Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq80317 188 2e-45 seq80316 178 4e-42 seq7926 178 4e-42 seq1129 104 8e-20 seq62 98.7 3e-18 seq797 96.9 1e-17 seq6 96.9 1e-17 seq216 84.2 7e-14 seq85 84.2 7e-14 >seq80317 Length=158462 Score = 188 bits (208), Expect = 2e-45 Identities = 397/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 108108 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 108167 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 108168 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 108227 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 108228 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 108287 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 108288 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 108342 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 108343 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 108400 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | || | || | || |||||| ||||| | |||| | | | | Sbjct 108401 CCCCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 108460 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 108461 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 108518 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 108519 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 108577 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 108578 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 108636 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 108637 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 108678 Score = 188 bits (208), Expect = 2e-45 Identities = 397/583 (68%), Gaps = 38/583 (7%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGACAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATG 61 |||||| | ||||||| ||| ||| | | |||||||| | |||||||| ||||| Sbjct 136553 CGAGTCTTCATAGGGCGATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATG 136494 Query 62 GCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATT 121 ||||||||||| | ||| | || |||||||||||||| ||| |||||||| ||| Sbjct 136493 ACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATC 136434 Query 122 AGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCT 181 || ||||||| ||||| ||||||||||| || | | ||| || |||||||||||| Sbjct 136433 AGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCC 136374 Query 182 CCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC----CATC-GGGGGTAGAGCACTGTT 236 |||||| || ||| || ||| | || |||| |||||| ||||||||| Sbjct 136373 CCGAAATGCGTTGAGGCGCAGC----AGT-TGACTGGACATCTAGGGGTAAAGCACTGTT 136319 Query 237 ATGGCTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--------G 287 || ||| | | ||| ||||||| | |||||||| |||| | Sbjct 136318 TCGGTGCGGGCCGCGAGAGCG--GTACCAAATCGAGGCAAACTCTGAATACTAGATATGA 136261 Query 288 CATCAGTTTTACCGCGG-----------GAGTGAGGGCATGGGTGCTAAGGTCCGTGCCC 336 | || | || | || |||||| ||||| | |||| | | | | Sbjct 136260 CCCCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTC 136201 Query 337 GAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAA 396 |||||| || | ||||| | ||||||||||||| ||||||| ||| ||| | | || Sbjct 136200 GAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AA 136143 Query 397 CGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGA 456 || || | ||| ||||||| |||| ||| || | |||||||||| | || ||||| Sbjct 136142 GGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGA 136084 Query 457 GTGCGTAACAGCTCACTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGT 516 |||||||| |||||||| ||||| || ||| || || | |||| |||| | Sbjct 136083 GTGCGTAATAGCTCACTGATCGAGCGCTCTTGCGCCGAAGATGAACGGG-GCTAAGCGAT 136025 Query 517 CTACCGAAGCAGTGGGATCATTTATATG-ATCGGTAGGGGAGC 558 || ||||||| ||||||| | | ||| |||||||||||||| Sbjct 136024 CTGCCGAAGCTGTGGGAT-GTAAAAATGCATCGGTAGGGGAGC 135983 >seq80316 Length=715001 Score = 178 bits (196), Expect = 4e-42 Identities = 321/462 (69%), Gaps = 27/462 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 217539 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 217598 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 217599 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 217658 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 217659 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 217716 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGG----GGTCATTGCGACTTACCAAA 266 | || | | ||||||||||| |||||||| |||| || ||||||| Sbjct 217717 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTTGCCCCCATTTCGCTTTACCAAC 217776 Query 267 CCATTGCAAACTCCGAATGC------GCATCAGTTTTACCGCGGGAGTGAGGGCATGGGT 320 || | ||||||||||| | |||| || ||| || || | ||||| Sbjct 217777 CCCAGGGAAACTCCGAATACAGGCCGTCATCGTTTGTAC----AGACAGACTTCTTGGGT 217832 Query 321 GCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGAC 380 |||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 217833 GCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAAT 217892 Query 381 AGCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAG 438 || ||| || || |||| |||| || | |||| | |||| || |||||||||| Sbjct 217893 CACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAG 217948 Query 439 CAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||| || ||| |||| |||||| |||||||| ||| || Sbjct 217949 CAGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 217989 >seq7926 Length=3269 Score = 178 bits (196), Expect = 4e-42 Identities = 321/462 (69%), Gaps = 27/462 (6%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 ||||||||||| | |||||| ||||| |||| ||||| | || ||||| ||| |||| Sbjct 820 