Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq979854 104 3e-20 seq1011921 98.7 1e-18 seq1470207 96.9 4e-18 seq130626 96.9 4e-18 seq1108831 95.1 1e-17 seq823204 93.3 5e-17 seq243511 93.3 5e-17 seq1004507 87.8 2e-15 seq998974 87.8 2e-15 seq185608 87.8 2e-15 seq748353 86.0 7e-15 seq362476 84.2 2e-14 >seq979854 Length=343 Score = 104 bits (114), Expect = 3e-20 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||| || |||| || |||||||||| || | | ||||||| ||| Sbjct 127 GGGTCTTTCTGTCCAGGTGCAGGTAGTCCGCATCTTCACAGACATGTCTATTTCACCGAG 186 Query 85 CTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | | | | ||||||| |||||| |||||||| ||| |||||||||| Sbjct 187 C-CTCTCTCCGAGACAGTGCCCAGATCATTACACCTTTCGTGCATGTCAGAACTTACCCA 245 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 246 ACAAGGAATTTCGCTACCTTAGGACCGTTA 275 >seq1011921 Length=324 Score = 98.7 bits (108), Expect = 1e-18 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 43 GCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGN 101 || |||| || |||||||||| | | | ||||||| |||| | | | ||||||| Sbjct 4 GCAGGTAGTCCGCATCTTCACAAACATGTCTATTTCACCGAGC-CTCTCTCCGAGACAGT 62 Query 102 NNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 161 ||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 63 GCCTAGATTGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 122 Query 162 TTAGGACCGTTA 173 |||||||||||| Sbjct 123 TTAGGACCGTTA 134 >seq1470207 Length=301 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 268 TACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 209 Query 173 A 173 | Sbjct 208 A 208 >seq130626 Length=1425 Score = 96.9 bits (106), Expect = 4e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 752 TACGCCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCTCTACCTTAGGACCGTT 693 Query 173 A 173 | Sbjct 692 A 692 >seq1108831 Length=664 Score = 95.1 bits (104), Expect = 1e-17 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || ||||||||| || | | ||||||||| | Sbjct 38 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCATGGAGAATTCAATTTCACCG 97 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || ||| | ||||||| ||||||||||||| |||| | ||||| Sbjct 98 AGTTCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCGTGTAGGTTGCTACTTATGT 157 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||| |||| Sbjct 158 GACAAGGAATTTCGCTACCTTAGGATAGTTA 188 >seq823204 Length=369 Score = 93.3 bits (102), Expect = 5e-17 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 |||||||| |||| || |||| || |||||||||| || | | ||||||||| | Sbjct 262 GGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGG 203 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | || | ||||||| |||||||| ||||||||||| ||||| || Sbjct 202 GTCCATGTCGGAGACAGCGGGGCAATCGTTACACCATACGTGCAGGTCGCTACTTATGCG 143 Query 144 ACAAGGAATTTCGCTACCTTAGGAC 168 | ||||||||||||||||||||||| Sbjct 142 ATAAGGAATTTCGCTACCTTAGGAC 118 >seq243511 Length=5248 Score = 93.3 bits (102), Expect = 5e-17 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 8 TACGCCTTTCGTGCGGGTCGAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 67 Query 173 A 173 | Sbjct 68 A 68 >seq1004507 Length=448 Score = 87.8 bits (96), Expect = 2e-15 Identities = 107/150 (71%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 |||||||| |||| || |||| || ||||||||| | | | ||||||||| | Sbjct 166 GGGGTCTTACCGTCTAGCCGTTGGTACTCCACATCTTCACAAAGAATTCAATTTCACCGG 225 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | || | ||||||| ||||||||| |||||||| | ||||| || Sbjct 226 GTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTTGTGCAGGTTGCTACTTATGCG 285 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||| |||| Sbjct 286 ACAAGGAATTTCGCTACCTTAGGACAGTTA 315 >seq998974 Length=325 Score = 87.8 bits (96), Expect = 2e-15 Identities = 110/154 (71%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTC---CCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCA 79 ||||||||| |||| |||| | ||| || ||||||||| || | | |||||||| Sbjct 251 CGGGGTCTTACCGTCTAGCCATTG---GTACTCCACATCTTCACGGAGAATTCAATTTCA 195 Query 80 CTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTA 139 | | | || | |||| || |||||||||| ||||||||| ||||| Sbjct 194 CCGGGTCCATGTCGGAGATAGCGGGGCAGTCGTTACACCATTCCTGCAGGTCGCTACTTA 135 Query 140 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||| || |||| Sbjct 134 TGCGACAAGGAATTTCGCTACCTTAGAACAGTTA 101 >seq185608 Length=1583 Score = 87.8 bits (96), Expect = 2e-15 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| Sbjct 1421 TACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTT 1362 Query 173 A 173 | Sbjct 1361 A 1361 >seq748353 Length=630 Score = 86.0 bits (94), Expect = 7e-15 Identities = 107/151 (71%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||| |||| || |||| || |||||||||| || | | |||||||| | Sbjct 616 CGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCATCG 557 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | || | ||||| | | |||| ||||||||||||| ||||| | Sbjct 556 GGTCCATGTCGGAGACTGAGGGGTAGTCGTTGCACCTTTCGTGCAGGTCGCTACTTATGC 497 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||| |||||||||||| |||| Sbjct 496 GACAAGGAATTTCACTACCTTAGGACAGTTA 466 >seq362476 Length=2154 Score = 84.2 bits (92), Expect = 2e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| || ||| ||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2097 TACGCCTTTCATGCGAGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATCGTT 2038 Query 173 A 173 | Sbjct 2037 A 2037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 538815371193