Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1164341 87.8 2e-15 seq1108831 86.0 6e-15 seq895097 86.0 6e-15 seq185608 86.0 6e-15 seq1011921 78.8 9e-13 >seq1164341 Length=319 Score = 87.8 bits (96), Expect = 2e-15 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 227 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 286 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAG 147 |||||| || |||| |||||||||||| ||||| Sbjct 287 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAG 319 >seq1108831 Length=664 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 342 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 283 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| | |||||||||| ||||||| Sbjct 282 GTATAGTGTCTGACACATGCCCGGTGCTGGAAGGT 248 >seq895097 Length=376 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | | ||||||||||||||||||||| ||||||| || | || || Sbjct 254 ATACCAGGGGGTAGTGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 313 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 314 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 348 >seq185608 Length=1583 Score = 86.0 bits (94), Expect = 6e-15 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || | Sbjct 1207 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACAAT 1266 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTA 151 ||||||||| | || ||| |||||||| ||||||||| Sbjct 1267 GTATAGGGTCTAACACCTACCCGGTGCTGGAAGGTTA 1303 >seq1011921 Length=324 Score = 78.8 bits (86), Expect = 9e-13 Identities = 75/96 (78%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 296 ACCAGGCCCAGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 237 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || ||| ||| |||||||| |||||||||||| || Sbjct 236 ATGGGGGCTGATGCCTGCCCAGTGCCGGAAGGTCAA 201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 469494095367