Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq32930 134 1e-29
seq20699 113 5e-23
seq19983 113 5e-23
seq4433 113 5e-23
seq262 113 5e-23
seq43 113 5e-23
seq314 107 2e-21
seq621 98.7 1e-18
>seq32930
Length=1000
Score = 134 bits (148), Expect = 1e-29
Identities = 139/178 (78%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| |||||
Sbjct 90 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 149
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | |||||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 150 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 207
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
||| ||| ||||||||| | ||||| || |||| |||||||||||||||||||||
Sbjct 208 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 265
>seq20699
Length=1409
Score = 113 bits (124), Expect = 5e-23
Identities = 134/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||
Sbjct 182 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 241
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 242 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 299
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| || |||||| | ||||| || |||| ||||| |||||||||||||||
Sbjct 300 AGAGGGACAGCCGGGGGCATTCGTATTTCATAGTCAGAGGTGTAATTCTTGGATTTAT 357
>seq19983
Length=1447
Score = 113 bits (124), Expect = 5e-23
Identities = 134/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||
Sbjct 1193 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 1252
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 1253 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 1310
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| || |||||| | ||||| || |||| ||||| |||||||||||||||
Sbjct 1311 AGAGGGACAGCCGGGGGCATTCGTATTTCATAGTCAGAGGTGTAATTCTTGGATTTAT 1368
>seq4433
Length=7594
Score = 113 bits (124), Expect = 5e-23
Identities = 134/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||
Sbjct 182 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 241
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| ||||| ||| || | ||| || |||||||| |
Sbjct 242 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 299
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| || |||||| | ||||| || |||| ||||| |||||||||||||||
Sbjct 300 AGAGGGACAGCCGGGGGCATTCGTATTTCATAGTCAGAGGTGTAATTCTTGGATTTAT 357
>seq262
Length=430302
Score = 113 bits (124), Expect = 5e-23
Identities = 139/185 (75%), Gaps = 10/185 (5%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATACATT 64
|| ||||||||||| ||||||||| | ||||||||||| || || |||||| |
Sbjct 152512 ACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGCTAAAATTTCGCCTGAATACTGT 152571
Query 65 A-CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121
| ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | ||
Sbjct 152572 ATGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 152629
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
|||||||| |||| | | | ||||| | ||||| || | ||||||||||||
Sbjct 152630 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 152689
Query 182 TGGAT 186
|||||
Sbjct 152690 TGGAT 152694
>seq43
Length=1471821
Score = 113 bits (124), Expect = 5e-23
Identities = 139/185 (75%), Gaps = 10/185 (5%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-----CTTTGCTCGAATACATT 64
|| ||||||||||| ||||||||| | ||||||||||| || || |||||| |
Sbjct 1025479 ACGTTTACTTTGAACAAATTAGAGTGCTCAAAGCAGGCTAAAATTTCGCCTGAATACTGT 1025538
Query 65 A-CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC-- 121
| ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| | ||
Sbjct 1025539 ATGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAACCCCGA 1025596
Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181
|||||||| |||| | | | ||||| | ||||| || | ||||||||||||
Sbjct 1025597 GGTAATGATTAATAGGAACGGATGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 1025656
Query 182 TGGAT 186
|||||
Sbjct 1025657 TGGAT 1025661
>seq314
Length=348116
Score = 107 bits (118), Expect = 2e-21
Identities = 133/178 (75%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| |||| | |||||||| |||||
Sbjct 118320 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCTCTGGATACATTAGCATGGG 118379
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| ||||| ||| || | | | || |||||||| |
Sbjct 118380 ATAACATCACAGGATTT-CGGTCCTATTGTGTTGGCCTTCGGAATCGGA-GTAATGATTA 118437
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| | ||| || |||||| | ||||| || || | |||||||||||||||||||||
Sbjct 118438 AGAGGGACAGCCGGGGGCATTCGTATTTTATAGTTAGAGGTGAAATTCTTGGATTTAT 118495
>seq621
Length=157973
Score = 98.7 bits (108), Expect = 1e-18
Identities = 131/178 (74%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72
|||||||||| ||||||||| | |||||||| ||| || | | |||||||| |||||
Sbjct 86235 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCACGCACTGGATACATTAGCATGGG 86176
Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132
|||| | | |||| | |||| ||||| ||| | | |||| || |||||||| |
Sbjct 86175 ATAACATCACAGGATTT-CGGTCCTATTGTGTTCGCCTTCAGGATCGGA-GTAATGATTA 86118
Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190
| ||| || |||||| | |||| || |||| ||||||||||||| |||||||
Sbjct 86117 AGCAGGACAGCCGGGGGCATTCATATTTCATAGTCAGAGGTGAAATTCTTAGATTTAT 86060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511601627680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |