |||||||||| ||| |||||| | ||||| ||||||| |||||| | ||||| Sbjct 213654 GGAAAAGAAAGCAAAAGAGATTGCAGTAGTAGCGGCGAGCAAAATGGAAGCAGCCT 213709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917030215584