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 879 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || |||||||||| |||| | ||||| |||||||| ||||| |||||||||||||| Sbjct 880 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 939 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || ||| | ||| |||||||||| || ||||| |||||| |||| || | | || Sbjct 940 AACCAAGATCGGATATAGCTGGTTTTCCGCGAAATCTATTTCAGTAGAGCGT--ATGATG 997 Query 214 ACCAT---CGGGGGTAGAGCACTGTTATGGCTAGGG----GGTCATTGCGACTTACCAAA 266 | || | | ||||||||||| |||||||| |||| || ||||||| Sbjct 998 TCGATGGCCCGAGGTAGAGCACTCAATGGGCTAGGGTTGCCCCCATTTCGCTTTACCAAC 1057 Query 267 CCATTGCAAACTCCGAATGC------GCATCAGTTTTACCGCGGGAGTGAGGGCATGGGT 320 || | ||||||||||| | |||| || ||| || || | ||||| Sbjct 1058 CCCAGGGAAACTCCGAATACAGGCCGTCATCGTTTGTAC----AGACAGACTTCTTGGGT 1113 Query 321 GCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGAC 380 |||||| ||| ||||||| || | || || | ||||||| ||| || | Sbjct 1114 GCTAAGATCCAAAGTCGAGAGGGAAACAGCCCAGATCGTACGCTAAGGTCCCTAAGCAAT 1173 Query 381 AGCTAAGTTAAACTAACGAAGTCTGAT--TGCTAAGACAGCTAGGATGTTGGCTTGGAAG 438 || ||| || || |||| |||| || | |||| | |||| || |||||||||| Sbjct 1174 CACTTAGTGGAA--AAGGAAG--TGATCGAGCGATGACAACCAGGAGGTGGGCTTGGAAG 1229 Query 439 CAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||| || ||| |||| |||||| |||||||| ||| || Sbjct 1230 CAGCCA-TCCTTTGAAGAAAGCGTAATAGCTCACTGGTCTAG 1270 >seq1129 Length=63044 Score = 104 bits (114), Expect = 8e-20 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 48 GTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACT 107 |||||||| |||| | ||||||||| | ||| | || |||||||| ||||| ||| Sbjct 899 GTGATCTATACATGACTAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCAGAACCGACT 840 Query 108 AATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAA 167 |||||||| |||||| ||||||| ||||| ||||||||||| || | | ||| | Sbjct 839 GATGTTGAAGAATTAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCCAACCCAAAG 780 Query 168 ATAGCTGGTTCTCTCCGAAA 187 |||||||||||| || ||| Sbjct 779 CTAGCTGGTTCTCACCAAAA 760 >seq62 Length=1185878 Score = 98.7 bits (108), Expect = 3e-18 Identities = 101/130 (78%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 351 CCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGC 410 ||||| | ||||||||||||| ||||||| ||| ||| | | || || || | ||| Sbjct 1178365 CCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATA--AAGGAGGTAGGGGTGC 1178308 Query 411 TAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTC 470 |||||||| |||| ||| || | |||||||||| | || ||||||||||||| ||||| Sbjct 1178307 AAAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTC 1178249 Query 471 ACTAGTCGAG 480 ||| ||||| Sbjct 1178248 ACTGATCGAG 1178239 >seq797 Length=103583 Score = 96.9 bits (106), Expect = 1e-17 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 91 GGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAG 150 ||||| |||||||||| |||| | ||||| |||||||| ||||| |||||||||||| Sbjct 82050 GGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAG 82109 Query 151 GCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || || ||| | ||| |||||||||| || ||||| ||||| |||| || Sbjct 82110 GCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATTTATTTCAGTAGAGC 82162 Score = 91.5 bits (100), Expect = 5e-16 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 91 GGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAG 150 ||||| |||||||||| |||| | ||||| |||||||| ||||| |||||||||||| Sbjct 88575 GGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAG 88634 Query 151 GCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 | || ||| | ||| |||||||||| || ||||| ||||| |||| || Sbjct 88635 GTCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATTTATTTCAGTAGAGC 88687 >seq6 Length=2872082 Score = 96.9 bits (106), Expect = 1e-17 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 91 GGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAG 150 ||||| |||||||||| |||| | ||||| |||||||| ||||| |||||||||||| Sbjct 2464559 GGAGGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAG 2464618 Query 151 GCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC 203 || || ||| | ||| |||||||||| || ||||| ||||| |||| || Sbjct 2464619 GCCAACCAAGATCGGATATAGCTGGTTTTCCGCGAAATTTATTTCAGTAGAGC 2464671 >seq216 Length=489955 Score = 84.2 bits (92), Expect = 7e-14 Identities = 89/116 (77%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 80 TAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGT 139 ||||| || |||||| | |||||||| | || | ||||| ||||||| ||||| | Sbjct 259812 TAACAGGCTTTGGAGGACACAACCCACTTACGTGGCAAAATACAGGGATGACTTGTGGCT 259753 Query 140 AGGGG-TGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTT 194 ||||| |||||||| || ||| ||||| |||||||||| ||| | ||| || ||| Sbjct 259752 AGGGGGTGAAAGGCCAACCAAGATTGGATATAGCTGGTTTTCTGCAAAATCTGTTT 259697 >seq85 Length=992388 Score = 84.2 bits (92), Expect = 7e-14 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAG-GTGCGGTAACACGCCCTGGA 93 || || ||||||| |||||| ||||| | |||| || | || ||||| || || || Sbjct 73162 GATCCAAAACCAATCGATCTAGCCATGAGCGGGATAAATAGAGCTCTAACAAGCACTAGA 73103 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || | ||||||| |||| | | ||| |||||||| ||||| |||||||||||||| Sbjct 73102 GGACTGAACCCATGTATGTGGCATAATATGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 73043 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTT 194 | |||| | || ||| || || || | ||| |||||| Sbjct 73042 AGCCAAAATCAGATATATTTGATTTTCCACAAAATCTATTT 73002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1688242963968