Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq80317 230 6e-58 seq80316 201 3e-49 seq245 104 6e-20 seq135 104 6e-20 seq149 89.7 1e-15 seq2958 86.0 2e-14 seq659 84.2 6e-14 seq38508 75.2 3e-11 >seq80317 Length=158462 Score = 230 bits (254), Expect = 6e-58 Identities = 297/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 103984 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 104043 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 104044 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 104103 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 104104 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 104163 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 104164 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 104223 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 104224 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 104283 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 104284 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 104343 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 104344 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 104392 Score = 230 bits (254), Expect = 6e-58 Identities = 297/409 (73%), Gaps = 2/409 (0%) Strand=Plus/Minus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| ||||||||| ||||||||| ||||||||||||||||||| || ||| ||| Sbjct 140677 TATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGC 140618 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | | ||| | | || Sbjct 140617 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGT 140558 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGA 182 ||||||| ||||| |||| ||| || | | ||| | || |||| | || Sbjct 140557 CAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGG 140498 Query 183 GGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGG 242 || | |||||| | ||| ||| |||||||||||||| || | | ||||||||| || Sbjct 140497 GGCAGAGGGAATTTCCGGTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAACGG 140438 Query 243 CGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAG 302 |||| ||| | ||||| |||||||| || | |||||||| |||||||||| | Sbjct 140437 CGAAAGCACTCTGCTGGGCCGACACTGACACTGAGAGACGAAAGCTAGGGGAGCAAATGG 140378 Query 303 GATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTACT 362 |||||||||||| ||||||| ||| |||||||| ||||| | || | | | Sbjct 140377 GATTAGATACCCCAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGCTGTGCGTATCGA 140318 Query 363 TCCTTG--GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || || || ||||||||||||| |||| ||||||||||| ||| Sbjct 140317 CCCGTGCAGTGCTGTAGCTAACGCGTTAAGTATCCCGCCTGGGGAGTAC 140269 >seq80316 Length=715001 Score = 201 bits (222), Expect = 3e-49 Identities = 247/334 (74%), Gaps = 10/334 (3%) Strand=Plus/Plus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| | Sbjct 682206 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 682265 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124 || ||||||| ||||||||||||| | || ||||||| | | || || ||| Sbjct 682266 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 682322 Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 || | | | || |||| | | ||| | | || ||| ||||| | ||||| Sbjct 682323 AAGTCGC---CAAAAACTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAG 682379 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| ||||||| ||||||| | | |||||| |||| || Sbjct 682380 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGTAGATCTACGAAGGAACGCCAAAAGC 682439 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | ||||||| |||||||| || ||| Sbjct 682440 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAATAGG 682499 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 682500 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 682533 >seq245 Length=451909 Score = 104 bits (114), Expect = 6e-20 Identities = 223/328 (68%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 |||||| | ||||||||| |||||||||||||||||| | | ||||||||||| Sbjct 353270 AATAAGTATCGGCTAACTTTATGCCAGCAGCCGCGGTAAGATAGAACATGCAAGCGTTAT 353211 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131 ||| ||| | | |||||||||| | ||| | | | ||| | ||| ||||| | Sbjct 353210 