Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq148160 201 4e-49 seq100388 161 3e-37 seq99156 154 5e-35 seq98533 145 3e-32 seq129160 129 2e-27 seq122046 120 1e-24 seq131530 114 4e-23 seq102399 114 4e-23 seq135456 93.3 1e-16 seq141009 91.5 5e-16 seq147975 89.7 2e-15 seq109409 87.8 6e-15 seq109749 80.6 9e-13 >seq148160 Length=982571 Score = 201 bits (222), Expect = 4e-49 Identities = 394/570 (69%), Gaps = 23/570 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 813022 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 812963 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | | |||| |||||||| ||||||||||||| |||||||||| | || |||||| Sbjct 812962 GTCCGGCCCGAGGAAACCTTTGCGCGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 812904 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || | || |||||||||| || Sbjct 812903 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTTCTGACACAAGGTTAGAATTC 812844 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || | || | |||| | Sbjct 812843 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCGCAAG-GAGGCCT--T 812787 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | | ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 812786 CTTCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTA 812729 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 812728 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 812669 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 |||||||| |||| | ||||||| | || |||||||||| ||||||| |||||| Sbjct 812668 TTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGG 812610 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 |||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 812609 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCAC 812550 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 |||||||| | ||| ||| || || | | |||| | ||| ||||| Sbjct 812549 CGGGGCTTC-GGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 812496 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||||||| || |||| Sbjct 812495 CCGGCACTGGGCAGGCGTCAGCCCCCATAC 812466 >seq100388 Length=97256 Score = 161 bits (178), Expect = 3e-37 Identities = 337/492 (68%), Gaps = 15/492 (3%) Strand=Plus/Plus Query 75 AACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACC 134 |||||||| ||||||||||||| |||||||||| | || |||||| ||||| | ||| Sbjct 88160 AACCTTTGCGCGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCATAGAAACTGTCTACC 88218 Query 135 AGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAG 191 | |||||||| || || | || |||||||||| || | | ||||| Sbjct 88219 TGAGACTGTCCCTTGGCCCGTAGGTTCTGACACAAGGTTAGAATTCTAGCTCTTCCAGAG 88278 Query 192 TGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTC-CCACCTA 250 |||||| ||| | | ||| | || || || || || | | | | ||||||| Sbjct 88279 TGGTATCTCATTGATGGCTC-AGGCCCCCTCGCAAGGAGGCCTTCTTTACCCTCCACCTA 88337 Query 251 TCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTT 309 || | ||| || || ||||| ||| | | ||| ||| | | |||||||| Sbjct 88338 AGCTGCGCAAGAATGGCCCAAAACCAATCCCAGGGAAAAGTAAAGCTTCATAGGGTCTTT 88397 Query 310 TCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| | || | | ||||||| || | | ||||||||| |||| | Sbjct 88398 CTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTC 88457 Query 370 TGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 428 ||||||| | || |||||||||| ||||||| |||||||||||||||||||||||| Sbjct 88458 CGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAA 88516 Query 429 TTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCG 488 |||||||||||||||| ||||||||||| |||||||| || |||||||| | ||| Sbjct 88517 TTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTC-GGTCGCCG 88575 Query 489 CCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGT 548 ||| || || | | |||| | ||| ||||||| |||| |||||||||| Sbjct 88576 GCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGT 88630 Query 549 CAGTCCGTATAC 560 ||| || |||| Sbjct 88631 CAGCCCCCATAC 88642 >seq99156 Length=695364 Score = 154 bits (170), Expect = 5e-35 Identities = 383/570 (67%), Gaps = 26/570 (5%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 339720 TCGACGAGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 339661 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| |||||||| ||||||||||||| |||||||||| | || |||||| Sbjct 339660 GTCCGACCCGAGGAAACCTTTGCGCGCCTCCGTTACCTTTTGGGAGGCCTAC-GCCCCAT 339602 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCC---AGATCATGGGCCAAGGTTAGATATC 177 ||||| | ||| | |||||||| || || | || |||||||||| || Sbjct 339601 AGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTTCTGACACAAGGTTAGAATTC 339542 Query 178 CACTACGGTCAGAGTGGTATTTCAACAACGACTC---CACAACCACTAGCGTGGCCGCAT 234 | | ||||||||||| ||| | | ||| | | || | || | |||| Sbjct 339541 TAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCTCCGCAAG-GAGGCCT--- 339486 Query 235 CATAGTCTCCCACCTATCCTACACA--AACCGCACCGAATGCCAATACCAAGCTATAGTG 292 | | | ||||||| || | || || || | || |||||| ||| | | ||| Sbjct 339485 --TCGCCCTCCACCTAAGCTGCGCAGGAAAGGCCC--AAAGCCAATCCCAGGGAACAGTA 339430 Query 293 AAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAA 351 ||| | | |||||||| |||| | || | | ||||||| || | | | Sbjct 339429 AAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTA 339370 Query 352 TTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGG 410 ||||| | |||| | ||||||| | || |||||||||| ||||||| ||| || Sbjct 339369 CTTCACTGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTGGG 339311 Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | Sbjct 339310 GACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGTCGCCGTTCAA 339251 Query 471 TGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTT 530 ||||| || | ||| ||| || || | | |||| | ||| ||||| Sbjct 339250 CGGGGC-TCCGGTCGCCGGCTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCTT 339197 Query 531 CCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 || |||| ||||||||| ||| || |||| Sbjct 339196 CCGGCACTGGGCAGGCGCCAGCCCCCATAC 339167 >seq98533 Length=86531 Score = 145 bits (160), Expect = 3e-32 Identities = 161/211 (76%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||||||| ||||| Sbjct 23410 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCG 23352 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| | Sbjct 23351 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGACCGTCGTTCA 23292 Query 470 CTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCT 529 | |||||||| | | ||| ||| || || | | |||| | ||| |||| Sbjct 23291 CCGGGGCTTCGGTCA-CCGACTC-----CCCTGTCATCAGGTCACCAACTTCCTTGACCT 23238 Query 530 TCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 ||| ||| ||||||||||||| || |||| Sbjct 23237 TCCGTCACTGGGCAGGCGTCAGCCCCCATAC 23207 >seq129160 Length=487704 Score = 129 bits (142), Expect = 2e-27 Identities = 105/125 (84%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||||||| ||||| Sbjct 12283 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTGCGGGTCG 12341 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | Sbjct 12342 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGTCGCCGTTCA 12401 Query 470 CTGGG 474 ||||| Sbjct 12402 CTGGG 12406 >seq122046 Length=166258 Score = 120 bits (132), Expect = 1e-24 Identities = 106/130 (82%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | |||||||| | || |||||||||| ||||| | || | Sbjct 23328 ATTTCACCGAGCCTATCTCTGAGACAGT-GCCTAGATCGTTACGCCTTTCGTACGAGTTG 23386 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 |||||||||||||||||||||||||||||||| || ||||||||||| |||| ||| | Sbjct 23387 GAACTTACCCGACAAGGAATTTCGCTACCTTAAGACCGTTATAGTTACGACCGTTGTTCA 23446 Query 470 CTGGGGCTTC 479 | |||||||| Sbjct 23447 