Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24]
80,317 sequences; 556,480,649 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq50479 107 3e-21
seq45768 107 3e-21
seq14767 107 3e-21
seq1237 107 3e-21
seq65558 104 4e-20
seq135 104 4e-20
seq81 104 4e-20
seq79925 91.5 2e-16
>seq50479
Length=726
Score = 107 bits (118), Expect = 3e-21
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 423 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 480
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||| |||||||| ||||||||||||||||||||||||| || |
Sbjct 481 GGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTA 540
Query 121 G 121
|
Sbjct 541 G 541
>seq45768
Length=783
Score = 107 bits (118), Expect = 3e-21
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 480 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 537
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||| |||||||| ||||||||||||||||||||||||| || |
Sbjct 538 GGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTA 597
Query 121 G 121
|
Sbjct 598 G 598
>seq14767
Length=1824
Score = 107 bits (118), Expect = 3e-21
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 1045 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 1102
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||| |||||||| ||||||||||||||||||||||||| || |
Sbjct 1103 GGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTA 1162
Query 121 G 121
|
Sbjct 1163 G 1163
>seq1237
Length=55097
Score = 107 bits (118), Expect = 3e-21
Identities = 98/121 (81%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 54745 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 54802
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||| |||||||| ||||||||||||||||||||||||| || |
Sbjct 54803 GGCGCGAAGCTACCGTGTGCCGGATTATGACTGAACGCCTCTAAGTCAGAATCCAAGCTA 54862
Query 121 G 121
|
Sbjct 54863 G 54863
>seq65558
Length=594
Score = 104 bits (114), Expect = 4e-20
Identities = 97/121 (80%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 7 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 64
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||| |||||||| ||||| ||||||||||||||||||| || |
Sbjct 65 GGCGCGAAGCTACCGTGTGCCGGATTATGACTGAATGCCTCTAAGTCAGAATCCAAGCTA 124
Query 121 G 121
|
Sbjct 125 G 125
>seq135
Length=732566
Score = 104 bits (114), Expect = 4e-20
Identities = 97/121 (80%), Gaps = 2/121 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 559082 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 559139
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||| |||||||| ||||| ||||||||||||||||||| || |
Sbjct 559140 GGCGCGAAGCTACCGTGTGCCGGATTATGACTGAATGCCTCTAAGTCAGAATCCAAGCTA 559199
Query 121 G 121
|
Sbjct 559200 G 559200
>seq81
Length=1048574
Score = 104 bits (114), Expect = 4e-20
Identities = 97/121 (80%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||| | ||||||| | ||| || ||| || ||||
Sbjct 218444 GTACGAGAGGAACCGTTGA-TTCACAC-AATTGGTCATCGCGCTTGGTTGAAAAGCCAGT 218387
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||||| | ||| |||||||| ||||| ||||||||||||||||||| || |
Sbjct 218386 GGCGCGAAGCTACCGTGTGCCGGATTATGACTGAATGCCTCTAAGTCAGAATCCAAGCTA 218327
Query 121 G 121
|
Sbjct 218326 G 218326
>seq79925
Length=503
Score = 91.5 bits (100), Expect = 2e-16
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88
||||||| | ||| || ||| || ||||| |||||||||||| | ||| |||||||
Sbjct 494 AATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGTGCCGGATTAT 435
Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121
| ||||||||||||||||||||||||| || ||
Sbjct 434 GACTGAACGCCTCTAAGTCAGAATCCAAGCTAG 402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818562604288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |