Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq142263 116 8e-24 seq148160 114 3e-23 seq145771 96.9 7e-18 seq74089 96.9 7e-18 seq104896 77.0 7e-12 >seq142263 Length=125487 Score = 116 bits (128), Expect = 8e-24 Identities = 162/228 (71%), Gaps = 18/228 (8%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||| ||||||||||||||| | || ||| || | Sbjct 66615 GGCTGCTGGCACAGAGTCAGCCGATGCTTATTCTTTAGATACTGTCAT-----------T 66567 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 66566 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 66514 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 66513 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 66454 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 |||| ||| |||||||||||| ||| ||||| || | || |||| || Sbjct 66453 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGA 66406 >seq148160 Length=982571 Score = 114 bits (126), Expect = 3e-23 Identities = 192/279 (69%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 776861 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTTAGATACCATCAT-----------T 776813 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| || || Sbjct 776812 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCATGC 776760 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || || ||||| || ||||| |||||||||||||||||| Sbjct 776759 GGCATTGCTCCATCAGGCTTTCTCCCATTACAGAAAATTCCCCACTGCTGCCTCCCGTAG 776700 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | || |||| || | ||| || Sbjct 776699 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 776640 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 776639 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 776601 Score = 105 bits (116), Expect = 1e-20 Identities = 191/279 (68%), Gaps = 19/279 (7%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 ||||||||| || |||||||||||||||||||| | || ||| || | Sbjct 822301 GGCTGCTGGTACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 822349 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 822350 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 822402 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| || ||| || ||||| |||||||||||||||||| Sbjct 822403 GGCATTGCTCCGTCAGGCTTTCGCCC-TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 822461 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| || |||||||||||| ||| ||||| || | || |||| || | ||| || Sbjct 822462 GAGTCTGAGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAACTACTGAT 822521 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | || ||| || || || | || |||| ||||| Sbjct 822522 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 822560 >seq145771 Length=440912 Score = 96.9 bits (106), Expect = 7e-18 Identities = 111/148 (75%), Gaps = 1/148 (1%) Strand=Plus/Plus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| |||| ||| | ||||| ||||||||| | | ||| |||| || Sbjct 15488 AAAAGAAGTTCACAACTCGTGGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 15546 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 | | |||||| || ||| | ||||||| |||||||||||||| ||| |||||||||| Sbjct 15547 TTGCCCATTGCGAAAAATTTCCCACTGCTACCTCCCGTAGGAGTCTGGGTCGTGTCTCAG 15606 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228 | ||| ||||| || | || |||| || Sbjct 15607 TCCCAGTGTGGCTGATCATCTTCTCGGA 15634 >seq74089 Length=31305 Score = 96.9 bits (106), Expect = 7e-18 Identities = 187/277 (68%), Gaps = 18/277 (6%) Strand=Plus/Plus Query 3 CTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGTGG 62 |||||||||| |||||| ||||||||||||| | || ||| | | || Sbjct 2230 CTGCTGGCACAGAGTTAACCGATGCTTATTCCTCAGATACCGTC-----------CTTGC 2278 Query 63 AAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTA 122 || ||| | | |||||||||| |||| | || | ||||| ||| ||| | Sbjct 2279 ------TTCTTCTCCGAGAAAAGAAGTTCACAACCAGTGGG-CCTTCTACCTCCACACGG 2331 Query 123 CTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGA 182 | | ||| |||| || ||| |||||| || |||| |||||||||||||||||||| Sbjct 2332 CATTGCTTCGTCAGGCTTTCGCCCATTGCAGAAAATTCTCCACTGCTGCCTCCCGTAGGA 2391 Query 183 GTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCG 242 || ||| | ||||||||| ||| ||||| || | || |||| || ||| ||| Sbjct 2392 GTCTGGGTCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACTAGCTACTGATCA 2451 Query 243 TAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | || ||| || || || | || |||| ||||| Sbjct 2452 TCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 2488 >seq104896 Length=129203 Score = 77.0 bits (84), Expect = 7e-12 Identities = 135/197 (69%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107 TTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACT 166 ||| || |||||| | | |||| ||| || ||| ||||| |||| |||||||| | Sbjct 99738 TTCTTCACTCACGCGATATTACTGGATCAAGCTTTCGCCCATTATCCAAGATTCCTCATT 99679 Query 167 GCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCA 226 ||| | ||| ||||| ||| || ||||||||| ||| ||||| || | ||| | Sbjct 99678 ATTGCTCCACGTTGGAGTCTGGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCCAAAAA 99619 Query 227 GAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGC 286 || | ||| |||| | |||| || || |||| ||||||||||||| |||| Sbjct 99618 GACCAGCTAAGCATCATTGGCTTGGACAACCTCTACCTGACCTACTACCTAATATTACGC 99559 Query 287 ATCCCCATCGTACACCG 303 | | |||| ||| || Sbjct 99558 AGGCTCATCAAACATCG 99542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067205895488