CCGGGGCTTC 23456 >seq131530 Length=10543 Score = 114 bits (126), Expect = 4e-23 Identities = 131/175 (75%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 || ||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||||| Sbjct 5398 TCATTACGCCTTTCGTGCGGGTCAGAACTTACCCGACAAGGAATTTCACTACCTTAGGAC 5339 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505 ||||||||||| ||||||||| | | ||| || | | ||| ||| || || Sbjct 5338 TGTTATAGTTACGACCGCCGTTCATCGTGGCATCGGTCA-CCGGCTC-----CCCTGTCA 5285 Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATAC 560 | | |||| | ||| |||||| ||| ||||||||||||| || |||| Sbjct 5284 TCAGGTCACCAACTTCCTTGACCTTCTGTCACTGGGCAGGCGTCAGCCCCCATAC 5230 >seq102399 Length=5968 Score = 114 bits (126), Expect = 4e-23 Identities = 105/130 (81%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 351 ATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCG 409 ||||||||| |||| | ||||||| | || |||||||||| ||||| ||||| Sbjct 5958 ATTTCACCGAGCCTCTCTCCGAGACAGT-GCCCAGATCGTTACGCCTTTCGTATGGGTCG 5900 Query 410 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTA 469 ||||||||||||||||||||| ||| |||||||| |||||||||| ||||||||| | Sbjct 5899 AAACTTACCCGACAAGGAATTTTGCTTCCTTAGGACCGTTATAGTTATGACCGCCGTTCA 5840 Query 470 CTGGGGCTTC 479 | |||||||| Sbjct 5839 CCGGGGCTTC 5830 >seq135456 Length=801588 Score = 93.3 bits (102), Expect = 1e-16 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 |||||| ||| ||| || |||||||||||||||| |||| ||||| ||||||||||||| Sbjct 349966 TCGTTATGCCTTTCTTGTGGGTCGGAACTTACCCGGCAAGAAATTTTGCTACCTTAGGAT 349907 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTC 479 |||||||||| |||| || | |||||||| Sbjct 349906 CTTTATAGTTACGGGCGCCATTGATCGGGGCTTC 349873 >seq141009 Length=26560 Score = 91.5 bits (100), Expect = 5e-16 Identities = 97/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 22632 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 22691 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||| |||||||||||||||||||||| |||||||||| | | ||||||| Sbjct 22692 GTCCGACCCGAGGAAACCTTTGGGCGCCTCCGTTACCTTTTGGGAGGCCTA-CGCCCCAT 22750 Query 121 TTAAACT 127 ||||| Sbjct 22751 AGAAACT 22757 >seq147975 Length=425593 Score = 89.7 bits (98), Expect = 2e-15 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 411 AACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 ||||||||| ||||| ||||| ||||||||||||| ||||||||||| ||||||||| || Sbjct 70389 AACTTACCCAACAAGAAATTTTGCTACCTTAGGATCGTTATAGTTACGACCGCCGTTCAC 70448 Query 471 TGGGGCTTC 479 ||||||| Sbjct 70449 CAGGGCTTC 70457 >seq109409 Length=1395 Score = 87.8 bits (96), Expect = 6e-15 Identities = 101/135 (75%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 12 GTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGA 71 |||| |||||||||||||||| ||| ||||||||| | || || | | |||| Sbjct 1114 GTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCCCCGTTCGGCCTGA 1173 Query 72 GGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCC 131 || |||||||| ||||||||||||| |||||||| | | | ||||||| ||||| | Sbjct 1174 GGAAACCTTTGCGCGCCTCCGTTACCTTTTGGGAAGCCTA-CGCCCCATAGAAACTGTCT 1232 Query 132 ACCAGGCACTGTCCC 146 | | | |||||||| Sbjct 1233 AACTGAGACTGTCCC 1247 >seq109749 Length=103046 Score = 80.6 bits (88), Expect = 9e-13 Identities = 97/128 (76%), Gaps = 3/128 (2%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| || |||| |||||||||||||||| ||| ||||||||| | || || Sbjct 51194 TCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTATGCCCTTACACTCGAGGGCCAATCTCC 51253 Query 61 AACCAGGCT-GAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA 119 || | || |||| |||||||| ||||||||||||| |||||||| | | | ||||||| Sbjct 51254 GTCC-GACTCGAGGAAACCTTTGCGCGCCTCCGTTACCTTTTGGGATGCCTA-CGCCCCA 51311 Query 120 GTTAAACT 127 ||||| Sbjct 51312 TAGAAACT 51319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1699860887424