Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq80317 132 1e-28 seq80316 111 3e-22 seq2630 89.7 1e-15 seq224 89.7 1e-15 seq13452 82.4 2e-13 >seq80317 Length=158462 Score = 132 bits (146), Expect = 1e-28 Identities = 196/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 104024 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 103976 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 103975 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 103923 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 103922 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 103863 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 103862 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 103803 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 103802 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 103764 Score = 132 bits (146), Expect = 1e-28 Identities = 196/279 (70%), Gaps = 18/279 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 140637 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 140685 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 140686 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 140738 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 140739 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 140798 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||| ||||| || | ||||||| || | ||| || Sbjct 140799 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGAT 140858 Query 241 CGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 | | | || ||| || || || | || |||| ||||| Sbjct 140859 CATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAAT 140897 >seq80316 Length=715001 Score = 111 bits (122), Expect = 3e-22 Identities = 144/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 ||||| || |||||| | | ||||| || | || ||| |||||| |||| ||||| || Sbjct 682153 CCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCA 682094 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 |||||||| ||||| ||||| || |||||||||||| ||| ||||| || | ||| Sbjct 682093 CTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAA 682034 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAAC 284 ||| | ||| |||| | |||| ||| ||| ||||| || || ||||||| || Sbjct 682033 AAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACGACCTAATACTAC 681974 Query 285 GCATCCCCATCGTACACCG 303 ||| | |||| ||| || Sbjct 681973 GCAGGCTCATCAAACAGCG 681955 >seq2630 Length=17387 Score = 89.7 bits (98), Expect = 1e-15 Identities = 132/188 (70%), Gaps = 18/188 (10%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | || ||| || | Sbjct 17382 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCAGATACCGTCAT-----------T 17334 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | || ||| | | |||||||||| || | |||| | ||||| ||| ||||| Sbjct 17333 GC------TTCTTCTCCGAGAAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACGC 17281 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| |||| || ||| |||||| || ||||| |||||||||||||||||| Sbjct 17280 GGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 17221 Query 181 GAGTTTGG 188 |||| ||| Sbjct 17220 GAGTCTGG 17213 >seq224 Length=478311 Score = 89.7 bits (98), Expect = 1e-15 Identities = 112/151 (74%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 81 AAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTC 140 |||||||||| || | |||| | ||||| ||| ||| | | ||| |||| || Sbjct 411172 AAAAGAAGTTCACGACCCGTGGG-CCTTCTACCTCCACATGGCATTGCTCCGTCAGGCTT 411114 Query 141 TCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAG 200 ||| |||||| || ||| | ||||||||||| ||||||||| | | || |||||||| Sbjct 411113 TCGCCCATTGCAGAAAATTTCCTACTGCTGCCTCTCGTAGGAGTCTAGGCCATGTCTCAG 411054 Query 201 TTCCAATGTGGGGGACCTTCCTCTCAGAACC 231 | ||||||||| || | |||||| |||||| Sbjct 411053 TCCCAATGTGGCTGATCATCCTCT-AGAACC 411024 >seq13452 Length=1971 Score = 82.4 bits (90), Expect = 2e-13 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Minus Query 133 TCAGACTCTCGTCCATTGACCAATAT-TCCTCACTGCTGCCTCCCGTAGGAGTTTGGACC 191 |||| || ||| |||||| || || |||| ||||||||||||||||||||| || || Sbjct 433 TCAGGCTTTCGCCCATTGCAGAAAATATCCT-ACTGCTGCCTCCCGTAGGAGTCTGAGCC 375 Query 192 GTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGA 228 |||||| ||||||| ||||| || | ||||||| || Sbjct 374 GTGTCTTAGTTCCAGTGTGGCTGATCATCCTCTCGGA 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067941571904