Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020
17-04-04] 149,149 sequences; 2,687,664,729 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq142263 116 8e-24
seq148160 114 3e-23
seq145771 96.9 7e-18
seq74089 96.9 7e-18
seq104896 77.0 7e-12
>seq142263
Length=125487
Score = 116 bits (128), Expect = 8e-24
Identities = 162/228 (71%), Gaps = 18/228 (8%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||| ||||||||||||||| | || ||| || |
Sbjct 66615 GGCTGCTGGCACAGAGTCAGCCGATGCTTATTCTTTAGATACTGTCAT-----------T 66567
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 66566 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 66514
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| |||||| || ||||| ||||||||||||||||||
Sbjct 66513 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 66454
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228
|||| ||| |||||||||||| ||| ||||| || | || |||| ||
Sbjct 66453 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGA 66406
>seq148160
Length=982571
Score = 114 bits (126), Expect = 3e-23
Identities = 192/279 (69%), Gaps = 18/279 (6%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
|||||||||||| |||||||||||||||||||| | || ||| || |
Sbjct 776861 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTTAGATACCATCAT-----------T 776813
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | | |||||||||| || | |||| | ||||| ||| || ||
Sbjct 776812 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCATGC 776760
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || || ||||| || ||||| ||||||||||||||||||
Sbjct 776759 GGCATTGCTCCATCAGGCTTTCTCCCATTACAGAAAATTCCCCACTGCTGCCTCCCGTAG 776700
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| ||| |||||||||||| ||| ||||| || | || |||| || | ||| ||
Sbjct 776699 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAGCTACTGAT 776640
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | | || ||| || || || | || |||| |||||
Sbjct 776639 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 776601
Score = 105 bits (116), Expect = 1e-20
Identities = 191/279 (68%), Gaps = 19/279 (7%)
Strand=Plus/Plus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60
||||||||| || |||||||||||||||||||| | || ||| || |
Sbjct 822301 GGCTGCTGGTACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 822349
Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120
| || ||| | | |||||||||| || | |||| | ||||| ||| |||||
Sbjct 822350 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 822402
Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180
| | ||| |||| || ||| || ||| || ||||| ||||||||||||||||||
Sbjct 822403 GGCATTGCTCCGTCAGGCTTTCGCCC-TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 822461
Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240
|||| || |||||||||||| ||| ||||| || | || |||| || | ||| ||
Sbjct 822462 GAGTCTGAGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACCAACTACTGAT 822521
Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | || ||| || || || | || |||| |||||
Sbjct 822522 CATCACCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 822560
>seq145771
Length=440912
Score = 96.9 bits (106), Expect = 7e-18
Identities = 111/148 (75%), Gaps = 1/148 (1%)
Strand=Plus/Plus
Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140
|||||||||| |||| ||| | ||||| ||||||||| | | ||| |||| ||
Sbjct 15488 AAAAGAAGTTCACAACTCGTGGG-CCTTCTACCTTCACGCGGCATTGCTCCGTCAGGCTT 15546
Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200
| | |||||| || ||| | ||||||| |||||||||||||| ||| ||||||||||
Sbjct 15547 TTGCCCATTGCGAAAAATTTCCCACTGCTACCTCCCGTAGGAGTCTGGGTCGTGTCTCAG 15606
Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGA 228
| ||| ||||| || | || |||| ||
Sbjct 15607 TCCCAGTGTGGCTGATCATCTTCTCGGA 15634
>seq74089
Length=31305
Score = 96.9 bits (106), Expect = 7e-18
Identities = 187/277 (68%), Gaps = 18/277 (6%)
Strand=Plus/Plus
Query 3 CTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGTGG 62
|||||||||| |||||| ||||||||||||| | || ||| | | ||
Sbjct 2230 CTGCTGGCACAGAGTTAACCGATGCTTATTCCTCAGATACCGTC-----------CTTGC 2278
Query 63 AAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTA 122
|| ||| | | |||||||||| |||| | || | ||||| ||| ||| |
Sbjct 2279 ------TTCTTCTCCGAGAAAAGAAGTTCACAACCAGTGGG-CCTTCTACCTCCACACGG 2331
Query 123 CTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGA 182
| | ||| |||| || ||| |||||| || |||| ||||||||||||||||||||
Sbjct 2332 CATTGCTTCGTCAGGCTTTCGCCCATTGCAGAAAATTCTCCACTGCTGCCTCCCGTAGGA 2391
Query 183 GTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCG 242
|| ||| | ||||||||| ||| ||||| || | || |||| || ||| |||
Sbjct 2392 GTCTGGGTCATGTCTCAGTCCCAGTGTGGCTGATCATCTTCTCGGACTAGCTACTGATCA 2451
Query 243 TAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279
| | || ||| || || || | || |||| |||||
Sbjct 2452 TCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 2488
>seq104896
Length=129203
Score = 77.0 bits (84), Expect = 7e-12
Identities = 135/197 (69%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 107 TTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACT 166
||| || |||||| | | |||| ||| || ||| ||||| |||| |||||||| |
Sbjct 99738 TTCTTCACTCACGCGATATTACTGGATCAAGCTTTCGCCCATTATCCAAGATTCCTCATT 99679
Query 167 GCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCA 226
||| | ||| ||||| ||| || ||||||||| ||| ||||| || | ||| |
Sbjct 99678 ATTGCTCCACGTTGGAGTCTGGGCCATGTCTCAGTCCCAGTGTGGCTGATCATCCAAAAA 99619
Query 227 GAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGC 286
|| | ||| |||| | |||| || || |||| ||||||||||||| ||||
Sbjct 99618 GACCAGCTAAGCATCATTGGCTTGGACAACCTCTACCTGACCTACTACCTAATATTACGC 99559
Query 287 ATCCCCATCGTACACCG 303
| | |||| ||| ||
Sbjct 99558 AGGCTCATCAAACATCG 99542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1067205895488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |