Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq32930 134 1e-29 seq20699 113 5e-23 seq19983 113 5e-23 seq4433 113 5e-23 seq262 113 5e-23 seq43 113 5e-23 seq314 107 2e-21 seq621 98.7 1e-18 >seq32930 Length=1000 Score = 134 bits (148), Expect = 1e-29 Identities = 139/178 (78%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| ||||| Sbjct 90 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 149 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | |||||| | |||| ||||| ||| || | ||| || |||||||| | Sbjct 150 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 207 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 ||| ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 208 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 265 >seq20699 Length=1409 Score = 113 bits (124), Expect = 5e-23 Identities = 134/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||| Sbjct 182 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 241 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| ||||| ||| || | ||| || |||||||| | Sbjct 242 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 299 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| || |||||| | ||||| || |||| ||||| ||||||||||||||| Sbjct 300 AGAGGGACAGCCGGGGGCATTCGTATTTCATAGTCAGAGGTGTAATTCTTGGATTTAT 357 >seq19983 Length=1447 Score = 113 bits (124), Expect = 5e-23 Identities = 134/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||| Sbjct 1193 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 1252 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| ||||| ||| || | ||| || |||||||| | Sbjct 1253 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1310 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| || |||||| | ||||| || |||| ||||| ||||||||||||||| Sbjct 1311 AGAGGGACAGCCGGGGGCATTCGTATTTCATAGTCAGAGGTGTAATTCTTGGATTTAT 1368 >seq4433 Length=7594 Score = 113 bits (124), Expect = 5e-23 Identities = 134/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||| Sbjct 182 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 241 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| ||||| ||| || | ||| || |||||||| | Sbjct 242 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 299 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| || |||||| | ||||| || |||| ||||| ||||||||||||||| Sbjct 300 AGAGGGACAGCCGGGGGCATTCGTATTTCATAGTCAGAGGTGTAATTCTTGGATTTAT 357 >seq262 Length=430302 Score = 113 bits (124), Expect = 5e-23 Identities = 139/185 (75%), Gaps = 10/185 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATACATT 64 || ||||||||||| ||||||||| | ||||||||||| || || |||||| | Sbjct 152512 ACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGCTAAAATTTCGCCTGAATACTGT 152571 Query 65 A-CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 | ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 152572 ATGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 152629 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| | | | ||||| | ||||| || | |||||||||||| Sbjct 152630 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 152689 Query 182 TGGAT 186 ||||| Sbjct 152690 TGGAT 152694 >seq43 Length=1471821 Score = 113 bits (124), Expect = 5e-23 Identities = 139/185 (75%), Gaps = 10/185 (5%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATACATT 64 || ||||||||||| ||||||||| | ||||||||||| || || |||||| | Sbjct 1025479 ACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGCTAAAATTTCGCCTGAATACTGT 1025538 Query 65 A-CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121 | ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | || Sbjct 1025539 ATGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 1025596 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| | | | ||||| | ||||| || | |||||||||||| Sbjct 1025597 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 1025656 Query 182 TGGAT 186 ||||| Sbjct 1025657 TGGAT 1025661 >seq314 Length=348116 Score = 107 bits (118), Expect = 2e-21 Identities = 133/178 (75%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| |||| | |||||||| ||||| Sbjct 118320 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 118379 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| ||||| ||| || | | | || |||||||| | Sbjct 118380 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGAATCGGA-GTAATGATTA 118437 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | ||| || |||||| | ||||| || || | ||||||||||||||||||||| Sbjct 118438 AGAGGGACAGCCGGGGGCATTCGTATTTTATAGTTAGAGGTGAAATTCTTGGATTTAT 118495 >seq621 Length=157973 Score = 98.7 bits (108), Expect = 1e-18 Identities = 131/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| || | | |||||||| ||||| Sbjct 86235 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCACTGGATACATTAGCATGGG 86176 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | | |||| | |||| ||||| ||| | | |||| || |||||||| | Sbjct 86175 ATAACATCACAGGATTT-CGGTCCTATTGTGTTCGCCTTCAGGATCGGA-GTAATGATTA 86118 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | ||| || |||||| | |||| || |||| ||||||||||||| ||||||| Sbjct 86117 AGCAGGACAGCCGGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTAGATTTAT 86060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511601627680