Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phoenix_20dactylifera_20[refseq_20GCF_5F000413155.1_202013-06-24] 80,317 sequences; 556,480,649 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq226 87.8 2e-12 >seq226 Length=477463 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 162607 GCCTCTAGCGGTATTCTATTCAATCACGAAAGCTCACGCAGAGGAGAGACGTTCGTCACA 162666 |||| | ||| || || ||||| ||||| ||| | || | || |||| |||||||| Sbjct 203783 GCCTGCAACGGCATCCTCTTCAACCACGAGAGCCCCCGTCGCGGGGAGAACTTCGTCACC 203724 Query 162667 CGCAAGATCGTCCGAGCCTTGTCCCGAATTAGTGTGGGACTCCAAAGTGATCTACAACTT 162726 ||||||||| ||| ||| | ||| || | || || ||||| | | || || Sbjct 203723 CGCAAGATCACCCGCGCCGTCGGCCGCATCCGCGTCGGCCTCCAGACCAAGCTTTTCCTC 203664 Query 162727 GGAAACCTCAATGCC-CGACGTGACTGGGGACACGCCAAAGACTACGTAGAGGCTATGTG 162785 || || ||| ||| ||| | |||||||| |||| |||||||| ||||||||||| Sbjct 203663 GGCAATCTCTCCGCCGCGAGG-GACTGGGGGTTCGCCGGTGACTACGTCGAGGCTATGTG 203605 Query 162786 GTTGATGCTTCAGCAAGAGAAGCCAGATGATTATGTGATCGCAACTG 162832 | | ||||| ||||| || |||| | || || || | || |||| Sbjct 203604 GCTCATGCTGCAGCAGGACGAGCCTGGCGACTACGTCGTTGCCACTG 203558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690765000892920