TCGAAATGATGAGACGTAAAGCGTCTGTAGGTAGCTTTTCAAGTCCACTGTCAAATCTCA 353151 Query 132 GGGCTTAACCTGGGAATTGCATTTGTGACT-GCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| ||||| || || | | ||| || | || |||| | | |||| | | Sbjct 353150 GGGCTCAACCTTAGACAGGCGGTGGAAACTATCAAG-CTGGAGTACGATA-AGGGCAGAG 353093 Query 191 -GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||| ||| |||||||||||||||||| || | | |||||| || ||| || || Sbjct 353092 AAAATTTTCGGTGGAGCAGTGAAATGCGTAGAGATCGGAAAGAACACTAACGGCAAAAGC 353033 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | || | | |||||| || |||||||| | |||||| |||||||| Sbjct 353032 ACTCTGCTAAGCCGATACTGACACTGCGAGACGAAAGCTAGAAAAGCAAATGGGATTAGA 352973 Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||| | |||| ||| |||||||| Sbjct 352972 TACCCCAATTGTCCTAGCCGTAAACGAT 352945 >seq135 Length=732566 Score = 104 bits (114), Expect = 6e-20 Identities = 223/328 (68%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 12 AATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAA 71 |||||| | ||||||||| |||||||||||||||||| | | ||||||||||| Sbjct 731395 AATAAGTATCGGCTAACTTTATGCCAGCAGCCGCGGTAAGATAGAACATGCAAGCGTTAT 731454 Query 72 TCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCC 131 ||| ||| | | |||||||||| | ||| | | | ||| | ||| ||||| | Sbjct 731455 TCGAAATGATGAGACGTAAAGCGTCTGTAGGTAGCTTTTCAAGTCCACTGTCAAATCTCA 731514 Query 132 GGGCTTAACCTGGGAATTGCATTTGTGACT-GCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||||| ||||| || || | | ||| || | || |||| | | |||| | | Sbjct 731515 GGGCTCAACCTTAGACAGGCGGTGGAAACTATCAAG-CTGGAGTACGATA-AGGGCAGAG 731572 Query 191 -GAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 |||| ||| |||||||||||||||||| || | | |||||| || ||| || || Sbjct 731573 AAAATTTTCGGTGGAGCAGTGAAATGCGTAGAGATCGGAAAGAACACTAACGGCAAAAGC 731632 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 | | || | | |||||| || |||||||| | |||||| |||||||| Sbjct 731633 ACTCTGCTAAGCCGATACTGACACTGCGAGACGAAAGCTAGAAAAGCAAATGGGATTAGA 731692 Query 310 TACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||| | |||| ||| |||||||| Sbjct 731693 TACCCCAATTGTCCTAGCCGTAAACGAT 731720 >seq149 Length=687274 Score = 89.7 bits (98), Expect = 1e-15 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 233 ACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGG 292 || |||| ||||||||||| | ||||| || |||||| | ||||||| |||| Sbjct 687128 ACGCCAAAAGCGAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGG 687187 Query 293 GAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAAC 334 |||| || |||||||||||||||||||||||| ||| ||||| Sbjct 687188 GAGCGAATAGGATTAGATACCCTGGTAGTCCATGCCGTAAAC 687229 >seq2958 Length=14584 Score = 86.0 bits (94), Expect = 2e-14 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 2 ATACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTG 61 ||| |||| ||| ||||| ||||||||| ||||||||||||||||||| || ||| || Sbjct 11286 ATATCTGAGGAAAAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATG 11227 Query 62 CAAGCGTTAATCGGAAT 78 ||||||||| |||||| Sbjct 11226 CAAGCGTTATCCGGAAT 11210 >seq659 Length=144163 Score = 84.2 bits (92), Expect = 6e-14 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 ||| ||| |||||||||||||| || | | |||||||||||||||| ||| | |||| Sbjct 115970 GTGGAGCGGTGAAATGCGTAGAGATCGGAAAGAACACCAATGGCGAAAGCACTCTGCTGG 116029 Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAG 308 | |||||||| | | |||||||| |||||||||| ||||||| Sbjct 116030 GCCGACACTGACAATGAGAGACGAAAGCTAGGGGAGCAAATGGGATTAG 116078 >seq38508 Length=890 Score = 75.2 bits (82), Expect = 3e-11 Identities = 107/150 (71%), Gaps = 12/150 (8%) Strand=Plus/Minus Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 ||| ||| |||||||||||||| || | ||||||||| |||||| ||| | |||| Sbjct 589 GTGGAGCGGTGAAATGCGTAGAGATCGAAAAGAACACCAACGGCGAAAGCACTCTGCTGG 530 Query 260 GATAACACTGACGCTCA---TG-CAC--------GAAAGCGTGGGGAGCAAACAGGATTA 307 | |||||||| || | || ||| |||||| ||| || ||| |||||| Sbjct 529 GCCGACACTGACACTGACACTGACACTGAGAGATGAAAGCTAGGGAAGTAAATGGGATTA 470 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||| ||||||| ||| |||||||| Sbjct 469 TATACCCCAGTAGTCCTAGCCGTAAACGAT 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1288564231968