Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq80317 329 1e-87
seq80316 266 1e-68
seq2630 158 4e-36
seq2958 149 2e-33
seq224 120 9e-25
seq13452 118 3e-24
seq396 89.7 2e-15
seq56 78.8 3e-12
>seq80317
Length=158462
Score = 329 bits (364), Expect = 1e-87
Identities = 280/343 (82%), Gaps = 3/343 (1%)
Strand=Plus/Plus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||||||||||||||||||||| ||| || |||||||||||||| |||||||||| |
Sbjct 103756 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 103815
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 103816 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 103875
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | ||
Sbjct 103876 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 103935
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397
||||| |||||||| || ||| | ||| ||||| |||||||||| ||||||
Sbjct 103936 AGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAAT 103995
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 103996 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 104055
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||| | | |||||||||| || |||||||| || | |||||
Sbjct 104056 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC 104097
Score = 329 bits (364), Expect = 1e-87
Identities = 280/343 (82%), Gaps = 3/343 (1%)
Strand=Plus/Minus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||||||||||||||||||||| ||| || |||||||||||||| |||||||||| |
Sbjct 140905 CGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGT 140846
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
| |||||| ||||| |||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 140845 CCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 140786
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||| || | |||||||| ||||||||| | ||||| |||||||| | ||
Sbjct 140785 CAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGA 140726
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA--TAATGACGGTACTTGAGGAGG 397
||||| |||||||| || ||| | ||| ||||| |||||||||| ||||||
Sbjct 140725 AGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGGTATCTGAGGAAT 140666
Query 398 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 457
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||||
Sbjct 140665 AAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATCCG 140606
Query 458 GAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
|||| | | |||||||||| || |||||||| || | |||||
Sbjct 140605 GAATGA-TTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTC 140564
>seq80316
Length=715001
Score = 266 bits (294), Expect = 1e-68
Identities = 257/327 (79%), Gaps = 5/327 (2%)
Strand=Plus/Plus
Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227
||||| | |||||| |||||| |||| |||||| | | ||| |||| | || ||
Sbjct 681979 ATTAGGTCGTTGGTCAGGTAAAGGCTGACCAAGCCAATGATGCTTAGCTGGTCTTTTCGG 682038
Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287
||||| |||||| ||| |||||||||||| || ||||| ||||| |||||||||||||
Sbjct 682039 ATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCCCACGGGGGGCAGCAGTGGGG 682098
Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC--T 345
||| ||| ||||||||| |||||| ||| |||||| |||||||| || ||||| | |
Sbjct 682099 AATCTTGGACAATGGGCGAAAGCCCGATCCAGCAATATCGCGTGAGTGAAGAAGGGCAAT 682158
Query 346 TCGGGTCGTAAAGCTCTGTCCTCAA--GGAAGATAATGACGGTACTTGAGGAGGAAGCCC 403
| | | |||||||||| || || | | ||| ||||| | ||| ||||| |||||||
Sbjct 682159 GCCGCTTGTAAAGCTCTTTCGTCGAGTGCGCGATCATGACAGGACTCGAGGAAGAAGCCC 682218
Query 404 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 463
||||||||| |||||||||||||||||||| ||| |||||| || ||| | |||||| |
Sbjct 682219 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTGTTCTTCGGAATGA 682278
Query 464 CTGGGGCGTAAAGGGTGCGTAGGTGGT 490
|| |||||||||||| |||||| |||
Sbjct 682279 CT-GGGCGTAAAGGGCACGTAGGCGGT 682304
>seq2630
Length=17387
Score = 158 bits (174), Expect = 4e-36
Identities = 140/174 (80%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 259 CCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCA 318
