Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq80317 226 6e-57 seq80316 203 7e-50 seq13452 136 8e-30 seq224 118 2e-24 seq396 107 4e-21 seq2630 95.1 3e-17 seq532 84.2 5e-14 seq152 84.2 5e-14 seq98 77.0 7e-12 seq56 77.0 7e-12 >seq80317 Length=158462 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 103927 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 103869 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 103868 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 103809 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 103808 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 103749 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 103748 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 103703 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 103702 CAACCGTTTCCAGTTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 103645 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 103644 GTCCGCCACT 103635 Score = 226 bits (250), Expect = 6e-57 Identities = 240/310 (77%), Gaps = 20/310 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 140734 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 140792 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 140793 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 140852 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 140853 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 140912 Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| |||| | | | | | || | |||||||| Sbjct 140913 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCTCAG-CCTACGGGGTATTAG 140958 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 140959 CAACCGTTTCCAGTTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 141016 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 141017 GTCCGCCACT 141026 >seq80316 Length=715001 Score = 203 bits (224), Expect = 7e-50 Identities = 179/220 (81%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 682171 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 682114 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 682113 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 682054 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 682053 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 681994 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||| | ||||| | || ||||||||| | ||||| Sbjct 681993 GACCAACGACCTAATACTACGCAGGCTCATCAAACAGCGC 681954 >seq13452 Length=1971 Score = 136 bits (150), Expect = 8e-30 Identities = 104/122 (85%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| |||||||| || |||||||||||||||||| || || || ||||||||||| Sbjct 450 CACACGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCAGAAAATATCCTACTGCTGCCTC 392 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||| | Sbjct 391 CCGTAGGAGTCTGAGCCGTGTCTTAGTTCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 332 Query 149 AC 150 || Sbjct 331 AC 330 >seq224 Length=478311 Score = 118 bits (130), Expect = 2e-24 Identities = 97/117 (83%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 34 GGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTA 93 ||||||| || |||||||||||||||||| || ||| || ||||||||||| |||| Sbjct 411133 GGCATTG-CTCCGTCAGGCTTTCGCCCATTGCAGAAAATTTCCTACTGCTGCCTCTCGTA 411075 Query 94 GGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTAC 150 ||||||| | || ||||||||| ||| |||| ||||||||||||| ||||||||| Sbjct 411074 GGAGTCTAGGCCATGTCTCAGTCCCAATGTGGCTGATCATCCTCTAGAACCAGTTAC 411018 >seq396 Length=275193 Score = 107 bits (118), Expect = 4e-21 Identities = 132/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 15 GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTC 74 |||||||| || | || || ||||| | |||| ||| |||||| | || ||| Sbjct 165398 GACCTTCTATCTC-CATGCTACATTGT-TCCATCAAATTTTAACCCATTATGAAAAATTT 165455 Query 75 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATC 134 | | ||||||||||| ||||||||| | ||||||||| | | || | |||||||| Sbjct 165456 CTTATTGCTGCCTCCCTTAGGAGTCTTGGTCGTGTCTCAATCCTGATGCAATTGATCATC 165515 Query 135 CTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAA 192 |||||| || || ||| |||| | |||||||| || |||||||||| || ||||||| Sbjct 165516 CTCTCAAACTAGCTACTGATCATTGCCTTGGTAAGTTATTACCTCACTAATTAGCTAA 165573 >seq2630 Length=17387 Score = 95.1 bits (104), Expect = 3e-17 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 17285 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 17227 Query 89 CCGTAGGAGTCTGG 102 |||||||||||||| Sbjct 17226 CCGTAGGAGTCTGG 17213 >seq532 Length=194115 Score = 84.2 bits (92), Expect = 5e-14 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 115 TTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT 174 ||| |||||| ||||||||||||| |||||| ||| |||| |||| ||||| ||| ||| Sbjct 11006 TTCTAGTGTGGCTGATCATCCTCTTAGACCAACTACTGATCATCGCTTTGGTAAGCTATT 11065 Query 175 ACCTCACCAACTAGCTAAT 193 | |||||||||| ||||| Sbjct 11066 GCATCACCAACTAACTAAT 11084 >seq152 Length=670426 Score = 84.2 bits (92), Expect = 5e-14 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 115 TTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT 174 ||| |||||| ||||||||||||| |||||| ||| |||| |||| ||||| ||| ||| Sbjct 350972 TTCTAGTGTGGCTGATCATCCTCTTAGACCAACTACTGATCATCGCTTTGGTAAGCTATT 350913 Query 175 ACCTCACCAACTAGCTAAT 193 | |||||||||| ||||| Sbjct 350912 GCATCACCAACTAACTAAT 350894 >seq98 Length=906752 Score = 77.0 bits (84), Expect = 7e-12 Identities = 109/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 23 TTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGC 82 ||||| || ||| |||| || || |||||| ||||||||||||| ||| |||| | Sbjct 422643 TTCACTCATGCGATATTGTTTG-ATTGGGCTTTTGCCCATTGTCCAAGATTTACCACCAC 422585 Query 83 TGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGA 142 |||| | || |||||| | || | ||| ||| |||||||| |||||||| ||| Sbjct 422584 TGCCCCTAGTGGGAGTCCAGGCCTTATCTTAGTCCCAGTGTGGCTGATCATTTGAAAAGA 422525 Query 143 CCAGTTACGGATCGTCGCCTTGGTGAGCCATT 174 | || || ||||| || | |||| ||| || Sbjct 422524 CTAGCTAAGGATCACCGGCGTGGTTGGCCTTT 422493 >seq56 Length=1232033 Score = 77.0 bits (84), Expect = 7e-12 Identities = 68/84 (81%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 30 ACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCC 89 |||| |||||| || ||||||||| |||||||| || |||||| ||||||| ||| Sbjct 779912 ACGCAGCATTG-CTCTGTCAGGCTTTTGCCCATTGCAGAACATTCCCGGCTGCTGCATCC 779854 Query 90 CGTAGGAGTCTGGACCGTGTCTCA 113 | ||||||||||| | |||||||| Sbjct 779853 CATAGGAGTCTGGGCAGTGTCTCA 779830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071139001760