Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq262 91.5 2e-16 seq43 91.5 2e-16 >seq262 Length=430302 Score = 91.5 bits (100), Expect = 2e-16 Identities = 86/107 (80%), Gaps = 7/107 (7%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAATGTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| || |||||| ||| Sbjct 152617 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCATACAGTATTCAGGC 152559 Query 69 GTAA-----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | || ||||||||||| ||||||||||| |||| ||||| || Sbjct 152558 GAAATTTTAGCCTGCTTTGAGCACTCTAATTTGTTCAAAGTAAACGT 152512 >seq43 Length=1471821 Score = 91.5 bits (100), Expect = 2e-16 Identities = 86/107 (80%), Gaps = 7/107 (7%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAATGTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| || |||||| ||| Sbjct 1025584 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCATACAGTATTCAGGC 1025526 Query 69 GTAA-----GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | || ||||||||||| ||||||||||| |||| ||||| || Sbjct 1025525 GAAATTTTAGCCTGCTTTGAGCACTCTAATTTGTTCAAAGTAAACGT 1025479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594736892178