Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq80317 217 3e-54 seq80316 163 7e-38 seq7926 163 7e-38 seq62 140 8e-31 seq56852 107 5e-21 seq216 107 5e-21 seq6955 104 5e-20 seq6582 104 5e-20 seq6492 104 5e-20 seq6491 104 5e-20 seq2 87.8 4e-15 seq1454 80.6 6e-13 >seq80317 Length=158462 Score = 217 bits (240), Expect = 3e-54 Identities = 300/409 (73%), Gaps = 18/409 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 108859 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 108800 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 108799 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 108740 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || ||||| || | | ||| ||||| || || | | Sbjct 108739 ACATTCTCGCTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTC-CCTCTAAGGC 108684 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 108683 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 108628 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 108627 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 108569 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 108568 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 108509 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 108508 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 108460 Score = 217 bits (240), Expect = 3e-54 Identities = 300/409 (73%), Gaps = 18/409 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 135802 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 135861 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 135862 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 135921 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || ||||| || | | ||| ||||| || || | | Sbjct 135922 ACATTCTCGCTTCCGCTTCG--TCCAC-ACCTGCTTGCGCGGGTGCTTC-CCTCTAAGGC 135977 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 135978 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 136033 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 136034 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 136092 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || |||||| ||||| Sbjct 136093 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTG 136152 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || |||||||||||||||| ||||| ||||||||||||||||| Sbjct 136153 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTTCCCTCTCG 136201 >seq80316 Length=715001 Score = 163 bits (180), Expect = 7e-38 Identities = 152/192 (79%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | ||||| |||| || ||| || ||||||| Sbjct 218036 GCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAG---CTAGACCAGT 217980 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 217979 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 217920 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 217919 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 217860 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 217859 GTTTCCCTCTCG 217848 >seq7926 Length=3269 Score = 163 bits (180), Expect = 7e-38 Identities = 152/192 (79%), Gaps = 6/192 (3%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | ||||| |||| || ||| || ||||||| Sbjct 1317 GCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAG---CTAGACCAGT 1261 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| ||||||||||||||||||||| |||||||||||||| || Sbjct 1260 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCG 1201 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||||||| ||||||| | |||||||||| Sbjct 1200 CTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTTAGCGTACGATCTGGGCT 1141 Query 389 GTTTCCCTCTCG 400 |||||||||||| Sbjct 1140 GTTTCCCTCTCG 1129 >seq62 Length=1185878 Score = 140 bits (154), Expect = 8e-31 Identities = 110/132 (83%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTG 318 || || |||||||||||||||||||||||||||| |||||||||| | || ||||||||| Sbjct 1178239 CTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAGGCAAACCTCCTG 1178298 Query 319 GTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGAT 378 | ||||| ||| | | || |||||| ||||||| || |||||||||||||||| | Sbjct 1178299 GCTGTCTTTGCACCCCTACCTCCTTTATCACTGAGCGGTCATTTAGGGGCCTTAGCTGGT 1178358 Query 379 GATCTGGGCTGT 390 |||| ||||||| Sbjct 1178359 GATCCGGGCTGT 1178370 >seq56852 Length=663 Score = 107 bits (118), Expect = 5e-21 Identities = 89/109 (82%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 245 TCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCC 304 ||||||| | | || || |||||||||||||||||||||||||||| |||||||||| Sbjct 660 TCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCT 601 Query 305 AAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 | || |||||||||| ||||| ||| | | || |||||| ||||||| Sbjct 600 AGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTTATCACTGAG 552 >seq216 Length=489955 Score = 107 bits (118), Expect = 5e-21 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || ||| |||||| | |||| |||| || |||| || ||| || Sbjct 259360 GCTTCGGTGAATCACTCAAGCCCTGAGGCATTTTCGGTGCCATGGAA---CTAGACTAGG 259416 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACG 328 |||||||||||| |||| |||||||| |||| ||||| ||||| |||||||| || Sbjct 259417 GAGCTATTACGCTTTCTTCAAAGGATGGTCGCTTTTAAGCCCACCTCTTGGTTGTCATCG 259476 Query 329 CAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCT 388 | ||| |||||| ||||| ||| | ||| ||| ||||||| | ||| ||| | Sbjct 259477 CTCAATCACTTCCTTTTCCACTAAGTGATTGCTTGGGGACCTTAGCGCACGATTTGGATT 259536 Query 389 GTTTCCCTCTC 399 ||||| ||||| Sbjct 259537 GTTTCTCTCTC 259547 >seq6955 Length=3858 Score = 104 bits (114), Expect = 5e-20 Identities = 92/114 (81%), Gaps = 6/114 (5%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | ||||| |||| || ||| || ||||||| Sbjct 3747 GCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAG---CTAGACCAGT 3803 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTG 322 |||||||||||| |||| ||||||||||||||||||||| |||||||||||| Sbjct 3804 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTG 3857 >seq6582 Length=4169 Score = 104 bits (114), Expect = 5e-20 Identities = 92/114 (81%), Gaps = 6/114 (5%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | ||||| |||| || ||| || ||||||| Sbjct 3413 GCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAG---CTAGACCAGT 3469 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTG 322 |||||||||||| |||| ||||||||||||||||||||| |||||||||||| Sbjct 3470 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTG 3523 >seq6492 Length=4246 Score = 104 bits (114), Expect = 5e-20 Identities = 92/114 (81%), Gaps = 6/114 (5%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | ||||| |||| || ||| || ||||||| Sbjct 834 GCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAG---CTAGACCAGT 778 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTG 322 |||||||||||| |||| ||||||||||||||||||||| |||||||||||| Sbjct 777 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTG 724 >seq6491 Length=4246 Score = 104 bits (114), Expect = 5e-20 Identities = 92/114 (81%), Gaps = 6/114 (5%) Strand=Plus/Plus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGC---GGAATCACTTGACCAGT 268 ||||||| | || |||| ||||| | ||||| |||| || ||| || ||||||| Sbjct 3413 GCTTCGGTGAATCACTTGAGCCCTGAGACATTTTCGGTGCCATGGAG---CTAGACCAGT 3469 Query 269 GAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTG 322 |||||||||||| |||| ||||||||||||||||||||| |||||||||||| Sbjct 3470 GAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTG 3523 >seq2 Length=3709472 Score = 87.8 bits (96), Expect = 4e-15 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 |||||| |||| ||| |||| ||| || | ||| ||| || || | || | || Sbjct 1697860 CCACAGGTTCGATAGATCGCTTA-GCCTCGTT-CATCTTCGATGCAAAAGCGCTCAATCA 1697803 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 ||||||||||||||||||||| ||| ||||| |||| | | ||||| |||| | ||| Sbjct 1697802 ATGAGCTATTACGCACTCTTTCGAGGGTGGCTACTTCTAGGAAAACCTTCTGGCTATCTC 1697743 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTG 376 || ||| || |||||| ||||||| || ||||| ||||||| || Sbjct 1697742 TGCCCCTCTACCTCCTTTATCACTGAGCGGTCATTTAGGAGCCTTAGATG 1697693 >seq1454 Length=44649 Score = 80.6 bits (88), Expect = 6e-13 Identities = 71/89 (80%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 312 CCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTT 371 ||||||||||||| ||| ||| |||||| ||||| ||| | ||||||| |||| Sbjct 42694 CCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAGGGACCTT 42635 Query 372 AGCTGATGATCTGGGCTGTTTCCCTCTCG 400 ||| | |||||||||||||||||||||| Sbjct 42634 AGCGTACGATCTGGGCTGTTTCCCTCTCG 42606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176654187008