||| |||||||||||||||||||||||||||| || | |||||||| ||||||||| | |
Sbjct 17213 CCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGA 17272
Query 319 GCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-- 376
|||| |||||||| | ||||||| |||||||| || ||| | ||| |||||
Sbjct 17273 GCAATGCCGCGTGGAGGTAGAAGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAG 17332
Query 377 TAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGG 430
|||||||||| |||||| |||| ||||||||| ||||||||||||||||
Sbjct 17333 CAATGACGGTATCTGAGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGG 17386
>seq2958
Length=14584
Score = 149 bits (164), Expect = 2e-33
Identities = 145/186 (78%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 278 AGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGAT 337
|| |||||||||| || | |||||||| ||||||||| | ||||| |||||||| |
Sbjct 11395 AGAAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTA 11336
Query 338 GAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGAT--AATGACGGTACTTGAGGA 395
||||||| |||||||| || ||| | ||| ||||| ||||||| || ||||||
Sbjct 11335 GAAGGCCCACGGGTCGTGAACTTCTTTTCTCGGAGAAGAAGCAATGACGATATCTGAGGA 11276
Query 396 GGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATC 455
|||| ||||||||| ||||||||||||||||||| || ||| || |||||||||
Sbjct 11275 AAAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGAGGATGCAAGCGTTATC 11216
Query 456 CGGAAT 461
||||||
Sbjct 11215 CGGAAT 11210
>seq224
Length=478311
Score = 120 bits (132), Expect = 9e-25
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 223 AGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAG 282
||||| ||||| |||||||||| ||||||||| || | | ||||||||| ||||||||||
Sbjct 411030 AGAGGATGATCAGCCACATTGGGACTGAGACATGGCCTAGACTCCTACGAGAGGCAGCAG 411089
Query 283 TGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG 342
| || ||| || |||||||| ||||||||| | ||||| ||| ||| | |||||
Sbjct 411090 TAGGAAATTTTCTGCAATGGGCGAAAGCCTGACGGAGCAATGCCATGTGGAGGTAGAAGG 411149
Query 343 CCTTCGGGTCGTAAAGCTCTGTCCTC 368
|| |||||||| || ||| | |||
Sbjct 411150 CCCACGGGTCGTGAACTTCTTTTCTC 411175
>seq13452
Length=1971
Score = 118 bits (130), Expect = 3e-24
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 210 AGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTA 269
|||||| | | |||||| ||||| |||||| ||||||| |||||||| || |||||||
Sbjct 329 AGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGAACTAAGACACGGCTCAGACTCCTA 388
Query 270 CGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCG 329
|||||||||||||| || || || |||||||| ||||||||| | ||||| |||| |
Sbjct 389 CGGGAGGCAGCAGTAGGATATTTTCTGCAATGGGCGAAAGCCTGACGGAGCAATGCCGTG 448
Query 330 TGAGCGATGAAGGCCTTCGGGTCGTAAA 357
|| | ||| || |||||||| ||
Sbjct 449 TGGAGGTACAAGACCCACGGGTCGTGAA 476
>seq396
Length=275193
Score = 89.7 bits (98), Expect = 2e-15
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
|| ||| ||||||| || || |||||| ||||||||||| | ||||||||||
Sbjct 165581 GCATCTACTTAGCTAATTAGTGAGGTAATAACTTACCAAGGCAATGATCAGTAGCTAGTT 165522
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280
||||||| ||||| ||| | | ||||||||| | | ||||||| ||||||||||
Sbjct 165521 TGAGAGGATGATCAATTGCATCAGGATTGAGACACGACCAAGACTCCTAAGGGAGGCAGC 165462
Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAA 322
| | | ||| || || |||||| ||| ||||| | |||
Sbjct 165461 AATAAGAAATTTTTCATAATGGGTTAAAATTTGATGGAACAA 165420
>seq56
Length=1232033
Score = 78.8 bits (86), Expect = 3e-12
Identities = 67/83 (81%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 248 TGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAA 307
|||||||| | ||| ||||||| |||| ||||||| |||||| || |||||||||||
Sbjct 779830 TGAGACACTGCCCAGACTCCTATGGGATGCAGCAGCCGGGAATGTTCTGCAATGGGCAAA 779889
Query 308 AGCCTGATGCAGCAACGCCGCGT 330
||||||| ||||| || ||||
Sbjct 779890 AGCCTGACAGAGCAATGCTGCGT 779912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1496397172608
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