Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq80317 275 2e-71 seq80316 165 2e-38 seq13452 147 5e-33 seq224 129 1e-27 seq2630 116 9e-24 seq396 82.4 2e-13 seq2 78.8 2e-12 seq56 73.4 1e-10 >seq80317 Length=158462 Score = 275 bits (304), Expect = 2e-71 Identities = 308/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 103953 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 103894 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 103893 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 103834 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 103833 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 103774 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 103773 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 103725 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||||| ||| | ||||||| |||| Sbjct 103724 TCCTCAGCC--TACGGGGTATTAGCAACCGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCA 103667 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 103666 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 103621 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 103620 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 103574 Score = 275 bits (304), Expect = 2e-71 Identities = 308/410 (75%), Gaps = 30/410 (7%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 140708 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 140767 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 140768 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 140827 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||||| |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||| Sbjct 140828 GGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCA 140887 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGG 244 ||||||||||| | | | | ||| || | || ||| ||| |||| Sbjct 140888 ACTAGCTAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGC 140936 Query 245 TCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCA 304 || | | | || | ||||||||| |||||||||||| ||| | ||||||| |||| Sbjct 140937 TCCTCAGCC--TACGGGGTATTAGCAACCGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCA 140994 Query 305 GTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTG 364 | ||| | | |||||||||||||||||||| ||| || || |||| Sbjct 140995 GGTTCTTACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC--- 141040 Query 365 TTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||| |||||||||||||||| || ||||||||||||||| ||||| Sbjct 141041 ---CCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 141087 >seq80316 Length=715001 Score = 165 bits (182), Expect = 2e-38 Identities = 153/193 (79%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 4 CTTTACAACCCGAA--GGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCC 61 |||||||| | | | | ||||||||| |||||| || |||| ||| ||||| ||||| Sbjct 682171 CTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCC 682112 Query 62 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 121 ||||| ||| |||||||||||||||| ||||| |||||| || |||||||||||| |||| Sbjct 682111 ATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAG 682052 Query 122 TGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCG 181 |||||||| |||||| |||||||||| | ||| | | || ||| ||| ||||| Sbjct 682051 TGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGA 681992 Query 182 CCAACTAGCTAAT 194 ||||| | ||||| Sbjct 681991 CCAACGACCTAAT 681979 Score = 78.8 bits (86), Expect = 2e-12 Identities = 108/152 (71%), Gaps = 17/152 (11%) Strand=Plus/Plus Query 263 TATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCCCAGACATTACTC 322 |||||| |||||||||||| ||| | ||||||| ||||| ||| | | |||||| Sbjct 149220 TATTAGAAACCGTTTCCAGTTGTTGTTCCCCTCCCAAGGGCAGGTTCTTACGCGTTACTC 149279 Query 323 ACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCGTTCGACTTGCAT 382 |||||||||||||| ||| || || |||| |||| |||||||||| Sbjct 149280 ACCCGTCCGCCACT------GGAAACACCA-----CTTC------CCGTCCGACTTGCAT 149322 Query 383 GTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 |||||| || | || ||||||| |||||| Sbjct 149323 GTGTTAAGCATATAGCTAGCGTTCCTTCTGAG 149354 >seq13452 Length=1971 Score = 147 bits (162), Expect = 5e-33 Identities = 120/146 (82%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| || ||| | | | ||| |||||| ||| | |||||||| |||||||| Sbjct 476 TTCACGACCCGTGGGTCTTGTACCTCCACACGGCATTGCTCCGTCAGGCTTTCGCCCATT 417 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | || || || |||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 416 GCAGAAAATATCCTACTGCTGCCTCCCGTAGGAGTCTGAGCCGTGTCTTAGTTCCAGTGT 357 Query 125 GGCTGGTCATCCTCTCAGACCAGCTA 150 ||||| |||||||||| ||||||||| Sbjct 356 GGCTGATCATCCTCTCGGACCAGCTA 331 >seq224 Length=478311 Score = 129 bits (142), Expect = 1e-27 Identities = 116/146 (79%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | ||| ||||| ||| | |||||||| |||||||| Sbjct 411164 TTCACGACCCGTGGGCCTTCTACCTCCACATGGCATTGCTCCGTCAGGCTTTCGCCCATT 411105 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | || ||| || ||||||||||| ||||||||||| | || ||||||||| ||| ||| Sbjct 411104 GCAGAAAATTTCCTACTGCTGCCTCTCGTAGGAGTCTAGGCCATGTCTCAGTCCCAATGT 411045 Query 125 GGCTGGTCATCCTCTCAGACCAGCTA 150 ||||| ||||||||| ||||| || Sbjct 411044 GGCTGATCATCCTCTAGAACCAGTTA 411019 >seq2630 Length=17387 Score = 116 bits (128), Expect = 9e-24 Identities = 85/99 (86%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || || ||||| |||||||| | | |||||||||| ||| | |||||||| |||||||| Sbjct 17311 TTCACGACCCGTGGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATT 17252 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 103 | | || |||||||||||||||||||||||||||||||| Sbjct 17251 GCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGG 17213 >seq396 Length=275193 Score = 82.4 bits (90), Expect = 2e-13 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 59 CCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 118 |||||| || || ||| | | ||||||||||| ||||||||| | ||||||||| | | Sbjct 165439 CCCATTATGAAAAATTTCTTATTGCTGCCTCCCTTAGGAGTCTTGGTCGTGTCTCAATCC 165498 Query 119 CAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACC 178 || || ||||||||||| || ||||| |||| | |||| ||| | |||||| Sbjct 165499 TGATGCAATTGATCATCCTCTCAAACTAGCTACTGATCATTGCCTTGGTAAGTTATTACC 165558 Query 179 CCGCCAACTAGCTAA 193 | | || ||||||| Sbjct 165559 TCACTAATTAGCTAA 165573 >seq2 Length=3709472 Score = 78.8 bits (86), Expect = 2e-12 Identities = 66/81 (81%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 || |||||||| ||| ||||| | | || || |||| ||| |||||||||| | |||||| Sbjct 3423628 TTCACAACCCGCAGGTCTTCTACCTTCATGCAGCATTGCTCCATCAGGCTTTCACCCATT 3423687 Query 65 GTGCAATATTCCCCACTGCTG 85 | | || |||||||||||||| Sbjct 3423688 GCGGAAAATTCCCCACTGCTG 3423708 >seq56 Length=1232033 Score = 73.4 bits (80), Expect = 1e-10 Identities = 66/83 (80%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 32 ACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCC 91 |||| |||| ||| |||||||| |||||||| || |||||| ||||||| |||| Sbjct 779912 ACGCAGCATTGCTCTGTCAGGCTTTTGCCCATTGCAGAACATTCCCGGCTGCTGCATCCC 779853 Query 92 GTAGGAGTCTGGACCGTGTCTCA 114 ||||||||||| | |||||||| Sbjct 779852 ATAGGAGTCTGGGCAGTGTCTCA 779830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1221418204992