Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq533649 221 2e-55 seq58676 217 2e-54 seq549446 149 1e-33 seq244205 93.3 7e-17 >seq533649 Length=9446 Score = 221 bits (244), Expect = 2e-55 Identities = 142/154 (92%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 ||||| |||||||||||||| ||| ||| |||||||||||| |||||||||||||| Sbjct 6263 CTATTGGTGGGTGAACAATCTAACACTTGGTGAATTCTGCTTCATAATGATAGGAAGAGC 6322 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6323 CGACATCGAATGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 6382 Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTC 241 |||||||||||||||||||| |||||||| |||| Sbjct 6383 TCCCTGTGGTAACTTTTCTGACACCTCTA-CCTC 6415 >seq58676 Length=8738 Score = 217 bits (240), Expect = 2e-54 Identities = 150/169 (89%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAA--CTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 |||||||||||||||||| ||||| | ||||| ||||||||||||| | |||||||||| Sbjct 1008 GTCATCAGTAGGGTAAAAAACTAACATATCTCACGACGGTCTAAACCTAACTCACGTTCC 949 Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 |||| |||||||||||| |||| ||| |||||||||||| |||||||||||||| Sbjct 948 TTATTGGTGGGTGAACAAATCAACACTTGATGAATTCTGCTTCACAATGATAGGAAGAGC 889 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 196 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 888 CCACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCA 840 >seq549446 Length=5003 Score = 149 bits (164), Expect = 1e-33 Identities = 119/142 (84%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 ||||||| || | | | || |||| ||||||||||||||||||||||||| | | |||| Sbjct 1566 GAATTACTATCGCGAC-ACTATCATTAGTAGGGTAAAACTAACCTGTCTCACGGCTGTCT 1508 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||| ||||||||| ||||| |||||||||||| || ||||||||||| Sbjct 1507 AAACCCAGCTCATTTTCCCTATTGGTGGGCGAACAATCCAACAATTGTTGAATTCTGCTT 1448 Query 130 CGGTATGATAGGAAGAGCCGAC 151 | |||||||||||||||||| Sbjct 1447 CACAATGATAGGAAGAGCCGAC 1426 >seq244205 Length=1728 Score = 93.3 bits (102), Expect = 7e-17 Identities = 78/92 (85%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||| ||||||||||||| |||| || ||| |||||||| ||||| ||| Sbjct 220 ATCAGTAGGGTAAA-CTAACCTGTCTCA-CACGGCCT-AACTCAGCTCACATTCCCCATT 276 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTC 124 |||||| |||| ||||||| ||| |||||| Sbjct 277 AGTGGGCGAACTATCCAACACTTTGTGAATTC 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840885895392