Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq80317 329 1e-87 seq80316 266 1e-68 seq2630 158 4e-36 seq2958 149 2e-33 seq224 120 9e-25 seq13452 118 3e-24 seq396 89.7 2e-15 seq56 78.8 3e-12 >seq80317 Length=158462 Score = 329 bits (364), Expect = 1e-87 Identities = 280/343 (82%), Gaps = 3/343 (1%) Strand=Plus/Plus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 103756 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 103815 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 103816 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 103875 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 103876 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 103935 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 ||||| |||||||| || ||| | ||| ||||| |||||||||| |||||| Sbjct 103936 AGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAAT 103995 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 103996 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 104055 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || | ||||| Sbjct 104056 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC 104097 Score = 329 bits (364), Expect = 1e-87 Identities = 280/343 (82%), Gaps = 3/343 (1%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||||||||||||||||||||| ||| || |||||||||||||| |||||||||| | Sbjct 140905 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 140846 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 | |||||| ||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 140845 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 140786 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | || Sbjct 140785 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 140726 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397 ||||| |||||||| || ||| | ||| ||||| |||||||||| |||||| Sbjct 140725 AGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAAT 140666 Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||||| Sbjct 140665 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 140606 Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||| | | |||||||||| || |||||||| || | ||||| Sbjct 140605 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC 140564 >seq80316 Length=715001 Score = 266 bits (294), Expect = 1e-68 Identities = 257/327 (79%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| | |||||| |||||| |||| |||||| | | ||| |||| | || || Sbjct 681979 ATTAGGTCGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGG 682038 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 ||||| |||||| ||| |||||||||||| || ||||| ||||| ||||||||||||| Sbjct 682039 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 682098 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345 ||| ||| ||||||||| |||||| ||| |||||| |||||||| || ||||| | | Sbjct 682099 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAAT 682158 Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403 | | | |||||||||| || || | | ||| ||||| | ||| ||||| ||||||| Sbjct 682159 GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCC 682218 Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463 ||||||||| |||||||||||||||||||| ||| |||||| || ||| | |||||| | Sbjct 682219 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGA 682278 Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490 || |||||||||||| |||||| ||| Sbjct 682279 CT-GGGCGTAAAGGGCACGTAGGCGGT 682304 >seq2630 Length=17387 Score = 158 bits (174), Expect = 4e-36 Identities = 140/174 (80%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318 ||| |||||||||||||||||||||||||||| || | |||||||| ||||||||| | | Sbjct 17213 CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGA 17272 Query 319 GCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-- 376 |||| |||||||| | ||||||| |||||||| || ||| | ||| ||||| Sbjct 17273 GCAATGCCGCGTGGAGGTAGAAGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAG 17332 Query 377 TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGG 430 |||||||||| |||||| |||| ||||||||| |||||||||||||||| Sbjct 17333 CAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGG 17386 >seq2958 Length=14584 Score = 149 bits (164), Expect = 2e-33 Identities = 145/186 (78%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337 || |||||||||| || | |||||||| ||||||||| | ||||| |||||||| | Sbjct 11395 AGAAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTA 11336 Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGAT--AATGACGGTACTTGAGGA 395 ||||||| |||||||| || ||| | ||| ||||| ||||||| || |||||| Sbjct 11335 GAAGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGATATCTGAGGA 11276 Query 396 GGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATC 455 |||| ||||||||| ||||||||||||||||||| || ||| || ||||||||| Sbjct 11275 AAAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATC 11216 Query 456 CGGAAT 461 |||||| Sbjct 11215 CGGAAT 11210 >seq224 Length=478311 Score = 120 bits (132), Expect = 9e-25 Identities = 114/146 (78%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282 ||||| ||||| |||||||||| ||||||||| || | | ||||||||| |||||||||| Sbjct 411030 AGAGGATGATCAGCCACATTGGGACTGAGACATGGCCTAGACTCCTACGAGAGGCAGCAG 411089 Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342 | || ||| || |||||||| ||||||||| | ||||| ||| ||| | ||||| Sbjct 411090 TAGGAAATTTTCTGCAATGGGCGAAAGCCTGACGGAGCAATGCCATGTGGAGGTAGAAGG 411149 Query 343 CCTTCGGGTCGTAAAGCTCTGTCCTC 368 || |||||||| || ||| | ||| Sbjct 411150 CCCACGGGTCGTGAACTTCTTTTCTC 411175 >seq13452 Length=1971 Score = 118 bits (130), Expect = 3e-24 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269 |||||| | | |||||| ||||| |||||| ||||||| |||||||| || ||||||| Sbjct 329 AGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGAACTAAGACACGGCTCAGACTCCTA 388 Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329 |||||||||||||| || || || |||||||| ||||||||| | ||||| |||| | Sbjct 389 CGGGAGGCAGCAGTAGGATATTTTCTGCAATGGGCGAAAGCCTGACGGAGCAATGCCGTG 448 Query 330 TGAGCGATGAAGGCCTTCGGGTCGTAAA 357 || | ||| || |||||||| || Sbjct 449 TGGAGGTACAAGACCCACGGGTCGTGAA 476 >seq396 Length=275193 Score = 89.7 bits (98), Expect = 2e-15 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 || ||| ||||||| || || |||||| ||||||||||| | |||||||||| Sbjct 165581 GCATCTACTTAGCTAATTAGTGAGGTAATAACTTACCAAGGCAATGATCAGTAGCTAGTT 165522 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 ||||||| ||||| ||| | | ||||||||| | | ||||||| |||||||||| Sbjct 165521 TGAGAGGATGATCAATTGCATCAGGATTGAGACACGACCAAGACTCCTAAGGGAGGCAGC 165462 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322 | | | ||| || || |||||| ||| ||||| | ||| Sbjct 165461 AATAAGAAATTTTTCATAATGGGTTAAAATTTGATGGAACAA 165420 >seq56 Length=1232033 Score = 78.8 bits (86), Expect = 3e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 248 TGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAA 307 |||||||| | ||| ||||||| |||| ||||||| |||||| || ||||||||||| Sbjct 779830 TGAGACACTGCCCAGACTCCTATGGGATGCAGCAGCCGGGAATGTTCTGCAATGGGCAAA 779889 Query 308 AGCCTGATGCAGCAACGCCGCGT 330 ||||||| ||||| || |||| Sbjct 779890 AGCCTGACAGAGCAATGCTGCGT 779912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496397172608