Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phalaenopsis_20hybrid_20cultivar_20[genbank_20GCA_5F002079205.1_2020 17-04-04] 149,149 sequences; 2,687,664,729 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq120628 104 4e-20 seq146634 100 5e-19 seq58524 98.7 2e-18 seq145263 84.2 4e-14 seq139222 84.2 4e-14 seq148293 82.4 1e-13 seq141741 82.4 1e-13 seq77669 82.4 1e-13 seq108937 80.6 4e-13 seq18143 78.8 2e-12 seq134638 75.2 2e-11 seq72492 75.2 2e-11 >seq120628 Length=161120 Score = 104 bits (114), Expect = 4e-20 Identities = 93/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 48171 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 48114 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||| | ||| |||||||| |||||||||||||||||||||||| Sbjct 48113 GGCGCGAAGCTACCGTGTGCAGGATTATGACTGAACGCCTCTAAGTCAGAATCC 48060 >seq146634 Length=280028 Score = 100 bits (110), Expect = 5e-19 Identities = 92/114 (81%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | |||||||| | ||| || ||| || |||| Sbjct 158354 GTACGAGAGGAACCGTTGA-TTCACA-TAATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 158297 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||| | ||| |||||||| |||||| ||||||||||||| ||| Sbjct 158296 GGCGCGAAGCTACCGTGTGCAGGATTATGACTGAACACCTCTAAGTCAGAGTCC 158243 >seq58524 Length=46655 Score = 98.7 bits (108), Expect = 2e-18 Identities = 94/118 (80%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 || |||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 33450 GTCCGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 33393 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | |||||||||||| | ||| |||||||| ||||| |||||||||||||||||| ||| Sbjct 33392 GGCGCGAAGCTACCGTGTGCAGGATTATGACTGAATGCCTCTAAGTCAGAATCCGTGC 33335 >seq145263 Length=152952 Score = 84.2 bits (92), Expect = 4e-14 Identities = 88/113 (78%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 |||||||||||||| || |||| | |||| | | | | || ||| || ||||| Sbjct 26023 TACGAGAGGAACCGTTGA-TTCACAC-AATTAATCATCGTGCTTGGTTGAAAAGCCAGTG 26080 Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || ||||||||| | ||| |||||||| |||||||||||||||||||||||| Sbjct 26081 GCGTGAAGCTACCGTGTGCAGGATTATGACTGAACGCCTCTAAGTCAGAATCC 26133 >seq139222 Length=44776 Score = 84.2 bits (92), Expect = 4e-14 Identities = 91/118 (77%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| || |||| | |||||| | || || ||| || ||| Sbjct 41763 GTACGAGAGGAACCATTGA-TTCACA-TAATTGCCCATCTCGCTTGGTTGAAAAGCTAGT 41706 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | |||||||||||||| ||| ||| |||| |||||| |||||||||||||||||| || Sbjct 41705 GGCGCGAAGCTACCATGTGCAGGAATATGACTGAACTCCTCTAAGTCAGAATCCACGC 41648 >seq148293 Length=456875 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||| |||| || || |||| | ||||||| || ||| || ||| || ||| Sbjct 266062 GTACGAGCGGAATCGTTGA-TTCACAC-AATTGGTCTTCGCGTTTGGTTGAAAAGCTAGT 266005 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||| || |||||||| ||||| ||| ||||||||||||| Sbjct 266004 GGCGCGAAGCTACCATGTGTAGGATTATGATTGAACACCTTTAAGTCAGAATCC 265951 >seq141741 Length=129428 Score = 82.4 bits (90), Expect = 1e-13 Identities = 87/112 (78%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 3 ACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGC 62 |||||||||||| || |||| | |||||||| | || || ||| || |||| Sbjct 89770 ACGAGAGGAACCATTGA-TTCACA-TAATTGGTCATCACGCTTGGTTGAAAAGCTAGTGG 89713 Query 63 CGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||| ||||||| | ||| |||||||| |||||||||||||||||||||||| Sbjct 89712 CGCAAAGCTACTGTGTGCAGGATTATGACTGAACGCCTCTAAGTCAGAATCC 89661 >seq77669 Length=22915 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||| |||| || || |||| | ||||||| || ||| || ||| || ||| Sbjct 13568 GTACGAGCGGAATCGTTGA-TTCACAC-AATTGGTCTTCGCGTTTGGTTGAAAAGCTAGT 13625 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||| || |||||||| ||||| ||| ||||||||||||| Sbjct 13626 GGCGCGAAGCTACCATGTGTAGGATTATGATTGAACACCTTTAAGTCAGAATCC 13679 >seq108937 Length=379869 Score = 80.6 bits (88), Expect = 4e-13 Identities = 81/103 (79%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||| | ||||||| | ||| || ||| || |||| Sbjct 376452 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 376395 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTA 103 | |||||||||||| | ||| |||||||| ||||||||| ||| Sbjct 376394 GGCGCGAAGCTACCGTGTGCAGGATTATGACTGAACGCCCCTA 376352 >seq18143 Length=366319 Score = 78.8 bits (86), Expect = 2e-12 Identities = 86/112 (77%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||| ||||||| || |||| | ||||||| || ||| | ||| || || | Sbjct 99880 GTACGAGCGGAACCGTTGA-TTCACAC-AATTGGTCTTCGCGCTTAGTTGAAAAGCCAAT 99937 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 | | |||||||||| | || |||||||| |||||||||| ||||||||||| Sbjct 99938 GGCACGAAGCTACCGTGTGTAGGATTATGACTGAACGCCTTTAAGTCAGAAT 99989 >seq134638 Length=352617 Score = 75.2 bits (82), Expect = 2e-11 Identities = 89/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| ||||||||| |||||| | ||||| | |||| || ||| || ||| Sbjct 244291 GTACAAGAGGAACCATT-AATTCACAC-AATTGATCATTGCTCTTGGTTGAAAAGCTAGT 244234 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | ||||||||| || | ||| ||| |||| |||||| |||||||||||||||||| || Sbjct 244233 GGCGCGAAGCTGCCGTGTGCAGGAATATGACTGAACTCCTCTAAGTCAGAATCCACGC 244176 >seq72492 Length=11854 Score = 75.2 bits (82), Expect = 2e-11 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 || ||||| | |||||||||| | ||| |||||||| ||||||||||||||||| ||||| Sbjct 2332 AGCCAGTGGCACGAAGCTACCGTGTGCAGGATTATGACTGAACGCCTCTAAGTCGGAATC 2273 Query 114 C 114 | Sbjct 2272 C 2272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818016353536