Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Secale_20cereale_20[genbank_20GCA_5F900079665.1_202017-02-07] 1,581,707 sequences; 1,684,931,674 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq554169 167 5e-39 seq48609 140 6e-31 seq425426 136 8e-30 seq575282 125 1e-26 seq377884 123 5e-26 seq647475 120 6e-25 seq622046 118 2e-24 seq384462 116 7e-24 seq1309724 111 3e-22 seq558315 109 1e-21 seq926675 107 4e-21 seq243206 107 4e-21 seq661181 105 1e-20 seq360512 105 1e-20 seq1499198 98.7 2e-18 seq1360953 98.7 2e-18 seq316799 96.9 7e-18 seq692256 93.3 8e-17 seq1484280 91.5 3e-16 seq541217 86.0 1e-14 seq1503994 84.2 4e-14 seq1493048 84.2 4e-14 seq656682 73.4 8e-11 seq530846 73.4 8e-11 >seq554169 Length=5018 Score = 167 bits (184), Expect = 5e-39 Identities = 140/172 (81%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| ||||||| | || || | ||||| ||||||||||||||||||| Sbjct 4738 GCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCGCCACTACTGCCTCCCGTAGGAGTCT 4679 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| ||||| | || ||||| |||| ||| Sbjct 4678 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTTGGACCAGCTACTGATCATCGC 4619 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178 |||||| |||||||||| | ||| || |||| | | ||||||||| || || Sbjct 4618 CTTGGTAAGCTATTATCTTAGCAAATAGCTAACCAGACGCGAGCCCCTCCTT 4567 >seq48609 Length=5053 Score = 140 bits (154), Expect = 6e-31 Identities = 127/159 (80%), Gaps = 1/159 (1%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | || || ||| |||||| | || || ||| ||||||||||||||||| Sbjct 3395 GGCATTGCTCCGTCGGGCTTTTGTCCATTGCGGAAAATTCCC-ACTGCTGCCTCCCGTAG 3337 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||| ||||||| |||||| | ||| |||||| | | ||||| ||| Sbjct 3336 GAGTCTGGGCCGTGTCTGAGTCCCAGTGTGGCTGATCATCCTCTCGGACAAGCTACTGAT 3277 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 | ||| |||||| ||||||| ||||| || || ||||| Sbjct 3276 CATCGCCTTGGTAAGCTATTACCTCACAAATTAGCTAAT 3238 >seq425426 Length=1431 Score = 136 bits (150), Expect = 8e-30 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 912 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 971 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 972 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 1031 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||||||| Sbjct 1032 CTTGGTCAGCCTTTACCTGACCAACTACCTAAT 1064 >seq575282 Length=1599 Score = 125 bits (138), Expect = 1e-26 Identities = 131/172 (76%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | |||| |||| ||| ||| || || ||||||||||||||||| ||| Sbjct 71 GGCATTGCTTCGTCAGACTTTCGCCCGTTGCAGAAAATTCCCCACTGCTGCCTCCCATAG 130 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 || | ||||| ||||||||||| | | |||| | ||| |||||| | | ||||| ||| Sbjct 131 GATTTCGGGCCATGTCTCAGTCCGAGTCTGGCTGATCATCCTCTCGGACTAGCTACTGAT 190 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCC 172 | ||| |||||| ||||||| || |||||||| ||||| |||||||| Sbjct 191 CATCGCCTTGGTAAGCTATTACCTGACCAACTAGGTAATCATATGCGAGCCC 242 >seq377884 Length=612 Score = 123 bits (136), Expect = 5e-26 Identities = 119/153 (78%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||| | |||||| Sbjct 146 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTCC 205 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||| ||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 206 GGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 265 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||| ||||| Sbjct 266 CTTGGTCAGCCTTTAACTAACCAACTATCTAAT 298 >seq647475 Length=1349 Score = 120 bits (132), Expect = 6e-25 Identities = 95/114 (83%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| | || || |||| ||||||| | || || ||||||||||||||||||||| Sbjct 180 GGCATTGCTCCGTCGGGCTTTCTCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 121 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCT 114 ||||||||||||||| ||||| ||| |||||| | ||| |||||| | |||||| Sbjct 120 GAGTCTGGGCCGTGTATCAGTACCAGTGTGGCTGATCATCCTCTCGGACCGGCT 67 >seq622046 Length=477 Score = 118 bits (130), Expect = 2e-24 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||| ||||||||| ||||| |||||| Sbjct 83 GCTGGATCGGGCTTTCTCCCATTGTCCAAGATTCCCTACTGCTGCCCCCCGTGGGAGTCC 142 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 | ||||| ||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 143 GTGCCGTATCTCAGTCCCAGTGTGGCTGATCATCCAAAAAGACCAGCTAAGCATCATTGG 202 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 |||||| || ||| || |||||||||| ||| Sbjct 203 CTTGGTCAGCCTTTACCTGACCAACTACCAAAT 235 >seq384462 Length=533 Score = 116 bits (128), Expect = 7e-24 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| | |||| |||||||| | | || ||||||| ||||| ||||| |||||| Sbjct 149 GCTGGATCGTGCTTTCGCCCATTGTCCCAGATTCCCCACTTCTGCCCCCCGTGGGAGTCC 90 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||||||||||||||| |||||| | ||| || || || |||| ||| | || Sbjct 89 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGG 30 Query 127 CTTGGTGGGCTATTATCTCACCAACTACC 155 |||||| || ||| || |||||||||| Sbjct 29 CTTGGTCAGCCTTTACCTGACCAACTACC 1 >seq1309724 Length=340 Score = 111 bits (122), Expect = 3e-22 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 12 ATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCC 71 ||| || |||| |||| ||| ||| | | ||||||||||| ||||| |||||| ||||| Sbjct 144 ATCGGGCTTTCACCCACTGTCCAAGAATCGCCACTGCTGCCACCCGTGGGAGTCCGGGCC 85 Query 72 GTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGG 131 |||||||||||||| |||||| | ||| || || || |||| ||| | ||||||| Sbjct 84 GTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGG 25 Query 132 TGGGCTATTATCTCACCAACTACC 155 | || ||| || |||||||||| Sbjct 24 TCAGCCTTTACCTGACCAACTACC 1 >seq558315 Length=3598 Score = 109 bits (120), Expect = 1e-21 Identities = 81/95 (85%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 4 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 63 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACC 101 ||||||||||||||||||| |||||| | ||| || Sbjct 64 GGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCC 98 >seq926675 Length=429 Score = 107 bits (118), Expect = 4e-21 Identities = 126/169 (75%), Gaps = 1/169 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| |||| |||||||| ||| || | ||||| || | ||| | ||||||| Sbjct 317 GCTGGATCAGGCTTTCGCCCATTGTCCAAGATTCTCCACTACTTGCCCCCATGGGAGTCT 258 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 |||||||||||| |||||| | |||| | ||| || || || |||| ||| | || Sbjct 257 GGGCCGTGTCTCGGTCCCAGTATGGCTGATCATCCCAAAAGACCAGCTAAGCATCATTGG 198 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATC 175 |||||| || ||| || |||||| |||||| | ||| ||| |||| Sbjct 197 CTTGGTCAGCCTTTACCTGACCAACGTCCTAATAGTACGC-AGCTCATC 150 >seq243206 Length=1854 Score = 107 bits (118), Expect = 4e-21 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||||| |||| ||||||| | || || |||||||||||||||||||||||||||||||| Sbjct 911 TCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCA 852 Query 73 TGTCTCAGTCCCAATGTGG 91 ||||||||||||| ||||| Sbjct 851 TGTCTCAGTCCCAGTGTGG 833 >seq661181 Length=561 Score = 105 bits (116), Expect = 1e-20 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 37 ATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTT 96 || |||||||||||||||||||||||||||| ||||||||||||||||| |||||| | | Sbjct 560 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGAGCCGTGTCTCAGTCCCAGTGTGGCTGAT 501 Query 97 CAACCTCTCAGTCCGGCTACCGA 119 || |||||| | || ||||| || Sbjct 500 CATCCTCTCGGACCAGCTACTGA 478 >seq360512 Length=3013 Score = 105 bits (116), Expect = 1e-20 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 2928 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 2987 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGC 92 ||||||||||||||||||| |||||| Sbjct 2988 GGGCCGTGTCTCAGTCCCAGTGTGGC 3013 >seq1499198 Length=2962 Score = 98.7 bits (108), Expect = 2e-18 Identities = 100/129 (78%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 50 GCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTC 109 |||||| ||||||||||||||||||||||| |||| |||||| | ||| |||||| | | Sbjct 1512 GCCTCCAGTAGGAGTCTGGGCCGTGTCTCAACCCCAGTGTGGCTGATCATCCTCTC-GAC 1454 Query 110 CGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAG 169 |||| |||| || |||||| |||||| ||||| ||||| ||||| | || || Sbjct 1453 TAACTACTGATCATCTCCTTGGTAAGCTATTGGCTCACTAACTAGCTAATAAGACGTGAT 1394 Query 170 CCCATCTTT 178 ||| || || Sbjct 1393 CCCCTCCTT 1385 >seq1360953 Length=350 Score = 98.7 bits (108), Expect = 2e-18 Identities = 74/86 (86%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||| | ||| || ||||||||||||| ||||| |||||| Sbjct 86 GCTGGATCGGGCTTTCGCCCATT-TCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 28 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGC 92 ||||||||||||||||||| |||||| Sbjct 27 GGGCCGTGTCTCAGTCCCAGTGTGGC 2 >seq316799 Length=427 Score = 96.9 bits (106), Expect = 7e-18 Identities = 68/78 (87%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 15 AGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTG 74 ||| |||| ||||||| || || ||||| ||||||||||| ||||||||||||||||| Sbjct 79 AGGCTTTCGCCCATTGCAAAAAATTCCCCATTGCTGCCTCCCATAGGAGTCTGGGCCGTG 20 Query 75 TCTCAGTCCCAATGTGGC 92 ||||||||||| |||||| Sbjct 19 TCTCAGTCCCAGTGTGGC 2 >seq692256 Length=918 Score = 93.3 bits (102), Expect = 8e-17 Identities = 54/56 (96%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 37 ATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92 || |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 917 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGC 862 >seq1484280 Length=2972 Score = 91.5 bits (100), Expect = 3e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 ||| | ||||| |||| ||||| | | || || |||||||||||||||| |||| ||||| Sbjct 2696 GCTCCGTCAGGCTTTCGCCCATNGCGGAAAATTCCCCACTGCTGCCTCCTGTAGAAGTCT 2755 Query 67 GGGCCGTGTCTCAGTCCCAATGTGG 91 || ||||||||||||| || ||||| Sbjct 2756 GGACCGTGTCTCAGTCTCAGTGTGG 2780 >seq541217 Length=4444 Score = 86.0 bits (94), Expect = 1e-14 Identities = 107/143 (75%), Gaps = 3/143 (2%) Strand=Plus/Minus Query 17 GGTTTCCC-CCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGT 75 |||||||| |||| | | || || || ||| || |||| |||||||| |||| | ||| Sbjct 1188 GGTTTCCCGCCATCGCGTAAAATGACCTACTTATGGCTCCTGTAGGAGTTTGGGACATGT 1129 Query 76 CTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGG 135 || ||||| |||| | | ||| ||||||| || |||| | || ||| |||||| | Sbjct 1128 CTTGGTCCCGGTGTGTCTGATCATCCTCTCATACCAACTACTGTTCATCGTCTTGGTAG- 1070 Query 136 CTATTAT-CTCACCAACTACCTA 157 ||||| | ||||||||||| ||| Sbjct 1069 CTATTTTTCTCACCAACTAGCTA 1047 >seq1503994 Length=1412 Score = 84.2 bits (92), Expect = 4e-14 Identities = 80/104 (77%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 56 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTA 115 |||||||||||||||||||||||||| ||| |||||| | ||| || || || |||| Sbjct 1412 CGTAGGAGTCTGGGCCGTGTCTCAGTTCCAGTGTGGCTGATCATCCAAAAAGACCAGCTA 1353 Query 116 CCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAAT 159 ||| | |||||||| ||| || |||||||||||||| Sbjct 1352 AGCATCATTGGCTTGGTCNNNNNTTACCTGACCAACTACCTAAT 1309 >seq1493048 Length=4294 Score = 84.2 bits (92), Expect = 4e-14 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || |||| |||||||| ||| || ||||||||||||| ||||| |||||| Sbjct 4224 GCTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCC 4283 Query 67 GGGCCGTGTCT 77 ||||||||||| Sbjct 4284 GGGCCGTGTCT 4294 >seq656682 Length=1043 Score = 73.4 bits (80), Expect = 8e-11 Identities = 67/85 (79%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| ||| || ||| | |||||| ||| || ||||||| ||||| ||| | ||||||| Sbjct 461 GCTGGATCGGGCTTTTGCACATTGTCCAAGATTCCCCACTACTGCCCCCCATGGGAGTCT 402 Query 67 GGGCCGTGTCTCAGTCCCAATGTGG 91 ||||| |||||||| || | || || Sbjct 401 GGGCCATGTCTCAGGCCTAGTGCGG 377 >seq530846 Length=12619 Score = 73.4 bits (80), Expect = 8e-11 Identities = 68/85 (80%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 9 TGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGG 68 || ||| || |||| |||||| | ||| || ||||||| |||| ||| ||| ||||| Sbjct 1363 TGGATCGGGCTTTCACCCATTATCCAAGATTCCCCACTACTGC-TCCTCAAGGTGTCTGA 1305 Query 69 GCCGTGTCTCAGTCCCAATGTGGCC 93 | |||||||||| |||||||||||| Sbjct 1304 GTCGTGTCTCAGCCCCAATGTGGCC 1280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982608237312