Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= AAMG01001138.1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
seq80317 107 2e-21
seq80316 107 2e-21
seq144 91.5 2e-16
seq7875 80.6 3e-13
seq292 77.0 4e-12
seq2519 75.2 1e-11
seq113 75.2 1e-11
>seq80317
Length=158462
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Minus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 109541 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 109482
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 109481 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 109423
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 109422 ACAAGGAATTTCGCTACCTTAGGACCGTTA 109393
Score = 107 bits (118), Expect = 2e-21
Identities = 113/150 (75%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84
|||||||| |||| || |||| || |||||||||| || | | ||||||| |||
Sbjct 135120 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 135179
Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143
| | | | ||||||| ||| || ||||||| ||||||||||||||||
Sbjct 135180 C-CTCTCTCCGAGACAGTGCCCAGATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCG 135238
Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||
Sbjct 135239 ACAAGGAATTTCGCTACCTTAGGACCGTTA 135268
>seq80316
Length=715001
Score = 107 bits (118), Expect = 2e-21
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82
||||||||| |||| || |||| || |||||||||| || | | ||||||||| |
Sbjct 219334 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCG 219275
Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142
| || | ||||||| |||||||||||||||||||| ||||| |
Sbjct 219274 GGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGCAGGTCGCTACTTATGC 219215
Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173
|||||||||||||||||||||||||| ||||
Sbjct 219214 GACAAGGAATTTCGCTACCTTAGGACAGTTA 219184
>seq144
Length=696361
Score = 91.5 bits (100), Expect = 2e-16
Identities = 55/58 (95%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 170
||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 226307 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCG 226250
>seq7875
Length=3293
Score = 80.6 bits (88), Expect = 3e-13
Identities = 44/44 (100%), Gaps = 0/44 (0%)
Strand=Plus/Minus
Query 130 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 1507
>seq292
Length=382658
Score = 77.0 bits (84), Expect = 4e-12
Identities = 53/59 (90%), Gaps = 1/59 (2%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171
|||||| ||| ||||||| ||||||||||||| |||||||||||||||||||||| ||
Sbjct 252373 TACACCTTTCATGCAGGTTAGAACTTACCCGAC-AGGAATTTCGCTACCTTAGGACTGT 252430
>seq2519
Length=18596
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || || |||| ||||||||||||| ||||||||||||||||||||| ||||| ||
Sbjct 4976 TACGCCTTTTATGCAAGTCGGAACTTACCTGACAAGGAATTTCGCTACCTTTGGACCATT 4917
Query 173 A 173
|
Sbjct 4916 A 4916
>seq113
Length=813259
Score = 75.2 bits (82), Expect = 1e-11
Identities = 53/61 (87%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172
||| || |||||| | | ||||||||| ||||||||||||||||| |||||||||||||
Sbjct 534967 TACGCCTTTCGTGTGGATTGGAACTTACTCGACAAGGAATTTCGCTGCCTTAGGACCGTT 535026
Query 173 A 173
|
Sbjct 535027 A 535027
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546774239583
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |