Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq80317 87.8 1e-15
seq21288 87.8 1e-15
seq380 87.8 1e-15
seq144 71.6 1e-10
>seq80317
Length=158462
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 109918 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 109859
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 109858 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 109801
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 134743 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 134802
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 134803 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 134860
>seq21288
Length=1381
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 254 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 195
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| ||||||| | || ||| ||| |||||| | ||| |||| |||||||
Sbjct 194 CTTTCGTCTCTGCTCGACGGGTGAGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 137
>seq380
Length=291704
Score = 87.8 bits (96), Expect = 1e-15
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||||||||||||||| |||||||||| || || |||||||||| | ||
Sbjct 279195 TAACTTTTATCCGTTGAGCGACGGCCCTTCCACTCGGCACCGTCGGATCACTAAGGCCGA 279136
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||||| |||||| | || | ||| ||| |||||| | ||| |||| |||||||
Sbjct 279135 CTTTCGTCCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTGCCTTTGCACT 279078
>seq144
Length=696361
Score = 71.6 bits (78), Expect = 1e-10
Identities = 89/120 (74%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| ||||||||||||||| || | |||||||| ||| ||| |||||||||| | |
Sbjct 695507 TAACTTTTATCCGTTGAGTGACGACCCTTCCACTCAACGCCGTCGGATCACTAAGGCTGA 695448
Query 61 CTTTCGCATC--TGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
|||| |||| ||||| | || | ||| ||| | |||| | |||||||| |||| ||
Sbjct 695447 CTTT--CATCCTTGCTCGACGGGTGGGTCTTGCAGTTAAGCTCCCTTTTGCCTTTGCCCT 695390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351734953900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |